RNA–Protein interactions for RNA: ENST00000537304.5

LMO3-215, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 1,685 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-215ENST00000537304 C6orf89Q6UWU4 347 aa12.02□□□□□ -0.49
LMO3-215ENST00000537304 SMYD4Q8IYR2 804 aaPredicted RBP12.02□□□□□ -0.49
LMO3-215ENST00000537304 CCHCR1Q8TD31 782 aa12.02□□□□□ -0.49
LMO3-215ENST00000537304 ARL8AQ96BM9 186 aa12.02□□□□□ -0.49
LMO3-215ENST00000537304 RSRC1Q96IZ7 334 aaKnown RBP12.02□□□□□ -0.49
LMO3-215ENST00000537304 TRIM47Q96LD4 638 aa12.02□□□□□ -0.49
LMO3-215ENST00000537304 RNPC3Q96LT9 517 aaKnown RBP12.02□□□□□ -0.49
LMO3-215ENST00000537304 ERGIC2Q96RQ1 377 aa12.02□□□□□ -0.49
LMO3-215ENST00000537304 PHF20Q9BVI0 1012 aa12.02□□□□□ -0.49
LMO3-215ENST00000537304 CARD10Q9BWT7 1032 aa12.02□□□□□ -0.49
LMO3-215ENST00000537304 IFIH1Q9BYX4 1025 aaKnown RBP12.02□□□□□ -0.49
LMO3-215ENST00000537304 TTYH3Q9C0H2 523 aa12.02□□□□□ -0.49
LMO3-215ENST00000537304 ZSWIM5Q9P217 1185 aa12.02□□□□□ -0.49
LMO3-215ENST00000537304 MACROD2A1Z1Q3 448 aa12.01□□□□□ -0.49
LMO3-215ENST00000537304 PRPF3O43395 683 aaKnown RBP12.01□□□□□ -0.49
LMO3-215ENST00000537304 TNNC1P63316 161 aa12.01□□□□□ -0.49
LMO3-215ENST00000537304 MTMR3Q13615 1198 aa12.01□□□□□ -0.49
LMO3-215ENST00000537304 HSP90AB3PQ58FF7 597 aa12.01□□□□□ -0.49
LMO3-215ENST00000537304 LRRC45Q96CN5 670 aa12.01□□□□□ -0.49
LMO3-215ENST00000537304 HOOK2Q96ED9 719 aa12.01□□□□□ -0.49
LMO3-215ENST00000537304 RRP36Q96EU6 259 aaKnown RBP12.01□□□□□ -0.49
LMO3-215ENST00000537304 CCDC43Q96MW1 224 aaKnown RBP12.01□□□□□ -0.49
LMO3-215ENST00000537304 NOX5Q96PH1 765 aa12.01□□□□□ -0.49
LMO3-215ENST00000537304 STRBPQ96SI9 672 aaKnown RBP12.01□□□□□ -0.49
LMO3-215ENST00000537304 UBAC1Q9BSL1 405 aa12.01□□□□□ -0.49
LMO3-215ENST00000537304 PLA2G12BQ9BX93 195 aa12.01□□□□□ -0.49
LMO3-215ENST00000537304 EDEM3Q9BZQ6 932 aa12.01□□□□□ -0.49
LMO3-215ENST00000537304 TRIM6Q9C030 488 aaPredicted RBP12.01□□□□□ -0.49
LMO3-215ENST00000537304 EHD4Q9H223 541 aa12.01□□□□□ -0.49
LMO3-215ENST00000537304 CUEDC2Q9H467 287 aa12.01□□□□□ -0.49
LMO3-215ENST00000537304 DMGDHQ9UI17 866 aaKnown RBP12.01□□□□□ -0.49
LMO3-215ENST00000537304 MYH13Q9UKX3 1938 aa12.01□□□□□ -0.49
LMO3-215ENST00000537304 PKD1L3Q7Z443 1732 aa12.01□□□□□ -0.49
LMO3-215ENST00000537304 GMNCA6NCL1 334 aa12□□□□□ -0.49
LMO3-215ENST00000537304 E7EVH7 732 aa12□□□□□ -0.49
LMO3-215ENST00000537304 GCOM1H8Y6P7 765 aaPredicted RBP12□□□□□ -0.49
LMO3-215ENST00000537304 ZNF185O15231 689 aa12□□□□□ -0.49
LMO3-215ENST00000537304 PJA2O43164 708 aa12□□□□□ -0.49
LMO3-215ENST00000537304 FGFR1OPO95684 399 aaKnown RBP12□□□□□ -0.49
LMO3-215ENST00000537304 MYZAPP0CAP1 466 aa12□□□□□ -0.49
LMO3-215ENST00000537304 GUCY1A2P33402 732 aa12□□□□□ -0.49
LMO3-215ENST00000537304 TBC1D8BQ0IIM8 1120 aa12□□□□□ -0.49
LMO3-215ENST00000537304 IFT88Q13099 833 aa12□□□□□ -0.49
LMO3-215ENST00000537304 CYB5D1Q6P9G0 228 aa12□□□□□ -0.49
LMO3-215ENST00000537304 CCDC84Q86UT8 332 aaPredicted RBP12□□□□□ -0.49
LMO3-215ENST00000537304 ZNF654Q8IZM8 581 aa12□□□□□ -0.49
LMO3-215ENST00000537304 CACNA2D3Q8IZS8 1091 aa12□□□□□ -0.49
LMO3-215ENST00000537304 TSEN2Q8NCE0 465 aaKnown RBP12□□□□□ -0.49
LMO3-215ENST00000537304 CABLES1Q8TDN4 633 aa12□□□□□ -0.49
LMO3-215ENST00000537304 PCMTD1Q96MG8 357 aaPredicted RBP12□□□□□ -0.49
LMO3-215ENST00000537304 TUBGCP2Q9BSJ2 902 aa12□□□□□ -0.49
LMO3-215ENST00000537304 LACRTQ9GZZ8 138 aa12□□□□□ -0.49
LMO3-215ENST00000537304 NUCKS1Q9H1E3 243 aaKnown RBP12□□□□□ -0.49
LMO3-215ENST00000537304 CD248Q9HCU0 757 aa12□□□□□ -0.49
LMO3-215ENST00000537304 PLCB1Q9NQ66 1216 aa12□□□□□ -0.49
LMO3-215ENST00000537304 PCDHA13Q9Y5I0 950 aa12□□□□□ -0.49
LMO3-215ENST00000537304 ABCB11O95342 1321 aa12□□□□□ -0.49
LMO3-215ENST00000537304 CES2O00748 559 aa12□□□□□ -0.49
LMO3-215ENST00000537304 DNAJC8O75937 253 aaPredicted RBP12□□□□□ -0.49
LMO3-215ENST00000537304 PDE6AP16499 860 aa12□□□□□ -0.49
LMO3-215ENST00000537304 ADORA1P30542 326 aa12□□□□□ -0.49
LMO3-215ENST00000537304 HSPA9P38646 679 aaKnown RBP12□□□□□ -0.49
LMO3-215ENST00000537304 STAT6P42226 847 aa12□□□□□ -0.49
LMO3-215ENST00000537304 PRCPP42785 496 aa12□□□□□ -0.49
LMO3-215ENST00000537304 ATP1A2P50993 1020 aa12□□□□□ -0.49
LMO3-215ENST00000537304 CLNS1AP54105 237 aaKnown RBP12□□□□□ -0.49
LMO3-215ENST00000537304 IFIT5Q13325 482 aaKnown RBP12□□□□□ -0.49
LMO3-215ENST00000537304 XRCC4Q13426 336 aa12□□□□□ -0.49
LMO3-215ENST00000537304 CUL1Q13616 776 aa12□□□□□ -0.49
LMO3-215ENST00000537304 AGBL2Q5U5Z8 902 aa12□□□□□ -0.49
LMO3-215ENST00000537304 CRELD2Q6UXH1 353 aaPredicted RBP12□□□□□ -0.49
LMO3-215ENST00000537304 IFNL3Q8IZI9 196 aa12□□□□□ -0.49
LMO3-215ENST00000537304 CYFIP2Q96F07 1278 aa12□□□□□ -0.49
LMO3-215ENST00000537304 MYL10Q9BUA6 226 aa12□□□□□ -0.49
LMO3-215ENST00000537304 KDM4CQ9H3R0 1056 aa12□□□□□ -0.49
LMO3-215ENST00000537304 CENPHQ9H3R5 247 aa12□□□□□ -0.49
LMO3-215ENST00000537304 TAOK2Q9UL54 1235 aa12□□□□□ -0.49
LMO3-215ENST00000537304 PLAGL2Q9UPG8 496 aa12□□□□□ -0.49
LMO3-215ENST00000537304 ZNF532Q9HCE3 1301 aa11.99□□□□□ -0.49
LMO3-215ENST00000537304 MYH6P13533 1939 aa11.99□□□□□ -0.49
LMO3-215ENST00000537304 RHOBTB3O94955 611 aa11.99□□□□□ -0.49
LMO3-215ENST00000537304 MYCNP04198 464 aaPredicted RBP11.99□□□□□ -0.49
LMO3-215ENST00000537304 GSTA1P08263 222 aa11.99□□□□□ -0.49
LMO3-215ENST00000537304 PAEPP09466 180 aa11.99□□□□□ -0.49
LMO3-215ENST00000537304 CTDSPL2Q05D32 466 aa11.99□□□□□ -0.49
LMO3-215ENST00000537304 MAP3K12Q12852 859 aa11.99□□□□□ -0.49
LMO3-215ENST00000537304 ITGB3BPQ13352 177 aaPredicted RBP11.99□□□□□ -0.49
LMO3-215ENST00000537304 IRF2BP1Q8IU81 584 aa11.99□□□□□ -0.49
LMO3-215ENST00000537304 FUKQ8N0W3 1084 aa11.99□□□□□ -0.49
LMO3-215ENST00000537304 ZNF594Q96JF6 807 aaPredicted RBP11.99□□□□□ -0.49
LMO3-215ENST00000537304 CNOT10Q9H9A5 744 aaKnown RBP11.99□□□□□ -0.49
LMO3-215ENST00000537304 TMBIM4Q9HC24 238 aa11.99□□□□□ -0.49
LMO3-215ENST00000537304 SENP2Q9HC62 589 aa11.99□□□□□ -0.49
LMO3-215ENST00000537304 VPS54Q9P1Q0 977 aa11.99□□□□□ -0.49
LMO3-215ENST00000537304 LRWD1Q9UFC0 647 aa11.99□□□□□ -0.49
LMO3-215ENST00000537304 CCDC189A1A4V9 331 aa11.98□□□□□ -0.49
LMO3-215ENST00000537304 C5orf60A6NFR6 353 aa11.98□□□□□ -0.49
LMO3-215ENST00000537304 ZNF233A6NK53 670 aa11.98□□□□□ -0.49
LMO3-215ENST00000537304 IDH1O75874 414 aaKnown RBP11.98□□□□□ -0.49
LMO3-215ENST00000537304 PCP11498 1178 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms