RNA–Protein interactions for RNA: ENST00000536872.5

COPS7A-205, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-205ENST00000536872 PIGSQ96S52 555 aa22.37■■□□□ 1.17
COPS7A-205ENST00000536872 MAP3K14Q99558 947 aa22.37■■□□□ 1.17
COPS7A-205ENST00000536872 ZBTB43O43298 467 aa22.36■■□□□ 1.17
COPS7A-205ENST00000536872 ZNF792Q3KQV3 632 aa22.36■■□□□ 1.17
COPS7A-205ENST00000536872 LARP6Q9BRS8 491 aaKnown RBP22.36■■□□□ 1.17
COPS7A-205ENST00000536872 HTTP42858 3142 aa22.35■■□□□ 1.17
COPS7A-205ENST00000536872 POTEB2H3BUK9 544 aa22.35■■□□□ 1.17
COPS7A-205ENST00000536872 NFIBO00712 420 aa22.35■■□□□ 1.17
COPS7A-205ENST00000536872 CYTH3O43739 400 aa22.35■■□□□ 1.17
COPS7A-205ENST00000536872 PRKAR2AP13861 404 aaKnown RBP22.35■■□□□ 1.17
COPS7A-205ENST00000536872 GNAQP50148 359 aa22.35■■□□□ 1.17
COPS7A-205ENST00000536872 CNTN2Q02246 1040 aa22.35■■□□□ 1.17
COPS7A-205ENST00000536872 CACNB2Q08289 660 aaPredicted RBP22.35■■□□□ 1.17
COPS7A-205ENST00000536872 MAML3Q96JK9 1138 aa22.35■■□□□ 1.17
COPS7A-205ENST00000536872 LZTS2Q9BRK4 669 aa22.35■■□□□ 1.17
COPS7A-205ENST00000536872 TM6SF1Q9BZW5 370 aa22.35■■□□□ 1.17
COPS7A-205ENST00000536872 RIOX1Q9H6W3 641 aa22.35■■□□□ 1.17
COPS7A-205ENST00000536872 A1CFQ9NQ94 594 aaKnown RBP22.35■■□□□ 1.17
COPS7A-205ENST00000536872 PDRG1Q9NUG6 133 aa22.35■■□□□ 1.17
COPS7A-205ENST00000536872 PNMA2Q9UL42 364 aa22.35■■□□□ 1.17
COPS7A-205ENST00000536872 PTPDC1A2A3K4 754 aa22.34■■□□□ 1.17
COPS7A-205ENST00000536872 POTEFA5A3E0 1075 aa22.34■■□□□ 1.17
COPS7A-205ENST00000536872 GOLGA8AA7E2F4 631 aa22.34■■□□□ 1.17
COPS7A-205ENST00000536872 GOLGA8BA8MQT2 603 aa22.34■■□□□ 1.17
COPS7A-205ENST00000536872 ZBTB5O15062 677 aa22.34■■□□□ 1.17
COPS7A-205ENST00000536872 BAATQ14032 418 aaPredicted RBP22.34■■□□□ 1.17
COPS7A-205ENST00000536872 PRAMEF19Q5SWL8 479 aa22.34■■□□□ 1.17
COPS7A-205ENST00000536872 SRBD1Q8N5C6 995 aaKnown RBP22.34■■□□□ 1.17
COPS7A-205ENST00000536872 CLEC4DQ8WXI8 215 aa22.34■■□□□ 1.17
COPS7A-205ENST00000536872 CALML3P27482 149 aa22.33■■□□□ 1.17
COPS7A-205ENST00000536872 CNGA1P29973 690 aa22.33■■□□□ 1.17
COPS7A-205ENST00000536872 RTN1Q16799 776 aa22.33■■□□□ 1.17
COPS7A-205ENST00000536872 OLFML2BQ68BL8 750 aa22.33■■□□□ 1.17
COPS7A-205ENST00000536872 RRP36Q96EU6 259 aaKnown RBP22.33■■□□□ 1.17
COPS7A-205ENST00000536872 PURBQ96QR8 312 aaKnown RBP22.33■■□□□ 1.17
COPS7A-205ENST00000536872 AMNQ9BXJ7 453 aa22.33■■□□□ 1.17
COPS7A-205ENST00000536872 HMX1Q9NP08 348 aaPredicted RBP22.33■■□□□ 1.17
COPS7A-205ENST00000536872 MYH6P13533 1939 aa22.33■■□□□ 1.16
COPS7A-205ENST00000536872 ABCB11O95342 1321 aa22.32■■□□□ 1.16
COPS7A-205ENST00000536872 DNAJC25-GNG10A0A024R161 153 aa22.32■■□□□ 1.16
COPS7A-205ENST00000536872 hCG_1642624A0A1W2PR95 340 aa22.32■■□□□ 1.16
COPS7A-205ENST00000536872 PPP1R11O60927 126 aaPredicted RBP22.32■■□□□ 1.16
COPS7A-205ENST00000536872 CCND3P30281 292 aaPredicted RBP22.32■■□□□ 1.16
COPS7A-205ENST00000536872 ANAPC15P60006 121 aa22.32■■□□□ 1.16
COPS7A-205ENST00000536872 TBC1D5Q92609 795 aa22.32■■□□□ 1.16
COPS7A-205ENST00000536872 MTMR8Q96EF0 704 aa22.32■■□□□ 1.16
COPS7A-205ENST00000536872 DEFB118Q96PH6 123 aa22.32■■□□□ 1.16
COPS7A-205ENST00000536872 CYP39A1Q9NYL5 469 aa22.32■■□□□ 1.16
COPS7A-205ENST00000536872 DIS3Q9Y2L1 958 aaKnown RBP22.32■■□□□ 1.16
COPS7A-205ENST00000536872 MRPL11Q9Y3B7 192 aaKnown RBP22.32■■□□□ 1.16
COPS7A-205ENST00000536872 PCDHA1Q9Y5I3 950 aa22.32■■□□□ 1.16
COPS7A-205ENST00000536872 PFASO15067 1338 aa22.31■■□□□ 1.16
COPS7A-205ENST00000536872 RPTORQ8N122 1335 aa22.31■■□□□ 1.16
COPS7A-205ENST00000536872 PNMA6FA0A0J9YX94 578 aa22.31■■□□□ 1.16
COPS7A-205ENST00000536872 METAP2P50579 478 aaKnown RBP eCLIP22.31■■□□□ 1.16
COPS7A-205ENST00000536872 RNF207Q6ZRF8 634 aa22.31■■□□□ 1.16
COPS7A-205ENST00000536872 TMTC3Q6ZXV5 915 aa22.31■■□□□ 1.16
COPS7A-205ENST00000536872 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.31■■□□□ 1.16
COPS7A-205ENST00000536872 TINF2Q9BSI4 451 aa22.31■■□□□ 1.16
COPS7A-205ENST00000536872 SPZ1Q9BXG8 430 aa22.31■■□□□ 1.16
COPS7A-205ENST00000536872 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.31■■□□□ 1.16
COPS7A-205ENST00000536872 EN2P19622 333 aaPredicted RBP22.3■■□□□ 1.16
COPS7A-205ENST00000536872 TOB2Q14106 344 aaPredicted RBP22.3■■□□□ 1.16
COPS7A-205ENST00000536872 RBM28Q9NW13 759 aaKnown RBP22.3■■□□□ 1.16
COPS7A-205ENST00000536872 SEC63Q9UGP8 760 aaKnown RBP22.3■■□□□ 1.16
COPS7A-205ENST00000536872 PLXNA1Q9UIW2 1896 aa22.29■■□□□ 1.16
COPS7A-205ENST00000536872 SOWAHBA6NEL2 793 aa22.29■■□□□ 1.16
COPS7A-205ENST00000536872 SMARCA1P28370 1054 aa22.29■■□□□ 1.16
COPS7A-205ENST00000536872 CDC27P30260 824 aa22.29■■□□□ 1.16
COPS7A-205ENST00000536872 ADD1P35611 737 aaKnown RBP22.29■■□□□ 1.16
COPS7A-205ENST00000536872 RPS6P62753 249 aaKnown RBP22.29■■□□□ 1.16
COPS7A-205ENST00000536872 CCT2P78371 535 aaKnown RBP22.29■■□□□ 1.16
COPS7A-205ENST00000536872 MAP3K21Q5TCX8 1036 aa22.29■■□□□ 1.16
COPS7A-205ENST00000536872 SLC30A10Q6XR72 485 aa22.29■■□□□ 1.16
COPS7A-205ENST00000536872 FAM133AQ8N9E0 248 aa22.29■■□□□ 1.16
COPS7A-205ENST00000536872 TRPV1Q8NER1 839 aa22.29■■□□□ 1.16
COPS7A-205ENST00000536872 AGXT2Q9BYV1 514 aa22.29■■□□□ 1.16
COPS7A-205ENST00000536872 DDX49Q9Y6V7 483 aaKnown RBP22.29■■□□□ 1.16
COPS7A-205ENST00000536872 ZNF236Q9UL36 1845 aa22.29■■□□□ 1.16
COPS7A-205ENST00000536872 CENPFP49454 3210 aa22.28■■□□□ 1.16
COPS7A-205ENST00000536872 CFBP00751 764 aa22.28■■□□□ 1.16
COPS7A-205ENST00000536872 TFRCP02786 760 aaKnown RBP22.28■■□□□ 1.16
COPS7A-205ENST00000536872 GJB1P08034 283 aa22.28■■□□□ 1.16
COPS7A-205ENST00000536872 NOL8Q76FK4 1167 aaKnown RBP22.28■■□□□ 1.16
COPS7A-205ENST00000536872 FBXL16Q8N461 479 aa22.28■■□□□ 1.16
COPS7A-205ENST00000536872 FGD4Q96M96 766 aa22.28■■□□□ 1.16
COPS7A-205ENST00000536872 FAM217BQ9NTX9 383 aaPredicted RBP22.28■■□□□ 1.16
COPS7A-205ENST00000536872 PDIA3P30101 505 aaKnown RBP22.27■■□□□ 1.16
COPS7A-205ENST00000536872 TRAF1Q13077 416 aa22.27■■□□□ 1.16
COPS7A-205ENST00000536872 STK3Q13188 491 aa22.27■■□□□ 1.16
COPS7A-205ENST00000536872 MCF2L2Q86YR7 1114 aa22.27■■□□□ 1.16
COPS7A-205ENST00000536872 U2AF1L4Q8WU68 220 aaKnown RBP22.27■■□□□ 1.16
COPS7A-205ENST00000536872 C22orf23Q9BZE7 217 aa22.27■■□□□ 1.16
COPS7A-205ENST00000536872 CNPY2Q9Y2B0 182 aa22.27■■□□□ 1.16
COPS7A-205ENST00000536872 V9GY48 417 aaPredicted RBP22.27■■□□□ 1.16
COPS7A-205ENST00000536872 CCDC196A0A1B0GTZ2 297 aa22.26■■□□□ 1.15
COPS7A-205ENST00000536872 PPFIA3O75145 1194 aa22.26■■□□□ 1.15
COPS7A-205ENST00000536872 IGHA2P01877 340 aa22.26■■□□□ 1.15
COPS7A-205ENST00000536872 NEK4P51957 841 aa22.26■■□□□ 1.15
COPS7A-205ENST00000536872 ANO1Q5XXA6 986 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms