RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 HTTP42858 3142 aa8.63□□□□□ -1.03
YBX3-206ENST00000536823 MANSC4A6NHS7 340 aaPredicted RBP8.62□□□□□ -1.03
YBX3-206ENST00000536823 UQCRFS1P1P0C7P4 283 aa8.62□□□□□ -1.03
YBX3-206ENST00000536823 MCAMP43121 646 aa8.62□□□□□ -1.03
YBX3-206ENST00000536823 TM4SF4P48230 202 aa8.62□□□□□ -1.03
YBX3-206ENST00000536823 IRAK1P51617 712 aa8.62□□□□□ -1.03
YBX3-206ENST00000536823 SFSWAPQ12872 951 aaKnown RBP8.62□□□□□ -1.03
YBX3-206ENST00000536823 MTFR1Q15390 333 aa8.62□□□□□ -1.03
YBX3-206ENST00000536823 SLFNL1Q499Z3 407 aa8.62□□□□□ -1.03
YBX3-206ENST00000536823 LRRC69Q6ZNQ3 347 aa8.62□□□□□ -1.03
YBX3-206ENST00000536823 RAB44Q7Z6P3 723 aaPredicted RBP8.62□□□□□ -1.03
YBX3-206ENST00000536823 PHTF2Q8N3S3 785 aa8.62□□□□□ -1.03
YBX3-206ENST00000536823 SPATA5Q8NB90 893 aa8.62□□□□□ -1.03
YBX3-206ENST00000536823 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.62□□□□□ -1.03
YBX3-206ENST00000536823 FAM151AQ8WW52 585 aa8.62□□□□□ -1.03
YBX3-206ENST00000536823 HOOK2Q96ED9 719 aa8.62□□□□□ -1.03
YBX3-206ENST00000536823 DBNDD2Q9BQY9 259 aa8.62□□□□□ -1.03
YBX3-206ENST00000536823 ABCF2Q9UG63 623 aa8.62□□□□□ -1.03
YBX3-206ENST00000536823 DDX19BQ9UMR2 479 aa8.62□□□□□ -1.03
YBX3-206ENST00000536823 MAST2Q6P0Q8 1798 aa8.62□□□□□ -1.03
YBX3-206ENST00000536823 AK9Q5TCS8 1911 aa8.62□□□□□ -1.03
YBX3-206ENST00000536823 MROH7-TTC4A0A0A0MT08 1334 aa8.61□□□□□ -1.03
YBX3-206ENST00000536823 A6NJY4 79 aa8.61□□□□□ -1.03
YBX3-206ENST00000536823 TXLNAP40222 546 aa8.61□□□□□ -1.03
YBX3-206ENST00000536823 MECOMQ03112 1051 aa8.61□□□□□ -1.03
YBX3-206ENST00000536823 SPEM2Q0P670 501 aa8.61□□□□□ -1.03
YBX3-206ENST00000536823 NFIAQ12857 509 aa8.61□□□□□ -1.03
YBX3-206ENST00000536823 VGLL4Q14135 290 aa8.61□□□□□ -1.03
YBX3-206ENST00000536823 DCAF15Q66K64 600 aa8.61□□□□□ -1.03
YBX3-206ENST00000536823 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.61□□□□□ -1.03
YBX3-206ENST00000536823 ERC1Q8IUD2 1116 aa8.61□□□□□ -1.03
YBX3-206ENST00000536823 ZNF384Q8TF68 577 aa8.61□□□□□ -1.03
YBX3-206ENST00000536823 ZBTB40Q9NUA8 1239 aa8.61□□□□□ -1.03
YBX3-206ENST00000536823 USP40Q9NVE5 1235 aa8.61□□□□□ -1.03
YBX3-206ENST00000536823 DBNLQ9UJU6 430 aaKnown RBP8.61□□□□□ -1.03
YBX3-206ENST00000536823 CSADQ9Y600 493 aa8.61□□□□□ -1.03
YBX3-206ENST00000536823 DOCK2Q92608 1830 aa8.61□□□□□ -1.03
YBX3-206ENST00000536823 ATRNL1Q5VV63 1379 aa8.61□□□□□ -1.03
YBX3-206ENST00000536823 PALM3A6NDB9 673 aaPredicted RBP8.6□□□□□ -1.03
YBX3-206ENST00000536823 HMMRO75330 724 aa8.6□□□□□ -1.03
YBX3-206ENST00000536823 BTDP43251 543 aa8.6□□□□□ -1.03
YBX3-206ENST00000536823 RGS3P49796 1198 aa8.6□□□□□ -1.03
YBX3-206ENST00000536823 INHBEP58166 350 aa8.6□□□□□ -1.03
YBX3-206ENST00000536823 GSTO1P78417 241 aa8.6□□□□□ -1.03
YBX3-206ENST00000536823 TCP10Q12799 353 aa8.6□□□□□ -1.03
YBX3-206ENST00000536823 FZD5Q13467 585 aa8.6□□□□□ -1.03
YBX3-206ENST00000536823 PDE3AQ14432 1141 aa8.6□□□□□ -1.03
YBX3-206ENST00000536823 HSP90AB4PQ58FF6 505 aa8.6□□□□□ -1.03
YBX3-206ENST00000536823 NOM1Q5C9Z4 860 aaKnown RBP8.6□□□□□ -1.03
YBX3-206ENST00000536823 CCDC158Q5M9N0 1113 aa8.6□□□□□ -1.03
YBX3-206ENST00000536823 TTC39AQ5SRH9 613 aa8.6□□□□□ -1.03
YBX3-206ENST00000536823 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.6□□□□□ -1.03
YBX3-206ENST00000536823 NSUN4Q96CB9 384 aaKnown RBP8.6□□□□□ -1.03
YBX3-206ENST00000536823 OPTNQ96CV9 577 aa8.6□□□□□ -1.03
YBX3-206ENST00000536823 ABHD8Q96I13 439 aa8.6□□□□□ -1.03
YBX3-206ENST00000536823 ZNF512BQ96KM6 892 aaPredicted RBP8.6□□□□□ -1.03
YBX3-206ENST00000536823 WRNIP1Q96S55 665 aa8.6□□□□□ -1.03
YBX3-206ENST00000536823 IDI2Q9BXS1 227 aa8.6□□□□□ -1.03
YBX3-206ENST00000536823 CHMP4BQ9H444 224 aaKnown RBP8.6□□□□□ -1.03
YBX3-206ENST00000536823 ELP3Q9H9T3 547 aa8.6□□□□□ -1.03
YBX3-206ENST00000536823 TLR7Q9NYK1 1049 aaKnown RBP8.6□□□□□ -1.03
YBX3-206ENST00000536823 EXOC6BQ9Y2D4 811 aa8.6□□□□□ -1.03
YBX3-206ENST00000536823 SNCAIPQ9Y6H5 919 aa8.6□□□□□ -1.03
YBX3-206ENST00000536823 GPR75-ASB3A0A0A6YYF3 556 aa8.59□□□□□ -1.03
YBX3-206ENST00000536823 IGF2BP3O00425 579 aaKnown RBP eCLIP8.59□□□□□ -1.03
YBX3-206ENST00000536823 ENTPD3O75355 529 aa8.59□□□□□ -1.03
YBX3-206ENST00000536823 WDHD1O75717 1129 aaPredicted RBP8.59□□□□□ -1.03
YBX3-206ENST00000536823 MAP4K4O95819 1239 aaPredicted RBP8.59□□□□□ -1.03
YBX3-206ENST00000536823 LDHCP07864 332 aa8.59□□□□□ -1.03
YBX3-206ENST00000536823 RHBDL3P58872 404 aa8.59□□□□□ -1.03
YBX3-206ENST00000536823 C20orf194Q5TEA3 1177 aa8.59□□□□□ -1.03
YBX3-206ENST00000536823 SIRT2Q8IXJ6 389 aa8.59□□□□□ -1.03
YBX3-206ENST00000536823 RPAP2Q8IXW5 612 aaPredicted RBP8.59□□□□□ -1.03
YBX3-206ENST00000536823 FMR1NBQ8N0W7 255 aaPredicted RBP8.59□□□□□ -1.03
YBX3-206ENST00000536823 EAF2Q96CJ1 260 aaPredicted RBP8.59□□□□□ -1.03
YBX3-206ENST00000536823 ZNF341Q9BYN7 854 aa8.59□□□□□ -1.03
YBX3-206ENST00000536823 MCOLN1Q9GZU1 580 aa8.59□□□□□ -1.03
YBX3-206ENST00000536823 NEUROD4Q9HD90 331 aa8.59□□□□□ -1.03
YBX3-206ENST00000536823 RAI14Q9P0K7 980 aa8.59□□□□□ -1.03
YBX3-206ENST00000536823 MYO5AQ9Y4I1 1855 aaKnown RBP8.59□□□□□ -1.03
YBX3-206ENST00000536823 COL2A1P02458 1487 aaPredicted RBP8.58□□□□□ -1.04
YBX3-206ENST00000536823 IGSF3O75054 1194 aa8.58□□□□□ -1.04
YBX3-206ENST00000536823 TBC1D8O95759 1140 aa8.58□□□□□ -1.04
YBX3-206ENST00000536823 CYP2E1P05181 493 aaPredicted RBP8.58□□□□□ -1.04
YBX3-206ENST00000536823 INPP5BP32019 993 aa8.58□□□□□ -1.04
YBX3-206ENST00000536823 ZAP70P43403 619 aa8.58□□□□□ -1.04
YBX3-206ENST00000536823 DGKZQ13574 1117 aa8.58□□□□□ -1.04
YBX3-206ENST00000536823 AACSQ86V21 672 aa8.58□□□□□ -1.04
YBX3-206ENST00000536823 ERO1BQ86YB8 467 aa8.58□□□□□ -1.04
YBX3-206ENST00000536823 ZFPM1Q8IX07 1006 aa8.58□□□□□ -1.04
YBX3-206ENST00000536823 CCDC8Q9H0W5 538 aaPredicted RBP8.58□□□□□ -1.04
YBX3-206ENST00000536823 JPH1Q9HDC5 661 aaPredicted RBP8.58□□□□□ -1.04
YBX3-206ENST00000536823 DDX4Q9NQI0 724 aaKnown RBP8.58□□□□□ -1.04
YBX3-206ENST00000536823 LRP2BPQ9P2M1 347 aa8.58□□□□□ -1.04
YBX3-206ENST00000536823 ZNF112Q9UJU3 913 aa8.58□□□□□ -1.04
YBX3-206ENST00000536823 TMEM229AB2RXF0 380 aa8.57□□□□□ -1.04
YBX3-206ENST00000536823 ATP9BO43861 1147 aa8.57□□□□□ -1.04
YBX3-206ENST00000536823 SSTR4P31391 388 aa8.57□□□□□ -1.04
YBX3-206ENST00000536823 GTF2A2P52657 109 aa8.57□□□□□ -1.04
YBX3-206ENST00000536823 PPIL2Q13356 520 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms