RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 NOL8Q76FK4 1167 aaKnown RBP23.23■■□□□ 1.31
TNFRSF1B-204ENST00000536782 CCPG1Q9ULG6 757 aa23.23■■□□□ 1.31
TNFRSF1B-204ENST00000536782 A0A0U1RQG5 324 aaPredicted RBP23.22■■□□□ 1.31
TNFRSF1B-204ENST00000536782 TIMP1P01033 207 aa23.22■■□□□ 1.31
TNFRSF1B-204ENST00000536782 HSPD1P10809 573 aaKnown RBP23.22■■□□□ 1.31
TNFRSF1B-204ENST00000536782 NKX3-2P78367 333 aa23.22■■□□□ 1.31
TNFRSF1B-204ENST00000536782 SEMA6BQ9H3T3 888 aa23.22■■□□□ 1.31
TNFRSF1B-204ENST00000536782 CYP39A1Q9NYL5 469 aa23.22■■□□□ 1.31
TNFRSF1B-204ENST00000536782 TBX21Q9UL17 535 aa23.22■■□□□ 1.31
TNFRSF1B-204ENST00000536782 LCTP09848 1927 aa23.21■■□□□ 1.31
TNFRSF1B-204ENST00000536782 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.21■■□□□ 1.31
TNFRSF1B-204ENST00000536782 TRIM6-TRIM34B2RNG4 842 aa23.21■■□□□ 1.31
TNFRSF1B-204ENST00000536782 ARVCFO00192 962 aa23.21■■□□□ 1.31
TNFRSF1B-204ENST00000536782 CTAGE5O15320 804 aa23.21■■□□□ 1.31
TNFRSF1B-204ENST00000536782 ICAM1P05362 532 aa23.21■■□□□ 1.31
TNFRSF1B-204ENST00000536782 TOP1P11387 765 aaKnown RBP23.21■■□□□ 1.31
TNFRSF1B-204ENST00000536782 NMIQ13287 307 aaPredicted RBP23.21■■□□□ 1.31
TNFRSF1B-204ENST00000536782 AAMPQ13685 434 aa23.21■■□□□ 1.31
TNFRSF1B-204ENST00000536782 NSMFQ6X4W1 530 aa23.21■■□□□ 1.31
TNFRSF1B-204ENST00000536782 TMEM47Q9BQJ4 181 aa23.21■■□□□ 1.31
TNFRSF1B-204ENST00000536782 LNPKQ9C0E8 428 aa23.21■■□□□ 1.31
TNFRSF1B-204ENST00000536782 TCP11L1Q9NUJ3 509 aa23.21■■□□□ 1.31
TNFRSF1B-204ENST00000536782 ZMYM6O95789 1325 aa23.21■■□□□ 1.31
TNFRSF1B-204ENST00000536782 SLC16A2P36021 539 aa23.2■■□□□ 1.3
TNFRSF1B-204ENST00000536782 BEX3Q00994 111 aa23.2■■□□□ 1.3
TNFRSF1B-204ENST00000536782 TTBK2Q6IQ55 1244 aa23.2■■□□□ 1.3
TNFRSF1B-204ENST00000536782 BTNL9Q6UXG8 535 aa23.2■■□□□ 1.3
TNFRSF1B-204ENST00000536782 ZNF589Q86UQ0 364 aaPredicted RBP23.2■■□□□ 1.3
TNFRSF1B-204ENST00000536782 CDX2Q99626 313 aaPredicted RBP23.2■■□□□ 1.3
TNFRSF1B-204ENST00000536782 RANBP17Q9H2T7 1088 aaKnown RBP23.2■■□□□ 1.3
TNFRSF1B-204ENST00000536782 GNEQ9Y223 722 aaKnown RBP23.2■■□□□ 1.3
TNFRSF1B-204ENST00000536782 ASTN1O14525 1302 aa23.19■■□□□ 1.3
TNFRSF1B-204ENST00000536782 CCDC171Q6TFL3 1326 aa23.19■■□□□ 1.3
TNFRSF1B-204ENST00000536782 SYDE2Q5VT97 1194 aa23.19■■□□□ 1.3
TNFRSF1B-204ENST00000536782 MFSD5Q6N075 450 aa23.19■■□□□ 1.3
TNFRSF1B-204ENST00000536782 TLK2Q86UE8 772 aa23.19■■□□□ 1.3
TNFRSF1B-204ENST00000536782 RILPL2Q969X0 211 aa23.19■■□□□ 1.3
TNFRSF1B-204ENST00000536782 AP5M1Q9H0R1 490 aa23.19■■□□□ 1.3
TNFRSF1B-204ENST00000536782 TTYH1Q9H313 450 aaPredicted RBP23.19■■□□□ 1.3
TNFRSF1B-204ENST00000536782 LRRC37A2A6NM11 1700 aa23.19■■□□□ 1.3
TNFRSF1B-204ENST00000536782 TTC28Q96AY4 2481 aa23.18■■□□□ 1.3
TNFRSF1B-204ENST00000536782 TLR3O15455 904 aaKnown RBP23.18■■□□□ 1.3
TNFRSF1B-204ENST00000536782 HAND2P61296 217 aa23.18■■□□□ 1.3
TNFRSF1B-204ENST00000536782 IQSEC1Q6DN90 963 aa23.18■■□□□ 1.3
TNFRSF1B-204ENST00000536782 MFSD6Q6ZSS7 791 aa23.18■■□□□ 1.3
TNFRSF1B-204ENST00000536782 EEPD1Q7L9B9 569 aa23.18■■□□□ 1.3
TNFRSF1B-204ENST00000536782 FAM126BQ8IXS8 530 aa23.18■■□□□ 1.3
TNFRSF1B-204ENST00000536782 RWDD1Q9H446 243 aaPredicted RBP23.18■■□□□ 1.3
TNFRSF1B-204ENST00000536782 GPCPD1Q9NPB8 672 aa23.18■■□□□ 1.3
TNFRSF1B-204ENST00000536782 DDX49Q9Y6V7 483 aaKnown RBP23.18■■□□□ 1.3
TNFRSF1B-204ENST00000536782 FRMPD2Q68DX3 1309 aaPredicted RBP23.17■■□□□ 1.3
TNFRSF1B-204ENST00000536782 CABYRO75952 493 aa23.17■■□□□ 1.3
TNFRSF1B-204ENST00000536782 PCP11498 1178 aaKnown RBP23.17■■□□□ 1.3
TNFRSF1B-204ENST00000536782 SMPD1P17405 629 aa23.17■■□□□ 1.3
TNFRSF1B-204ENST00000536782 MFAP1P55081 439 aaKnown RBP23.17■■□□□ 1.3
TNFRSF1B-204ENST00000536782 FSCN1Q16658 493 aaKnown RBP23.17■■□□□ 1.3
TNFRSF1B-204ENST00000536782 AKNAD1Q5T1N1 836 aa23.17■■□□□ 1.3
TNFRSF1B-204ENST00000536782 FBXO16Q8IX29 292 aaPredicted RBP23.17■■□□□ 1.3
TNFRSF1B-204ENST00000536782 SMC5Q8IY18 1101 aa23.17■■□□□ 1.3
TNFRSF1B-204ENST00000536782 TTC14Q96N46 770 aa23.17■■□□□ 1.3
TNFRSF1B-204ENST00000536782 PDGFCQ9NRA1 345 aa23.17■■□□□ 1.3
TNFRSF1B-204ENST00000536782 SPTBN5Q9NRC6 3674 aaKnown RBP23.17■■□□□ 1.3
TNFRSF1B-204ENST00000536782 CHD9Q3L8U1 2897 aa23.16■■□□□ 1.3
TNFRSF1B-204ENST00000536782 TMEM265A0A087WTH1 108 aa23.16■■□□□ 1.3
TNFRSF1B-204ENST00000536782 DYNC1LI2O43237 492 aaPredicted RBP23.16■■□□□ 1.3
TNFRSF1B-204ENST00000536782 ZEB2O60315 1214 aa23.16■■□□□ 1.3
TNFRSF1B-204ENST00000536782 PPIGQ13427 754 aaKnown RBP eCLIP23.16■■□□□ 1.3
TNFRSF1B-204ENST00000536782 B4GALNT3Q6L9W6 998 aa23.16■■□□□ 1.3
TNFRSF1B-204ENST00000536782 TAPT1Q6NXT6 567 aa23.16■■□□□ 1.3
TNFRSF1B-204ENST00000536782 CXCL17Q6UXB2 119 aa23.16■■□□□ 1.3
TNFRSF1B-204ENST00000536782 TMEM199Q8N511 208 aa23.16■■□□□ 1.3
TNFRSF1B-204ENST00000536782 MORC4Q8TE76 937 aa23.16■■□□□ 1.3
TNFRSF1B-204ENST00000536782 PURBQ96QR8 312 aaKnown RBP23.16■■□□□ 1.3
TNFRSF1B-204ENST00000536782 VTA1Q9NP79 307 aa23.16■■□□□ 1.3
TNFRSF1B-204ENST00000536782 ADD3Q9UEY8 706 aaKnown RBP23.16■■□□□ 1.3
TNFRSF1B-204ENST00000536782 Q9Y3F1 56 aa23.16■■□□□ 1.3
TNFRSF1B-204ENST00000536782 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.15■■□□□ 1.3
TNFRSF1B-204ENST00000536782 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.15■■□□□ 1.3
TNFRSF1B-204ENST00000536782 PDHBP11177 359 aa23.15■■□□□ 1.3
TNFRSF1B-204ENST00000536782 SDSP20132 328 aa23.15■■□□□ 1.3
TNFRSF1B-204ENST00000536782 BAATQ14032 418 aaPredicted RBP23.15■■□□□ 1.3
TNFRSF1B-204ENST00000536782 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.15■■□□□ 1.3
TNFRSF1B-204ENST00000536782 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.15■■□□□ 1.3
TNFRSF1B-204ENST00000536782 COL25A1Q9BXS0 654 aaPredicted RBP23.15■■□□□ 1.3
TNFRSF1B-204ENST00000536782 RNF41Q9H4P4 317 aaPredicted RBP23.15■■□□□ 1.3
TNFRSF1B-204ENST00000536782 PNMA2Q9UL42 364 aa23.15■■□□□ 1.3
TNFRSF1B-204ENST00000536782 NFIBO00712 420 aa23.14■■□□□ 1.29
TNFRSF1B-204ENST00000536782 CD4P01730 458 aa23.14■■□□□ 1.29
TNFRSF1B-204ENST00000536782 KIAA1211Q6ZU35 1233 aa23.14■■□□□ 1.29
TNFRSF1B-204ENST00000536782 CHD1LQ86WJ1 897 aa23.14■■□□□ 1.29
TNFRSF1B-204ENST00000536782 TBC1D10CQ8IV04 446 aa23.14■■□□□ 1.29
TNFRSF1B-204ENST00000536782 SLC43A3Q8NBI5 491 aa23.14■■□□□ 1.29
TNFRSF1B-204ENST00000536782 PPP1R12CQ9BZL4 782 aa23.14■■□□□ 1.29
TNFRSF1B-204ENST00000536782 LOC102724159A0A0B4J2E5 919 aa23.13■■□□□ 1.29
TNFRSF1B-204ENST00000536782 PTPDC1A2A3K4 754 aa23.13■■□□□ 1.29
TNFRSF1B-204ENST00000536782 CSF2RAP15509 400 aa23.13■■□□□ 1.29
TNFRSF1B-204ENST00000536782 PTGS1P23219 599 aa23.13■■□□□ 1.29
TNFRSF1B-204ENST00000536782 ALDH5A1P51649 535 aaPredicted RBP23.13■■□□□ 1.29
TNFRSF1B-204ENST00000536782 ZNF543Q08ER8 600 aa23.13■■□□□ 1.29
TNFRSF1B-204ENST00000536782 ITGA7Q13683 1181 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms