RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 TIMP1P01033 207 aa14.66□□□□□ -0.06
PRKDC-207ENST00000536483 ASGR1P07306 291 aa14.66□□□□□ -0.06
PRKDC-207ENST00000536483 FOSL2P15408 326 aa14.66□□□□□ -0.06
PRKDC-207ENST00000536483 CST5P28325 142 aaPredicted RBP14.66□□□□□ -0.06
PRKDC-207ENST00000536483 CENPQQ7L2Z9 268 aaPredicted RBP14.66□□□□□ -0.06
PRKDC-207ENST00000536483 FAM160B2Q86V87 743 aa14.66□□□□□ -0.06
PRKDC-207ENST00000536483 TBC1D10CQ8IV04 446 aa14.66□□□□□ -0.06
PRKDC-207ENST00000536483 PCSK9Q8NBP7 692 aaKnown RBP14.66□□□□□ -0.06
PRKDC-207ENST00000536483 CHURC1Q8WUH1 139 aa14.66□□□□□ -0.06
PRKDC-207ENST00000536483 ANKS1AQ92625 1134 aa14.66□□□□□ -0.06
PRKDC-207ENST00000536483 VTI1AQ96AJ9 217 aa14.66□□□□□ -0.06
PRKDC-207ENST00000536483 CHMP4CQ96CF2 233 aa14.66□□□□□ -0.06
PRKDC-207ENST00000536483 IL25Q9H293 177 aa14.66□□□□□ -0.06
PRKDC-207ENST00000536483 SPC25Q9HBM1 224 aa14.66□□□□□ -0.06
PRKDC-207ENST00000536483 TBX21Q9UL17 535 aa14.66□□□□□ -0.06
PRKDC-207ENST00000536483 ISY1Q9ULR0 285 aaKnown RBP14.66□□□□□ -0.06
PRKDC-207ENST00000536483 MYH4Q9Y623 1939 aa14.66□□□□□ -0.06
PRKDC-207ENST00000536483 ELP1O95163 1332 aa14.66□□□□□ -0.06
PRKDC-207ENST00000536483 TMEM265A0A087WTH1 108 aa14.65□□□□□ -0.06
PRKDC-207ENST00000536483 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.65□□□□□ -0.06
PRKDC-207ENST00000536483 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.65□□□□□ -0.06
PRKDC-207ENST00000536483 TMEM232C9JQI7 657 aa14.65□□□□□ -0.06
PRKDC-207ENST00000536483 NMT2O60551 498 aa14.65□□□□□ -0.06
PRKDC-207ENST00000536483 TOP1P11387 765 aaKnown RBP14.65□□□□□ -0.06
PRKDC-207ENST00000536483 CDK7P50613 346 aa14.65□□□□□ -0.06
PRKDC-207ENST00000536483 GJA9P57773 515 aa14.65□□□□□ -0.06
PRKDC-207ENST00000536483 CNTN2Q02246 1040 aa14.65□□□□□ -0.06
PRKDC-207ENST00000536483 GNASQ5JWF2 1037 aa14.65□□□□□ -0.06
PRKDC-207ENST00000536483 BTNL9Q6UXG8 535 aa14.65□□□□□ -0.06
PRKDC-207ENST00000536483 DGKHQ86XP1 1220 aa14.65□□□□□ -0.06
PRKDC-207ENST00000536483 CCDC144CPQ8IYA2 1237 aa14.65□□□□□ -0.06
PRKDC-207ENST00000536483 RUFY2Q8WXA3 655 aa14.65□□□□□ -0.06
PRKDC-207ENST00000536483 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.65□□□□□ -0.06
PRKDC-207ENST00000536483 KATNBL1Q9H079 304 aa14.65□□□□□ -0.06
PRKDC-207ENST00000536483 UPF3AQ9H1J1 476 aaKnown RBP14.65□□□□□ -0.06
PRKDC-207ENST00000536483 STX8Q9UNK0 236 aa14.65□□□□□ -0.06
PRKDC-207ENST00000536483 MROH7Q68CQ1 1323 aa14.65□□□□□ -0.06
PRKDC-207ENST00000536483 ARVCFO00192 962 aa14.64□□□□□ -0.07
PRKDC-207ENST00000536483 SNHG28P0DPA3 235 aa14.64□□□□□ -0.07
PRKDC-207ENST00000536483 DNAJB2P25686 324 aa14.64□□□□□ -0.07
PRKDC-207ENST00000536483 SLC1A4P43007 532 aa14.64□□□□□ -0.07
PRKDC-207ENST00000536483 HAND2P61296 217 aa14.64□□□□□ -0.07
PRKDC-207ENST00000536483 GRIN2CQ14957 1233 aa14.64□□□□□ -0.07
PRKDC-207ENST00000536483 CCDC178Q5BJE1 867 aa14.64□□□□□ -0.07
PRKDC-207ENST00000536483 MFSD5Q6N075 450 aa14.64□□□□□ -0.07
PRKDC-207ENST00000536483 DCAF4Q8WV16 495 aa14.64□□□□□ -0.07
PRKDC-207ENST00000536483 ESR2Q92731 530 aa14.64□□□□□ -0.07
PRKDC-207ENST00000536483 AGBL1Q96MI9 1066 aa14.64□□□□□ -0.07
PRKDC-207ENST00000536483 TMEM47Q9BQJ4 181 aa14.64□□□□□ -0.07
PRKDC-207ENST00000536483 ACAD9Q9H845 621 aa14.64□□□□□ -0.07
PRKDC-207ENST00000536483 A1CFQ9NQ94 594 aaKnown RBP14.64□□□□□ -0.07
PRKDC-207ENST00000536483 ZNF536O15090 1300 aa14.64□□□□□ -0.07
PRKDC-207ENST00000536483 MCM3APO60318 1980 aa14.64□□□□□ -0.07
PRKDC-207ENST00000536483 A0A0U1RQG5 324 aaPredicted RBP14.63□□□□□ -0.07
PRKDC-207ENST00000536483 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.63□□□□□ -0.07
PRKDC-207ENST00000536483 CTAGE5O15320 804 aa14.63□□□□□ -0.07
PRKDC-207ENST00000536483 SGSM2O43147 1006 aa14.63□□□□□ -0.07
PRKDC-207ENST00000536483 MCCP23508 829 aa14.63□□□□□ -0.07
PRKDC-207ENST00000536483 STAT2P52630 851 aa14.63□□□□□ -0.07
PRKDC-207ENST00000536483 BEX3Q00994 111 aa14.63□□□□□ -0.07
PRKDC-207ENST00000536483 IKQ13123 557 aaPredicted RBP14.63□□□□□ -0.07
PRKDC-207ENST00000536483 IMMTQ16891 758 aaKnown RBP14.63□□□□□ -0.07
PRKDC-207ENST00000536483 C16orf59Q7L2K0 433 aa14.63□□□□□ -0.07
PRKDC-207ENST00000536483 FAM133AQ8N9E0 248 aa14.63□□□□□ -0.07
PRKDC-207ENST00000536483 PPP1R12CQ9BZL4 782 aa14.63□□□□□ -0.07
PRKDC-207ENST00000536483 RNF146Q9NTX7 359 aa14.63□□□□□ -0.07
PRKDC-207ENST00000536483 SOWAHBA6NEL2 793 aa14.62□□□□□ -0.07
PRKDC-207ENST00000536483 CSF2RAP15509 400 aa14.62□□□□□ -0.07
PRKDC-207ENST00000536483 SNAP25P60880 206 aa14.62□□□□□ -0.07
PRKDC-207ENST00000536483 TNFAIP2Q03169 654 aa14.62□□□□□ -0.07
PRKDC-207ENST00000536483 PPIGQ13427 754 aaKnown RBP eCLIP14.62□□□□□ -0.07
PRKDC-207ENST00000536483 TMEM240Q5SV17 173 aa14.62□□□□□ -0.07
PRKDC-207ENST00000536483 KCTD1Q719H9 257 aa14.62□□□□□ -0.07
PRKDC-207ENST00000536483 NOL8Q76FK4 1167 aaKnown RBP14.62□□□□□ -0.07
PRKDC-207ENST00000536483 FAM126BQ8IXS8 530 aa14.62□□□□□ -0.07
PRKDC-207ENST00000536483 TRERF1Q96PN7 1200 aa14.62□□□□□ -0.07
PRKDC-207ENST00000536483 CNNM2Q9H8M5 875 aa14.62□□□□□ -0.07
PRKDC-207ENST00000536483 DDX49Q9Y6V7 483 aaKnown RBP14.62□□□□□ -0.07
PRKDC-207ENST00000536483 NEDD4P46934 1319 aa14.62□□□□□ -0.07
PRKDC-207ENST00000536483 GRXCR1A8MXD5 290 aa14.61□□□□□ -0.07
PRKDC-207ENST00000536483 TLR3O15455 904 aaKnown RBP14.61□□□□□ -0.07
PRKDC-207ENST00000536483 ACRP10323 421 aa14.61□□□□□ -0.07
PRKDC-207ENST00000536483 ALAS1P13196 640 aa14.61□□□□□ -0.07
PRKDC-207ENST00000536483 PTGS1P23219 599 aa14.61□□□□□ -0.07
PRKDC-207ENST00000536483 NKX3-2P78367 333 aa14.61□□□□□ -0.07
PRKDC-207ENST00000536483 TKFCQ3LXA3 575 aa14.61□□□□□ -0.07
PRKDC-207ENST00000536483 RRP12Q5JTH9 1297 aaKnown RBP14.61□□□□□ -0.07
PRKDC-207ENST00000536483 CCDC174Q6PII3 467 aa14.61□□□□□ -0.07
PRKDC-207ENST00000536483 CXCL17Q6UXB2 119 aa14.61□□□□□ -0.07
PRKDC-207ENST00000536483 RASGRP2Q7LDG7 609 aa14.61□□□□□ -0.07
PRKDC-207ENST00000536483 TMEM199Q8N511 208 aa14.61□□□□□ -0.07
PRKDC-207ENST00000536483 MAP4K1Q92918 833 aa14.61□□□□□ -0.07
PRKDC-207ENST00000536483 TIFAQ96CG3 184 aa14.61□□□□□ -0.07
PRKDC-207ENST00000536483 KRT23Q9C075 422 aa14.61□□□□□ -0.07
PRKDC-207ENST00000536483 ZNF576Q9H609 170 aa14.61□□□□□ -0.07
PRKDC-207ENST00000536483 TOMM22Q9NS69 142 aa14.61□□□□□ -0.07
PRKDC-207ENST00000536483 ASTN1O14525 1302 aa14.61□□□□□ -0.07
PRKDC-207ENST00000536483 ASB14A6NK59 587 aa14.6□□□□□ -0.07
PRKDC-207ENST00000536483 PDHBP11177 359 aa14.6□□□□□ -0.07
PRKDC-207ENST00000536483 PBX2P40425 430 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms