RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 SPATC1LQ9H0A9 340 aa18.69■□□□□ 0.58
VAMP1-205ENST00000535927 ZMYND12Q9H0C1 365 aa18.69■□□□□ 0.58
VAMP1-205ENST00000535927 CPVLQ9H3G5 476 aa18.69■□□□□ 0.58
VAMP1-205ENST00000535927 MROH8Q9H579 483 aa18.69■□□□□ 0.58
VAMP1-205ENST00000535927 BRMS1Q9HCU9 246 aa18.69■□□□□ 0.58
VAMP1-205ENST00000535927 C6orf50Q9HD87 102 aa18.69■□□□□ 0.58
VAMP1-205ENST00000535927 SAGE1Q9NXZ1 904 aa18.69■□□□□ 0.58
VAMP1-205ENST00000535927 RBPJLQ9UBG7 517 aa18.69■□□□□ 0.58
VAMP1-205ENST00000535927 CCPG1Q9ULG6 757 aa18.69■□□□□ 0.58
VAMP1-205ENST00000535927 CIZ1Q9ULV3 898 aaPredicted RBP18.69■□□□□ 0.58
VAMP1-205ENST00000535927 ZNF536O15090 1300 aa18.69■□□□□ 0.58
VAMP1-205ENST00000535927 A0A0G2JMZ2 1700 aa18.69■□□□□ 0.58
VAMP1-205ENST00000535927 THSD7BQ9C0I4 1608 aa18.68■□□□□ 0.58
VAMP1-205ENST00000535927 GHRHRQ02643 423 aa18.68■□□□□ 0.58
VAMP1-205ENST00000535927 TMEM132BQ14DG7 1078 aa18.68■□□□□ 0.58
VAMP1-205ENST00000535927 HEATR3Q7Z4Q2 680 aa18.68■□□□□ 0.58
VAMP1-205ENST00000535927 STXBP3O00186 592 aa18.67■□□□□ 0.58
VAMP1-205ENST00000535927 STRNO43815 780 aa18.67■□□□□ 0.58
VAMP1-205ENST00000535927 NAPAP54920 295 aa18.67■□□□□ 0.58
VAMP1-205ENST00000535927 ERVK-9P63128 1117 aa18.67■□□□□ 0.58
VAMP1-205ENST00000535927 ERVK-24P63145 666 aa18.67■□□□□ 0.58
VAMP1-205ENST00000535927 WWC2Q6AWC2 1192 aa18.67■□□□□ 0.58
VAMP1-205ENST00000535927 DAGLBQ8NCG7 672 aa18.67■□□□□ 0.58
VAMP1-205ENST00000535927 ADGRA2Q96PE1 1338 aa18.67■□□□□ 0.58
VAMP1-205ENST00000535927 COL11A1P12107 1806 aaPredicted RBP18.67■□□□□ 0.58
VAMP1-205ENST00000535927 H3BQV1 296 aa18.66■□□□□ 0.58
VAMP1-205ENST00000535927 PIK3CDO00329 1044 aa18.66■□□□□ 0.58
VAMP1-205ENST00000535927 AOC2O75106 756 aa18.66■□□□□ 0.58
VAMP1-205ENST00000535927 FOSP01100 380 aaPredicted RBP18.66■□□□□ 0.58
VAMP1-205ENST00000535927 CYP2C8P10632 490 aa18.66■□□□□ 0.58
VAMP1-205ENST00000535927 NUCB2P80303 420 aa18.66■□□□□ 0.58
VAMP1-205ENST00000535927 SNRNP48Q6IEG0 339 aaKnown RBP18.66■□□□□ 0.58
VAMP1-205ENST00000535927 CCDC174Q6PII3 467 aa18.66■□□□□ 0.58
VAMP1-205ENST00000535927 C17orf99Q6UX52 265 aa18.66■□□□□ 0.58
VAMP1-205ENST00000535927 CPXCR1Q8N123 301 aa18.66■□□□□ 0.58
VAMP1-205ENST00000535927 CUL5Q93034 780 aa18.66■□□□□ 0.58
VAMP1-205ENST00000535927 PHF20Q9BVI0 1012 aa18.66■□□□□ 0.58
VAMP1-205ENST00000535927 PSTPIP2Q9H939 334 aa18.66■□□□□ 0.58
VAMP1-205ENST00000535927 RAVER2Q9HCJ3 691 aaKnown RBP18.66■□□□□ 0.58
VAMP1-205ENST00000535927 RIC8AQ9NPQ8 531 aa18.66■□□□□ 0.58
VAMP1-205ENST00000535927 SMCO2A6NFE2 343 aa18.65■□□□□ 0.58
VAMP1-205ENST00000535927 BCRP11274 1271 aa18.65■□□□□ 0.58
VAMP1-205ENST00000535927 MAPK4P31152 587 aa18.65■□□□□ 0.58
VAMP1-205ENST00000535927 NLRP5P59047 1200 aa18.65■□□□□ 0.58
VAMP1-205ENST00000535927 SAMD1Q6SPF0 538 aaPredicted RBP18.65■□□□□ 0.58
VAMP1-205ENST00000535927 ABRAQ8N0Z2 381 aa18.65■□□□□ 0.58
VAMP1-205ENST00000535927 TRERF1Q96PN7 1200 aa18.65■□□□□ 0.58
VAMP1-205ENST00000535927 ACAD9Q9H845 621 aa18.65■□□□□ 0.58
VAMP1-205ENST00000535927 BTBD7Q9P203 1132 aa18.65■□□□□ 0.58
VAMP1-205ENST00000535927 PCDHA4Q9UN74 947 aa18.65■□□□□ 0.58
VAMP1-205ENST00000535927 CASP8AP2Q9UKL3 1982 aa18.64■□□□□ 0.58
VAMP1-205ENST00000535927 STX6O43752 255 aa18.64■□□□□ 0.57
VAMP1-205ENST00000535927 PPP1R11O60927 126 aaPredicted RBP18.64■□□□□ 0.57
VAMP1-205ENST00000535927 CNMDO75829 334 aa18.64■□□□□ 0.57
VAMP1-205ENST00000535927 MMP1P03956 469 aa18.64■□□□□ 0.57
VAMP1-205ENST00000535927 ALAS1P13196 640 aa18.64■□□□□ 0.57
VAMP1-205ENST00000535927 SYT1P21579 422 aa18.64■□□□□ 0.57
VAMP1-205ENST00000535927 ADCY7P51828 1080 aa18.64■□□□□ 0.57
VAMP1-205ENST00000535927 PLS1Q14651 629 aa18.64■□□□□ 0.57
VAMP1-205ENST00000535927 KRT40Q6A162 431 aa18.64■□□□□ 0.57
VAMP1-205ENST00000535927 CCAR1Q8IX12 1150 aaKnown RBP18.64■□□□□ 0.57
VAMP1-205ENST00000535927 PIBF1Q8WXW3 757 aa18.64■□□□□ 0.57
VAMP1-205ENST00000535927 COA7Q96BR5 231 aa18.64■□□□□ 0.57
VAMP1-205ENST00000535927 AGBL1Q96MI9 1066 aa18.64■□□□□ 0.57
VAMP1-205ENST00000535927 ZIC5Q96T25 663 aa18.64■□□□□ 0.57
VAMP1-205ENST00000535927 FOXP1Q9H334 677 aaPredicted RBP18.64■□□□□ 0.57
VAMP1-205ENST00000535927 PFASO15067 1338 aa18.64■□□□□ 0.57
VAMP1-205ENST00000535927 LOC102724159A0A0B4J2E5 919 aa18.63■□□□□ 0.57
VAMP1-205ENST00000535927 hCG_1642624A0A1W2PR95 340 aa18.63■□□□□ 0.57
VAMP1-205ENST00000535927 CRHR2Q13324 411 aa18.63■□□□□ 0.57
VAMP1-205ENST00000535927 AP3B2Q13367 1082 aa18.63■□□□□ 0.57
VAMP1-205ENST00000535927 ARHGEF6Q15052 776 aa18.63■□□□□ 0.57
VAMP1-205ENST00000535927 PWP2Q15269 919 aaKnown RBP18.63■□□□□ 0.57
VAMP1-205ENST00000535927 ANKRD13CQ8N6S4 541 aa18.63■□□□□ 0.57
VAMP1-205ENST00000535927 PAGR1Q9BTK6 254 aa18.63■□□□□ 0.57
VAMP1-205ENST00000535927 MOV10L1Q9BXT6 1211 aaKnown RBP18.63■□□□□ 0.57
VAMP1-205ENST00000535927 ZSCAN16Q9H4T2 348 aaPredicted RBP18.63■□□□□ 0.57
VAMP1-205ENST00000535927 RNF146Q9NTX7 359 aa18.63■□□□□ 0.57
VAMP1-205ENST00000535927 VPS54Q9P1Q0 977 aa18.63■□□□□ 0.57
VAMP1-205ENST00000535927 PDE4DIPQ5VU43 2346 aa18.63■□□□□ 0.57
VAMP1-205ENST00000535927 GCOM1H8Y6P7 765 aaPredicted RBP18.62■□□□□ 0.57
VAMP1-205ENST00000535927 POLR2MP0CAP2 368 aa18.62■□□□□ 0.57
VAMP1-205ENST00000535927 DDIT3P35638 169 aa18.62■□□□□ 0.57
VAMP1-205ENST00000535927 KRT2P35908 639 aa18.62■□□□□ 0.57
VAMP1-205ENST00000535927 RGS19P49795 217 aa18.62■□□□□ 0.57
VAMP1-205ENST00000535927 USH1GQ495M9 461 aa18.62■□□□□ 0.57
VAMP1-205ENST00000535927 POTEEQ6S8J3 1075 aa18.62■□□□□ 0.57
VAMP1-205ENST00000535927 BLIDQ8IZY5 108 aa18.62■□□□□ 0.57
VAMP1-205ENST00000535927 GPKOWQ92917 476 aaPredicted RBP eCLIP18.62■□□□□ 0.57
VAMP1-205ENST00000535927 EHMT1Q9H9B1 1298 aa18.62■□□□□ 0.57
VAMP1-205ENST00000535927 TXNRD2Q9NNW7 524 aa18.62■□□□□ 0.57
VAMP1-205ENST00000535927 RNF186Q9NXI6 227 aa18.62■□□□□ 0.57
VAMP1-205ENST00000535927 ATP6V1DQ9Y5K8 247 aa18.62■□□□□ 0.57
VAMP1-205ENST00000535927 SMCHD1A6NHR9 2005 aa18.62■□□□□ 0.57
VAMP1-205ENST00000535927 B4DLN1 442 aa18.61■□□□□ 0.57
VAMP1-205ENST00000535927 U2AF2P26368 475 aaKnown RBP eCLIP18.61■□□□□ 0.57
VAMP1-205ENST00000535927 HSD17B4P51659 736 aa18.61■□□□□ 0.57
VAMP1-205ENST00000535927 SNAP25P60880 206 aa18.61■□□□□ 0.57
VAMP1-205ENST00000535927 Q3C1V9 767 aa18.61■□□□□ 0.57
VAMP1-205ENST00000535927 BRAPQ7Z569 592 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms