RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 CEP290O15078 2479 aa12.47□□□□□ -0.41
UBE3B-205ENST00000535900 TRIOBPQ9H2D6 2365 aa12.47□□□□□ -0.41
UBE3B-205ENST00000535900 F5H6K3 240 aa12.47□□□□□ -0.41
UBE3B-205ENST00000535900 PLA2G6O60733 806 aa12.47□□□□□ -0.41
UBE3B-205ENST00000535900 CDC27P30260 824 aa12.47□□□□□ -0.41
UBE3B-205ENST00000535900 ADD1P35611 737 aaKnown RBP12.47□□□□□ -0.41
UBE3B-205ENST00000535900 SLC1A4P43007 532 aa12.47□□□□□ -0.41
UBE3B-205ENST00000535900 AKAP17AQ02040 695 aaKnown RBP12.47□□□□□ -0.41
UBE3B-205ENST00000535900 KLRC3Q07444 240 aa12.47□□□□□ -0.41
UBE3B-205ENST00000535900 CACNB2Q08289 660 aaPredicted RBP12.47□□□□□ -0.41
UBE3B-205ENST00000535900 SSRP1Q08945 709 aaKnown RBP12.47□□□□□ -0.41
UBE3B-205ENST00000535900 ZNF543Q08ER8 600 aa12.47□□□□□ -0.41
UBE3B-205ENST00000535900 ST3GAL1Q11201 340 aa12.47□□□□□ -0.41
UBE3B-205ENST00000535900 NTRK3Q16288 839 aa12.47□□□□□ -0.41
UBE3B-205ENST00000535900 SLFN13Q68D06 897 aa12.47□□□□□ -0.41
UBE3B-205ENST00000535900 LBX2Q6XYB7 198 aa12.47□□□□□ -0.41
UBE3B-205ENST00000535900 FAM184AQ8NB25 1140 aa12.47□□□□□ -0.41
UBE3B-205ENST00000535900 USP6NLQ92738 828 aa12.47□□□□□ -0.41
UBE3B-205ENST00000535900 MYL10Q9BUA6 226 aa12.47□□□□□ -0.41
UBE3B-205ENST00000535900 VCPKMTQ9H867 229 aa12.47□□□□□ -0.41
UBE3B-205ENST00000535900 NCOA5Q9HCD5 579 aaKnown RBP12.47□□□□□ -0.41
UBE3B-205ENST00000535900 MAD2L2Q9UI95 211 aa12.47□□□□□ -0.41
UBE3B-205ENST00000535900 A0A1W2PPC1 479 aa12.46□□□□□ -0.41
UBE3B-205ENST00000535900 PTPDC1A2A3K4 754 aa12.46□□□□□ -0.41
UBE3B-205ENST00000535900 SLC15A5A6NIM6 579 aa12.46□□□□□ -0.41
UBE3B-205ENST00000535900 KLRF2D3W0D1 207 aa12.46□□□□□ -0.41
UBE3B-205ENST00000535900 PRPF3O43395 683 aaKnown RBP12.46□□□□□ -0.41
UBE3B-205ENST00000535900 DEXIO95424 95 aa12.46□□□□□ -0.41
UBE3B-205ENST00000535900 CTDNEP1O95476 244 aa12.46□□□□□ -0.41
UBE3B-205ENST00000535900 GJB2P29033 226 aa12.46□□□□□ -0.41
UBE3B-205ENST00000535900 CCND3P30281 292 aaPredicted RBP12.46□□□□□ -0.41
UBE3B-205ENST00000535900 MFSD14CQ5VZR4 134 aa12.46□□□□□ -0.41
UBE3B-205ENST00000535900 POTEEQ6S8J3 1075 aa12.46□□□□□ -0.41
UBE3B-205ENST00000535900 LRRC47Q8N1G4 583 aaKnown RBP12.46□□□□□ -0.41
UBE3B-205ENST00000535900 PRO3102Q9H379 93 aa12.46□□□□□ -0.41
UBE3B-205ENST00000535900 BTBD7Q9P203 1132 aa12.46□□□□□ -0.41
UBE3B-205ENST00000535900 PFASO15067 1338 aa12.45□□□□□ -0.42
UBE3B-205ENST00000535900 A0A1W2PRG0 241 aa12.45□□□□□ -0.42
UBE3B-205ENST00000535900 hCG_1984214I3L0E3 225 aa12.45□□□□□ -0.42
UBE3B-205ENST00000535900 WDR46O15213 610 aaKnown RBP12.45□□□□□ -0.42
UBE3B-205ENST00000535900 NDUFB10O96000 172 aa12.45□□□□□ -0.42
UBE3B-205ENST00000535900 BMP3P12645 472 aa12.45□□□□□ -0.42
UBE3B-205ENST00000535900 SYN1P17600 705 aa12.45□□□□□ -0.42
UBE3B-205ENST00000535900 XBP1P17861 261 aa12.45□□□□□ -0.42
UBE3B-205ENST00000535900 RXRAP19793 462 aa12.45□□□□□ -0.42
UBE3B-205ENST00000535900 PTPREP23469 700 aa12.45□□□□□ -0.42
UBE3B-205ENST00000535900 FUT2Q10981 343 aa12.45□□□□□ -0.42
UBE3B-205ENST00000535900 TRAF1Q13077 416 aa12.45□□□□□ -0.42
UBE3B-205ENST00000535900 GRB14Q14449 540 aa12.45□□□□□ -0.42
UBE3B-205ENST00000535900 SAMD1Q6SPF0 538 aaPredicted RBP12.45□□□□□ -0.42
UBE3B-205ENST00000535900 BTNL9Q6UXG8 535 aa12.45□□□□□ -0.42
UBE3B-205ENST00000535900 CLEC10AQ8IUN9 316 aa12.45□□□□□ -0.42
UBE3B-205ENST00000535900 CCDC144CPQ8IYA2 1237 aa12.45□□□□□ -0.42
UBE3B-205ENST00000535900 ZNF713Q8N859 430 aaPredicted RBP12.45□□□□□ -0.42
UBE3B-205ENST00000535900 CHURC1Q8WUH1 139 aa12.45□□□□□ -0.42
UBE3B-205ENST00000535900 ORC3Q9UBD5 711 aaPredicted RBP12.45□□□□□ -0.42
UBE3B-205ENST00000535900 PARP14Q460N5 1801 aa12.45□□□□□ -0.42
UBE3B-205ENST00000535900 FLOT1O75955 427 aa12.44□□□□□ -0.42
UBE3B-205ENST00000535900 FDX1P10109 184 aa12.44□□□□□ -0.42
UBE3B-205ENST00000535900 CNGA1P29973 690 aa12.44□□□□□ -0.42
UBE3B-205ENST00000535900 MNX1P50219 401 aaPredicted RBP12.44□□□□□ -0.42
UBE3B-205ENST00000535900 PLS1Q14651 629 aa12.44□□□□□ -0.42
UBE3B-205ENST00000535900 CCDC96Q2M329 555 aa12.44□□□□□ -0.42
UBE3B-205ENST00000535900 LARP1BQ659C4 914 aaKnown RBP12.44□□□□□ -0.42
UBE3B-205ENST00000535900 CLEC17AQ6ZS10 378 aa12.44□□□□□ -0.42
UBE3B-205ENST00000535900 FAM160B2Q86V87 743 aa12.44□□□□□ -0.42
UBE3B-205ENST00000535900 TEX2Q8IWB9 1127 aa12.44□□□□□ -0.42
UBE3B-205ENST00000535900 RIOX1Q9H6W3 641 aa12.44□□□□□ -0.42
UBE3B-205ENST00000535900 FLRT1Q9NZU1 646 aa12.44□□□□□ -0.42
UBE3B-205ENST00000535900 FEM1BQ9UK73 627 aa12.44□□□□□ -0.42
UBE3B-205ENST00000535900 PNMA2Q9UL42 364 aa12.44□□□□□ -0.42
UBE3B-205ENST00000535900 CNTNAP5Q8WYK1 1306 aa12.43□□□□□ -0.42
UBE3B-205ENST00000535900 RLFQ13129 1914 aa12.43□□□□□ -0.42
UBE3B-205ENST00000535900 JAK2O60674 1132 aa12.43□□□□□ -0.42
UBE3B-205ENST00000535900 COG2Q14746 738 aa12.43□□□□□ -0.42
UBE3B-205ENST00000535900 DPP9Q86TI2 863 aa12.43□□□□□ -0.42
UBE3B-205ENST00000535900 RAB11FIP4Q86YS3 637 aa12.43□□□□□ -0.42
UBE3B-205ENST00000535900 SPICE1Q8N0Z3 855 aa12.43□□□□□ -0.42
UBE3B-205ENST00000535900 SRBD1Q8N5C6 995 aaKnown RBP12.43□□□□□ -0.42
UBE3B-205ENST00000535900 MB21D1Q8N884 522 aa12.43□□□□□ -0.42
UBE3B-205ENST00000535900 SPRYD3Q8NCJ5 442 aa12.43□□□□□ -0.42
UBE3B-205ENST00000535900 RRP36Q96EU6 259 aaKnown RBP12.43□□□□□ -0.42
UBE3B-205ENST00000535900 SLC26A6Q9BXS9 759 aa12.43□□□□□ -0.42
UBE3B-205ENST00000535900 MOV10L1Q9BXT6 1211 aaKnown RBP12.43□□□□□ -0.42
UBE3B-205ENST00000535900 SPATC1LQ9H0A9 340 aa12.43□□□□□ -0.42
UBE3B-205ENST00000535900 SH3GLB2Q9NR46 395 aa12.43□□□□□ -0.42
UBE3B-205ENST00000535900 HOXC10Q9NYD6 342 aa12.43□□□□□ -0.42
UBE3B-205ENST00000535900 SEC63Q9UGP8 760 aaKnown RBP12.43□□□□□ -0.42
UBE3B-205ENST00000535900 DDX20Q9UHI6 824 aaKnown RBP12.43□□□□□ -0.42
UBE3B-205ENST00000535900 COL11A1P12107 1806 aaPredicted RBP12.43□□□□□ -0.42
UBE3B-205ENST00000535900 BAZ2BQ9UIF8 2168 aaKnown RBP12.42□□□□□ -0.42
UBE3B-205ENST00000535900 STX6O43752 255 aa12.42□□□□□ -0.42
UBE3B-205ENST00000535900 RAD21O60216 631 aa12.42□□□□□ -0.42
UBE3B-205ENST00000535900 MSCO60682 206 aa12.42□□□□□ -0.42
UBE3B-205ENST00000535900 PLEKHA8P1O95397 391 aa12.42□□□□□ -0.42
UBE3B-205ENST00000535900 HOXC6P09630 235 aa12.42□□□□□ -0.42
UBE3B-205ENST00000535900 FDPSP14324 419 aaKnown RBP12.42□□□□□ -0.42
UBE3B-205ENST00000535900 ERCC3P19447 782 aa12.42□□□□□ -0.42
UBE3B-205ENST00000535900 SYT1P21579 422 aa12.42□□□□□ -0.42
UBE3B-205ENST00000535900 ADORA2AP29274 412 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms