RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 ASTN1O14525 1302 aa24.34■■□□□ 1.49
LTBR-205ENST00000535739 ASB14A6NK59 587 aa24.33■■□□□ 1.49
LTBR-205ENST00000535739 BEX3Q00994 111 aa24.33■■□□□ 1.49
LTBR-205ENST00000535739 TNFAIP2Q03169 654 aa24.33■■□□□ 1.49
LTBR-205ENST00000535739 TTBK2Q6IQ55 1244 aa24.33■■□□□ 1.49
LTBR-205ENST00000535739 NOL8Q76FK4 1167 aaKnown RBP24.33■■□□□ 1.49
LTBR-205ENST00000535739 CDX2Q99626 313 aaPredicted RBP24.33■■□□□ 1.49
LTBR-205ENST00000535739 CYP39A1Q9NYL5 469 aa24.33■■□□□ 1.49
LTBR-205ENST00000535739 TBX21Q9UL17 535 aa24.33■■□□□ 1.49
LTBR-205ENST00000535739 CCPG1Q9ULG6 757 aa24.33■■□□□ 1.49
LTBR-205ENST00000535739 MROH7Q68CQ1 1323 aa24.33■■□□□ 1.48
LTBR-205ENST00000535739 A0A0U1RQG5 324 aaPredicted RBP24.32■■□□□ 1.48
LTBR-205ENST00000535739 TIMP1P01033 207 aa24.32■■□□□ 1.48
LTBR-205ENST00000535739 SLC16A2P36021 539 aa24.32■■□□□ 1.48
LTBR-205ENST00000535739 ZNF589Q86UQ0 364 aaPredicted RBP24.32■■□□□ 1.48
LTBR-205ENST00000535739 DCAF4Q8WV16 495 aa24.32■■□□□ 1.48
LTBR-205ENST00000535739 TTYH1Q9H313 450 aaPredicted RBP24.32■■□□□ 1.48
LTBR-205ENST00000535739 ARVCFO00192 962 aa24.31■■□□□ 1.48
LTBR-205ENST00000535739 HSPD1P10809 573 aaKnown RBP24.31■■□□□ 1.48
LTBR-205ENST00000535739 PTGS1P23219 599 aa24.31■■□□□ 1.48
LTBR-205ENST00000535739 NMIQ13287 307 aaPredicted RBP24.31■■□□□ 1.48
LTBR-205ENST00000535739 NSMFQ6X4W1 530 aa24.31■■□□□ 1.48
LTBR-205ENST00000535739 PURBQ96QR8 312 aaKnown RBP24.31■■□□□ 1.48
LTBR-205ENST00000535739 TMEM47Q9BQJ4 181 aa24.31■■□□□ 1.48
LTBR-205ENST00000535739 LNPKQ9C0E8 428 aa24.31■■□□□ 1.48
LTBR-205ENST00000535739 GNEQ9Y223 722 aaKnown RBP24.31■■□□□ 1.48
LTBR-205ENST00000535739 ICAM1P05362 532 aa24.3■■□□□ 1.48
LTBR-205ENST00000535739 HAND2P61296 217 aa24.3■■□□□ 1.48
LTBR-205ENST00000535739 NKX3-2P78367 333 aa24.3■■□□□ 1.48
LTBR-205ENST00000535739 EEPD1Q7L9B9 569 aa24.3■■□□□ 1.48
LTBR-205ENST00000535739 RANBP17Q9H2T7 1088 aaKnown RBP24.3■■□□□ 1.48
LTBR-205ENST00000535739 PDGFCQ9NRA1 345 aa24.3■■□□□ 1.48
LTBR-205ENST00000535739 FRMPD2Q68DX3 1309 aaPredicted RBP24.3■■□□□ 1.48
LTBR-205ENST00000535739 TRIM6-TRIM34B2RNG4 842 aa24.29■■□□□ 1.48
LTBR-205ENST00000535739 TOP1P11387 765 aaKnown RBP24.29■■□□□ 1.48
LTBR-205ENST00000535739 MFSD5Q6N075 450 aa24.29■■□□□ 1.48
LTBR-205ENST00000535739 BTNL9Q6UXG8 535 aa24.29■■□□□ 1.48
LTBR-205ENST00000535739 TLK2Q86UE8 772 aa24.29■■□□□ 1.48
LTBR-205ENST00000535739 FBXO16Q8IX29 292 aaPredicted RBP24.29■■□□□ 1.48
LTBR-205ENST00000535739 FAM126BQ8IXS8 530 aa24.29■■□□□ 1.48
LTBR-205ENST00000535739 GPCPD1Q9NPB8 672 aa24.29■■□□□ 1.48
LTBR-205ENST00000535739 MYO9BQ13459 2157 aa24.28■■□□□ 1.48
LTBR-205ENST00000535739 SMPD1P17405 629 aa24.28■■□□□ 1.48
LTBR-205ENST00000535739 SYDE2Q5VT97 1194 aa24.28■■□□□ 1.48
LTBR-205ENST00000535739 TAPT1Q6NXT6 567 aa24.28■■□□□ 1.48
LTBR-205ENST00000535739 CXCL17Q6UXB2 119 aa24.28■■□□□ 1.48
LTBR-205ENST00000535739 MYLIPQ8WY64 445 aa24.28■■□□□ 1.48
LTBR-205ENST00000535739 RILPL2Q969X0 211 aa24.28■■□□□ 1.48
LTBR-205ENST00000535739 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.28■■□□□ 1.483e-8■■■■■ 29.7
LTBR-205ENST00000535739 TCP11L1Q9NUJ3 509 aa24.28■■□□□ 1.48
LTBR-205ENST00000535739 DYNC1LI2O43237 492 aaPredicted RBP24.27■■□□□ 1.48
LTBR-205ENST00000535739 FSCN1Q16658 493 aaKnown RBP24.27■■□□□ 1.48
LTBR-205ENST00000535739 TMEM63BQ5T3F8 832 aa24.27■■□□□ 1.48
LTBR-205ENST00000535739 B4GALNT3Q6L9W6 998 aa24.27■■□□□ 1.48
LTBR-205ENST00000535739 TICAM2Q86XR7 235 aa24.27■■□□□ 1.48
LTBR-205ENST00000535739 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.27■■□□□ 1.48
LTBR-205ENST00000535739 PPP1R12CQ9BZL4 782 aa24.27■■□□□ 1.48
LTBR-205ENST00000535739 AP5M1Q9H0R1 490 aa24.27■■□□□ 1.48
LTBR-205ENST00000535739 ZMYM6O95789 1325 aa24.27■■□□□ 1.48
LTBR-205ENST00000535739 CCDC171Q6TFL3 1326 aa24.27■■□□□ 1.48
LTBR-205ENST00000535739 VCANP13611 3396 aa24.26■■□□□ 1.47
LTBR-205ENST00000535739 TLR3O15455 904 aaKnown RBP24.26■■□□□ 1.47
LTBR-205ENST00000535739 BAATQ14032 418 aaPredicted RBP24.26■■□□□ 1.47
LTBR-205ENST00000535739 IQSEC1Q6DN90 963 aa24.26■■□□□ 1.47
LTBR-205ENST00000535739 C16orf59Q7L2K0 433 aa24.26■■□□□ 1.47
LTBR-205ENST00000535739 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.25■■□□□ 1.47
LTBR-205ENST00000535739 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.25■■□□□ 1.47
LTBR-205ENST00000535739 NFIBO00712 420 aa24.25■■□□□ 1.47
LTBR-205ENST00000535739 CD4P01730 458 aa24.25■■□□□ 1.47
LTBR-205ENST00000535739 PDHBP11177 359 aa24.25■■□□□ 1.47
LTBR-205ENST00000535739 CSF2RAP15509 400 aa24.25■■□□□ 1.47
LTBR-205ENST00000535739 PPIGQ13427 754 aaKnown RBP eCLIP24.25■■□□□ 1.476e-13■□□□□ 10.7
LTBR-205ENST00000535739 AKNAD1Q5T1N1 836 aa24.25■■□□□ 1.47
LTBR-205ENST00000535739 MFSD6Q6ZSS7 791 aa24.25■■□□□ 1.47
LTBR-205ENST00000535739 TBC1D10CQ8IV04 446 aa24.25■■□□□ 1.47
LTBR-205ENST00000535739 MORC4Q8TE76 937 aa24.25■■□□□ 1.47
LTBR-205ENST00000535739 ITGA7Q13683 1181 aa24.24■■□□□ 1.47
LTBR-205ENST00000535739 TMEM240Q5SV17 173 aa24.24■■□□□ 1.47
LTBR-205ENST00000535739 KIAA1211Q6ZU35 1233 aa24.24■■□□□ 1.47
LTBR-205ENST00000535739 SMC5Q8IY18 1101 aa24.24■■□□□ 1.47
LTBR-205ENST00000535739 TMEM199Q8N511 208 aa24.24■■□□□ 1.47
LTBR-205ENST00000535739 SLC43A3Q8NBI5 491 aa24.24■■□□□ 1.47
LTBR-205ENST00000535739 MAFAQ8NHW3 353 aaPredicted RBP24.24■■□□□ 1.47
LTBR-205ENST00000535739 VTA1Q9NP79 307 aa24.24■■□□□ 1.47
LTBR-205ENST00000535739 PTPDC1A2A3K4 754 aa24.23■■□□□ 1.47
LTBR-205ENST00000535739 CABYRO75952 493 aa24.23■■□□□ 1.47
LTBR-205ENST00000535739 ACRP10323 421 aa24.23■■□□□ 1.47
LTBR-205ENST00000535739 SDSP20132 328 aa24.23■■□□□ 1.47
LTBR-205ENST00000535739 DNAJB2P25686 324 aa24.23■■□□□ 1.47
LTBR-205ENST00000535739 CYP2C18P33260 490 aa24.23■■□□□ 1.47
LTBR-205ENST00000535739 ALDH5A1P51649 535 aaPredicted RBP24.23■■□□□ 1.47
LTBR-205ENST00000535739 ADD3Q9UEY8 706 aaKnown RBP24.23■■□□□ 1.47
LTBR-205ENST00000535739 Q9Y3F1 56 aa24.23■■□□□ 1.47
LTBR-205ENST00000535739 GRIN2DO15399 1336 aa24.23■■□□□ 1.47
LTBR-205ENST00000535739 TMEM265A0A087WTH1 108 aa24.22■■□□□ 1.47
LTBR-205ENST00000535739 ZEB2O60315 1214 aa24.22■■□□□ 1.47
LTBR-205ENST00000535739 CENPBP07199 599 aaPredicted RBP24.22■■□□□ 1.47
LTBR-205ENST00000535739 ZNF543Q08ER8 600 aa24.22■■□□□ 1.47
LTBR-205ENST00000535739 CLEC4DQ8WXI8 215 aa24.22■■□□□ 1.47
LTBR-205ENST00000535739 TTC14Q96N46 770 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms