RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 B2RBV5 119 aa8.06□□□□□ -1.12
PRKDC-205ENST00000535375 ATP2B1P20020 1258 aa8.06□□□□□ -1.12
PRKDC-205ENST00000535375 TMEM132EQ6IEE7 984 aa8.06□□□□□ -1.12
PRKDC-205ENST00000535375 SYDE1Q6ZW31 735 aaPredicted RBP8.06□□□□□ -1.12
PRKDC-205ENST00000535375 EEPD1Q7L9B9 569 aa8.06□□□□□ -1.12
PRKDC-205ENST00000535375 TMEM52Q8NDY8 209 aa8.06□□□□□ -1.12
PRKDC-205ENST00000535375 HNRNPLLQ8WVV9 542 aaKnown RBP8.06□□□□□ -1.12
PRKDC-205ENST00000535375 C8orf37Q96NL8 207 aa8.06□□□□□ -1.12
PRKDC-205ENST00000535375 JMJD8Q96S16 334 aa8.06□□□□□ -1.12
PRKDC-205ENST00000535375 PPP1R16BQ96T49 567 aa8.06□□□□□ -1.12
PRKDC-205ENST00000535375 TRIM55Q9BYV6 548 aa8.06□□□□□ -1.12
PRKDC-205ENST00000535375 EMC9Q9Y3B6 208 aa8.06□□□□□ -1.12
PRKDC-205ENST00000535375 OR14I1A6ND48 311 aa8.05□□□□□ -1.12
PRKDC-205ENST00000535375 SUSD5O60279 629 aa8.05□□□□□ -1.12
PRKDC-205ENST00000535375 GJB6O95452 261 aa8.05□□□□□ -1.12
PRKDC-205ENST00000535375 MESP2Q0VG99 397 aa8.05□□□□□ -1.12
PRKDC-205ENST00000535375 ZNF605Q86T29 641 aa8.05□□□□□ -1.12
PRKDC-205ENST00000535375 MICAL1Q8TDZ2 1067 aa8.05□□□□□ -1.12
PRKDC-205ENST00000535375 SLC26A8Q96RN1 970 aa8.05□□□□□ -1.12
PRKDC-205ENST00000535375 IMPACTQ9P2X3 320 aa8.05□□□□□ -1.12
PRKDC-205ENST00000535375 AGRPO00253 132 aa8.04□□□□□ -1.12
PRKDC-205ENST00000535375 TMEM253P0C7T8 217 aa8.04□□□□□ -1.12
PRKDC-205ENST00000535375 CKAP2LQ8IYA6 745 aa8.04□□□□□ -1.12
PRKDC-205ENST00000535375 ZNF513Q8N8E2 541 aaPredicted RBP8.04□□□□□ -1.12
PRKDC-205ENST00000535375 MCMBPQ9BTE3 642 aa8.04□□□□□ -1.12
PRKDC-205ENST00000535375 U2SURPO15042 1029 aaKnown RBP8.03□□□□□ -1.12
PRKDC-205ENST00000535375 EFEMP2O95967 443 aa8.03□□□□□ -1.12
PRKDC-205ENST00000535375 MPOP05164 745 aa8.03□□□□□ -1.12
PRKDC-205ENST00000535375 PAMP19021 973 aa8.03□□□□□ -1.12
PRKDC-205ENST00000535375 L1CAMP32004 1257 aa8.03□□□□□ -1.12
PRKDC-205ENST00000535375 KIR3DS1Q14943 382 aa8.03□□□□□ -1.12
PRKDC-205ENST00000535375 OLFML2BQ68BL8 750 aa8.03□□□□□ -1.12
PRKDC-205ENST00000535375 TRIM59Q8IWR1 403 aa8.03□□□□□ -1.12
PRKDC-205ENST00000535375 KCNN1Q92952 543 aa8.03□□□□□ -1.12
PRKDC-205ENST00000535375 ZNF552Q9H707 407 aaPredicted RBP8.03□□□□□ -1.12
PRKDC-205ENST00000535375 KCNK12Q9HB15 430 aa8.03□□□□□ -1.12
PRKDC-205ENST00000535375 ACSL6Q9UKU0 697 aa8.03□□□□□ -1.12
PRKDC-205ENST00000535375 TRBV23OR9-2A0A075B6M9 112 aa8.02□□□□□ -1.13
PRKDC-205ENST00000535375 NPHP3-ACAD11A0A0J9YXS1 232 aa8.02□□□□□ -1.13
PRKDC-205ENST00000535375 NFIBO00712 420 aa8.02□□□□□ -1.13
PRKDC-205ENST00000535375 FZD5Q13467 585 aa8.02□□□□□ -1.13
PRKDC-205ENST00000535375 DDR2Q16832 855 aa8.02□□□□□ -1.13
PRKDC-205ENST00000535375 GTF2IRD2BQ6EKJ0 949 aa8.02□□□□□ -1.13
PRKDC-205ENST00000535375 GTF2IRD2Q86UP8 949 aa8.02□□□□□ -1.13
PRKDC-205ENST00000535375 BHLHE22Q8NFJ8 381 aaPredicted RBP8.02□□□□□ -1.13
PRKDC-205ENST00000535375 KRTAP9-9Q9BYP9 154 aa8.02□□□□□ -1.13
PRKDC-205ENST00000535375 KRTAP9-4Q9BYQ2 154 aa8.02□□□□□ -1.13
PRKDC-205ENST00000535375 EPN3Q9H201 632 aa8.02□□□□□ -1.13
PRKDC-205ENST00000535375 ARID1BQ8NFD5 2236 aaPredicted RBP8.01□□□□□ -1.13
PRKDC-205ENST00000535375 ABLIM1O14639 778 aa8.01□□□□□ -1.13
PRKDC-205ENST00000535375 KLF4O43474 513 aa8.01□□□□□ -1.13
PRKDC-205ENST00000535375 PEX10O60683 326 aa8.01□□□□□ -1.13
PRKDC-205ENST00000535375 ITGAVP06756 1048 aa8.01□□□□□ -1.13
PRKDC-205ENST00000535375 SDHBP21912 280 aa8.01□□□□□ -1.13
PRKDC-205ENST00000535375 RAP1GAPP47736 663 aa8.01□□□□□ -1.13
PRKDC-205ENST00000535375 CEBPAP49715 358 aaPredicted RBP8.01□□□□□ -1.13
PRKDC-205ENST00000535375 TMEM62Q0P6H9 643 aa8.01□□□□□ -1.13
PRKDC-205ENST00000535375 SCRN1Q12765 414 aa8.01□□□□□ -1.13
PRKDC-205ENST00000535375 ZNF124Q15973 351 aa8.01□□□□□ -1.13
PRKDC-205ENST00000535375 CELF2-AS1Q8N7Q2 184 aa8.01□□□□□ -1.13
PRKDC-205ENST00000535375 MRGPRX3Q96LB0 322 aa8.01□□□□□ -1.13
PRKDC-205ENST00000535375 LGR4Q9BXB1 951 aa8.01□□□□□ -1.13
PRKDC-205ENST00000535375 CYP26B1Q9NR63 512 aa8.01□□□□□ -1.13
PRKDC-205ENST00000535375 GTF2F1P35269 517 aaKnown RBP eCLIP8□□□□□ -1.13
PRKDC-205ENST00000535375 CORO7P57737 925 aa8□□□□□ -1.13
PRKDC-205ENST00000535375 ERVFRD-1P60508 538 aa8□□□□□ -1.13
PRKDC-205ENST00000535375 RBM10P98175 930 aaKnown RBP8□□□□□ -1.13
PRKDC-205ENST00000535375 MVKQ03426 396 aa8□□□□□ -1.13
PRKDC-205ENST00000535375 RAB33AQ14088 237 aa8□□□□□ -1.13
PRKDC-205ENST00000535375 BICRALQ6AI39 1079 aa8□□□□□ -1.13
PRKDC-205ENST00000535375 MRM1Q6IN84 353 aaKnown RBP8□□□□□ -1.13
PRKDC-205ENST00000535375 ZNF227Q86WZ6 799 aa8□□□□□ -1.13
PRKDC-205ENST00000535375 CPNE8Q86YQ8 564 aa8□□□□□ -1.13
PRKDC-205ENST00000535375 PDLIM7Q9NR12 457 aa8□□□□□ -1.13
PRKDC-205ENST00000535375 SIRT5Q9NXA8 310 aa8□□□□□ -1.13
PRKDC-205ENST00000535375 NUDT19A8MXV4 375 aa7.99□□□□□ -1.13
PRKDC-205ENST00000535375 PLS3P13797 630 aa7.99□□□□□ -1.13
PRKDC-205ENST00000535375 HOXC12P31275 282 aa7.99□□□□□ -1.13
PRKDC-205ENST00000535375 KCNJ6P48051 423 aa7.99□□□□□ -1.13
PRKDC-205ENST00000535375 SRSF3P84103 164 aaKnown RBP7.99□□□□□ -1.13
PRKDC-205ENST00000535375 RAB3GAP1Q15042 981 aa7.99□□□□□ -1.13
PRKDC-205ENST00000535375 BTN2A2Q8WVV5 523 aa7.99□□□□□ -1.13
PRKDC-205ENST00000535375 NKX2-4Q9H2Z4 354 aa7.99□□□□□ -1.13
PRKDC-205ENST00000535375 GPRC5CQ9NQ84 441 aa7.99□□□□□ -1.13
PRKDC-205ENST00000535375 CLEC1BQ9P126 229 aa7.99□□□□□ -1.13
PRKDC-205ENST00000535375 SNRPB2P08579 225 aaKnown RBP7.98□□□□□ -1.13
PRKDC-205ENST00000535375 ECI1P42126 302 aa7.98□□□□□ -1.13
PRKDC-205ENST00000535375 JAG1P78504 1218 aa7.98□□□□□ -1.13
PRKDC-205ENST00000535375 CABP7Q86V35 215 aa7.98□□□□□ -1.13
PRKDC-205ENST00000535375 ANKLE2Q86XL3 938 aa7.98□□□□□ -1.13
PRKDC-205ENST00000535375 NLGN2Q8NFZ4 835 aa7.98□□□□□ -1.13
PRKDC-205ENST00000535375 USP33Q8TEY7 942 aa7.98□□□□□ -1.13
PRKDC-205ENST00000535375 COPS5Q92905 334 aa7.98□□□□□ -1.13
PRKDC-205ENST00000535375 CCDC140Q96MF4 163 aa7.98□□□□□ -1.13
PRKDC-205ENST00000535375 HIRIP3Q9BW71 556 aaPredicted RBP7.98□□□□□ -1.13
PRKDC-205ENST00000535375 MCOLN1Q9GZU1 580 aa7.98□□□□□ -1.13
PRKDC-205ENST00000535375 TEX51A0A1B0GUA7 166 aa7.97□□□□□ -1.13
PRKDC-205ENST00000535375 TCAF2A6NFQ2 919 aa7.97□□□□□ -1.13
PRKDC-205ENST00000535375 HRKO00198 91 aa7.97□□□□□ -1.13
PRKDC-205ENST00000535375 NPHS1O60500 1241 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms