RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 CAMTA1Q9Y6Y1 1673 aa7.32□□□□□ -1.24
TNFRSF1A-206ENST00000535038 SOS1Q07889 1333 aaPredicted RBP7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 PITPNM2Q9BZ72 1349 aa7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 PXDNLA1KZ92 1463 aa7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 LMTK3Q96Q04 1460 aa7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 KDM3BQ7LBC6 1761 aa7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 GSPT1P15170 499 aaKnown RBP7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 RASIP1Q5U651 963 aa7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 ALG1LQ6GMV1 187 aa7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 CEP85Q6P2H3 762 aa7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 ARMCX6Q7L4S7 300 aa7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 ZSCAN29Q8IWY8 852 aaPredicted RBP7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 RPAP2Q8IXW5 612 aaPredicted RBP7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 ANKRD24Q8TF21 1146 aa7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 FOXQ1Q9C009 403 aa7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 CHMP5Q9NZZ3 219 aa7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 CYP8B1Q9UNU6 501 aa7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 MAPK8IP1Q9UQF2 711 aa7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 LMO7Q8WWI1 1683 aa7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 MSH6P52701 1360 aa7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 LTN1O94822 1766 aa7.31□□□□□ -1.24
TNFRSF1A-206ENST00000535038 FSD2A1L4K1 749 aa7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 LRRC10BA6NIK2 292 aa7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 ELL2O00472 640 aaPredicted RBP7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 GIPC1O14908 333 aa7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 LRIG2O94898 1065 aa7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 MCM4P33991 863 aa7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 CEBPAP49715 358 aaPredicted RBP7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 MFAP1P55081 439 aaKnown RBP7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 FMR1Q06787 632 aaKnown RBP eCLIP7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 KCNMB1Q16558 191 aa7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 MTHFSDQ2M296 383 aaKnown RBP7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 KRT24Q2M2I5 525 aa7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 ANKRD45Q5TZF3 282 aa7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 PCNX4Q63HM2 1172 aa7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 ZNF507Q8TCN5 953 aa7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 SLC26A8Q96RN1 970 aa7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 SETDB2Q96T68 719 aa7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 BABAM1Q9NWV8 329 aa7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 FAM53CQ9NYF3 392 aa7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 EID1Q9Y6B2 187 aa7.3□□□□□ -1.24
TNFRSF1A-206ENST00000535038 SALL3Q9BXA9 1300 aa7.29□□□□□ -1.24
TNFRSF1A-206ENST00000535038 ADAMTS7Q9UKP4 1686 aa7.29□□□□□ -1.24
TNFRSF1A-206ENST00000535038 PRAMEF27A3QJZ7 478 aa7.29□□□□□ -1.24
TNFRSF1A-206ENST00000535038 CELA3AP09093 270 aa7.29□□□□□ -1.24
TNFRSF1A-206ENST00000535038 ATP2B2Q01814 1243 aa7.29□□□□□ -1.24
TNFRSF1A-206ENST00000535038 TTC22Q5TAA0 569 aa7.29□□□□□ -1.24
TNFRSF1A-206ENST00000535038 CLEC17AQ6ZS10 378 aa7.29□□□□□ -1.24
TNFRSF1A-206ENST00000535038 MCM10Q7L590 875 aa7.29□□□□□ -1.24
TNFRSF1A-206ENST00000535038 IL17RAQ96F46 866 aa7.29□□□□□ -1.24
TNFRSF1A-206ENST00000535038 FAM84AQ96KN4 292 aa7.29□□□□□ -1.24
TNFRSF1A-206ENST00000535038 KRTAP4-7Q9BYR0 210 aa7.29□□□□□ -1.24
TNFRSF1A-206ENST00000535038 SLKQ9H2G2 1235 aaPredicted RBP7.29□□□□□ -1.24
TNFRSF1A-206ENST00000535038 SPG7Q9UQ90 795 aa7.29□□□□□ -1.24
TNFRSF1A-206ENST00000535038 CTNND2Q9UQB3 1225 aa7.29□□□□□ -1.24
TNFRSF1A-206ENST00000535038 SLIT3O75094 1523 aa7.28□□□□□ -1.24
TNFRSF1A-206ENST00000535038 CDC45O75419 566 aa7.28□□□□□ -1.24
TNFRSF1A-206ENST00000535038 MESP2Q0VG99 397 aa7.28□□□□□ -1.24
TNFRSF1A-206ENST00000535038 INPP5AQ14642 412 aa7.28□□□□□ -1.24
TNFRSF1A-206ENST00000535038 G2E3Q7L622 706 aa7.28□□□□□ -1.24
TNFRSF1A-206ENST00000535038 THEMISQ8N1K5 641 aaPredicted RBP7.28□□□□□ -1.24
TNFRSF1A-206ENST00000535038 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.28□□□□□ -1.24
TNFRSF1A-206ENST00000535038 LMCD1Q9NZU5 365 aa7.28□□□□□ -1.24
TNFRSF1A-206ENST00000535038 CEMIPQ8WUJ3 1361 aa7.28□□□□□ -1.24
TNFRSF1A-206ENST00000535038 ADAMTSL3P82987 1691 aa7.28□□□□□ -1.24
TNFRSF1A-206ENST00000535038 MST1RQ04912 1400 aa7.27□□□□□ -1.24
TNFRSF1A-206ENST00000535038 TRPM3Q9HCF6 1732 aaPredicted RBP7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 CRYBG1Q9Y4K1 1723 aa7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 ZNF503-AS2A6NEH8 195 aa7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 FAM155AB1AL88 458 aaPredicted RBP7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 EIF5BO60841 1220 aaKnown RBP7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 SLITRK5O94991 958 aa7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 HOXC9P31274 260 aa7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 AFMP43652 599 aa7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 RAB3GAP1Q15042 981 aa7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 MLANAQ16655 118 aa7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 LRFN4Q6PJG9 635 aa7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 HDXQ7Z353 690 aa7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 PLPPR2Q96GM1 343 aa7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 ASB16Q96NS5 453 aa7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 MEIS3Q99687 375 aa7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 C12orf49Q9H741 205 aa7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 FAM8A1Q9UBU6 413 aa7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 WWC3Q9ULE0 1092 aa7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 TPX2Q9ULW0 747 aaKnown RBP7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 SIPA1L3O60292 1781 aaPredicted RBP7.27□□□□□ -1.25
TNFRSF1A-206ENST00000535038 RGPD2P0DJD1 1756 aa7.26□□□□□ -1.25
TNFRSF1A-206ENST00000535038 MAP3K5Q99683 1374 aa7.26□□□□□ -1.25
TNFRSF1A-206ENST00000535038 USP17L7P0C7H9 530 aa7.26□□□□□ -1.25
TNFRSF1A-206ENST00000535038 KCNA6P17658 529 aa7.26□□□□□ -1.25
TNFRSF1A-206ENST00000535038 CCT4P50991 539 aaKnown RBP7.26□□□□□ -1.25
TNFRSF1A-206ENST00000535038 SFRP5Q5T4F7 317 aa7.26□□□□□ -1.25
TNFRSF1A-206ENST00000535038 HSCBQ8IWL3 235 aa7.26□□□□□ -1.25
TNFRSF1A-206ENST00000535038 MFSD4AQ8N468 514 aa7.26□□□□□ -1.25
TNFRSF1A-206ENST00000535038 HSPA12BQ96MM6 686 aa7.26□□□□□ -1.25
TNFRSF1A-206ENST00000535038 MIPEPQ99797 713 aa7.26□□□□□ -1.25
TNFRSF1A-206ENST00000535038 CARS2Q9HA77 564 aaKnown RBP7.26□□□□□ -1.25
TNFRSF1A-206ENST00000535038 FBRSQ9HAH7 460 aa7.26□□□□□ -1.25
TNFRSF1A-206ENST00000535038 OVOS2A0A0G2JMS6 1433 aa7.26□□□□□ -1.25
TNFRSF1A-206ENST00000535038 ADGRL3Q9HAR2 1447 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms