RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 CNNM3Q8NE01 707 aa27.03■■□□□ 1.92
PTPMT1-205ENST00000534775 CCDC34Q96HJ3 373 aa27.03■■□□□ 1.92
PTPMT1-205ENST00000534775 L3MBTL3Q96JM7 780 aaPredicted RBP27.03■■□□□ 1.92
PTPMT1-205ENST00000534775 PYM1Q9BRP8 204 aaKnown RBP27.03■■□□□ 1.92
PTPMT1-205ENST00000534775 WDR18Q9BV38 432 aa27.03■■□□□ 1.92
PTPMT1-205ENST00000534775 PANK2Q9BZ23 570 aa27.03■■□□□ 1.92
PTPMT1-205ENST00000534775 RANBP17Q9H2T7 1088 aaKnown RBP27.03■■□□□ 1.92
PTPMT1-205ENST00000534775 STX1AQ16623 288 aa27.02■■□□□ 1.92
PTPMT1-205ENST00000534775 UBE2SQ16763 222 aa27.02■■□□□ 1.92
PTPMT1-205ENST00000534775 PRAMEF18Q5VWM3 479 aa27.02■■□□□ 1.92
PTPMT1-205ENST00000534775 DTHD1Q6ZMT9 781 aa27.02■■□□□ 1.92
PTPMT1-205ENST00000534775 NAP1L4Q99733 375 aaKnown RBP27.02■■□□□ 1.92
PTPMT1-205ENST00000534775 KIAA1468Q9P260 1216 aa27.02■■□□□ 1.92
PTPMT1-205ENST00000534775 POLR2AP24928 1970 aaKnown RBP27.02■■□□□ 1.92
PTPMT1-205ENST00000534775 NEMFO60524 1076 aa27.01■■□□□ 1.92
PTPMT1-205ENST00000534775 SNAP25P60880 206 aa27.01■■□□□ 1.92
PTPMT1-205ENST00000534775 AP3B2Q13367 1082 aa27.01■■□□□ 1.92
PTPMT1-205ENST00000534775 ZRSR1Q15695 479 aaKnown RBP27.01■■□□□ 1.92
PTPMT1-205ENST00000534775 KANK3Q6NY19 840 aa27.01■■□□□ 1.92
PTPMT1-205ENST00000534775 SYMPKQ92797 1274 aaKnown RBP27.01■■□□□ 1.92
PTPMT1-205ENST00000534775 KIFC2Q96AC6 838 aa27.01■■□□□ 1.92
PTPMT1-205ENST00000534775 POLR2DO15514 142 aaKnown RBP27.01■■□□□ 1.91
PTPMT1-205ENST00000534775 GRIN3BO60391 1043 aa27.01■■□□□ 1.91
PTPMT1-205ENST00000534775 USH1GQ495M9 461 aa27.01■■□□□ 1.91
PTPMT1-205ENST00000534775 LONRF3Q496Y0 759 aa27.01■■□□□ 1.91
PTPMT1-205ENST00000534775 SULF1Q8IWU6 871 aa27.01■■□□□ 1.91
PTPMT1-205ENST00000534775 FAM200AQ8TCP9 573 aa27.01■■□□□ 1.91
PTPMT1-205ENST00000534775 KLRG1Q96E93 195 aa27.01■■□□□ 1.91
PTPMT1-205ENST00000534775 USP25Q9UHP3 1055 aa27.01■■□□□ 1.91
PTPMT1-205ENST00000534775 SSC5DA1L4H1 1573 aa27■■□□□ 1.91
PTPMT1-205ENST00000534775 OR52Z1P0C646 297 aa27■■□□□ 1.91
PTPMT1-205ENST00000534775 ANO6Q4KMQ2 910 aa27■■□□□ 1.91
PTPMT1-205ENST00000534775 ANO10Q9NW15 660 aa27■■□□□ 1.91
PTPMT1-205ENST00000534775 TXLNAP40222 546 aa26.99■■□□□ 1.91
PTPMT1-205ENST00000534775 NOL9Q5SY16 702 aaKnown RBP26.99■■□□□ 1.91
PTPMT1-205ENST00000534775 USP50Q70EL3 339 aaPredicted RBP26.99■■□□□ 1.91
PTPMT1-205ENST00000534775 EPSTI1Q96J88 318 aa26.99■■□□□ 1.91
PTPMT1-205ENST00000534775 TMEM60Q9H2L4 133 aa26.99■■□□□ 1.91
PTPMT1-205ENST00000534775 PTPRAP18433 802 aa26.98■■□□□ 1.91
PTPMT1-205ENST00000534775 IL17AQ16552 155 aa26.98■■□□□ 1.91
PTPMT1-205ENST00000534775 USP49Q70CQ1 688 aa26.98■■□□□ 1.91
PTPMT1-205ENST00000534775 ZKSCAN4Q969J2 545 aaPredicted RBP26.98■■□□□ 1.91
PTPMT1-205ENST00000534775 FOSP01100 380 aaPredicted RBP26.98■■□□□ 1.91
PTPMT1-205ENST00000534775 GCFC2P16383 781 aaKnown RBP26.98■■□□□ 1.91
PTPMT1-205ENST00000534775 MTMR2Q13614 643 aa26.98■■□□□ 1.91
PTPMT1-205ENST00000534775 PPP4R3AQ6IN85 833 aa26.98■■□□□ 1.91
PTPMT1-205ENST00000534775 PRPF38AQ8NAV1 312 aaKnown RBP26.98■■□□□ 1.91
PTPMT1-205ENST00000534775 ZNF280CQ8ND82 737 aa26.98■■□□□ 1.91
PTPMT1-205ENST00000534775 USP17L15C9J2P7 530 aa26.97■■□□□ 1.91
PTPMT1-205ENST00000534775 USP17L13C9JLJ4 530 aa26.97■■□□□ 1.91
PTPMT1-205ENST00000534775 USP17L11C9JVI0 530 aa26.97■■□□□ 1.91
PTPMT1-205ENST00000534775 USP17L18D6R9N7 530 aa26.97■■□□□ 1.91
PTPMT1-205ENST00000534775 USP17L22D6RA61 530 aa26.97■■□□□ 1.91
PTPMT1-205ENST00000534775 USP17L17D6RBQ6 530 aa26.97■■□□□ 1.91
PTPMT1-205ENST00000534775 USP17L19D6RCP7 530 aa26.97■■□□□ 1.91
PTPMT1-205ENST00000534775 USP17L20D6RJB6 530 aa26.97■■□□□ 1.91
PTPMT1-205ENST00000534775 USP17L24Q0WX57 530 aa26.97■■□□□ 1.91
PTPMT1-205ENST00000534775 USP17L6PQ6QN14 398 aa26.97■■□□□ 1.91
PTPMT1-205ENST00000534775 SLF1Q9BQI6 1058 aa26.97■■□□□ 1.91
PTPMT1-205ENST00000534775 SERTAD1Q9UHV2 236 aa26.97■■□□□ 1.91
PTPMT1-205ENST00000534775 MYH7BA7E2Y1 1941 aa26.96■■□□□ 1.91
PTPMT1-205ENST00000534775 MEIS2O14770 477 aa26.96■■□□□ 1.91
PTPMT1-205ENST00000534775 BACE1P56817 501 aa26.96■■□□□ 1.91
PTPMT1-205ENST00000534775 SPP2Q13103 211 aa26.96■■□□□ 1.91
PTPMT1-205ENST00000534775 CCDC174Q6PII3 467 aa26.96■■□□□ 1.91
PTPMT1-205ENST00000534775 PDILTQ8N807 584 aa26.96■■□□□ 1.91
PTPMT1-205ENST00000534775 ZC3H15Q8WU90 426 aaKnown RBP26.96■■□□□ 1.91
PTPMT1-205ENST00000534775 AK8Q96MA6 479 aa26.96■■□□□ 1.91
PTPMT1-205ENST00000534775 ANO3Q9BYT9 981 aa26.96■■□□□ 1.91
PTPMT1-205ENST00000534775 MRPL11Q9Y3B7 192 aaKnown RBP26.96■■□□□ 1.91
PTPMT1-205ENST00000534775 PHIPQ8WWQ0 1821 aa26.96■■□□□ 1.91
PTPMT1-205ENST00000534775 ABCB11O95342 1321 aa26.95■■□□□ 1.91
PTPMT1-205ENST00000534775 PIK3CDO00329 1044 aa26.95■■□□□ 1.91
PTPMT1-205ENST00000534775 ACTN4O43707 911 aaKnown RBP26.95■■□□□ 1.91
PTPMT1-205ENST00000534775 CEP57L1Q8IYX8 460 aa26.95■■□□□ 1.91
PTPMT1-205ENST00000534775 FBXO28Q9NVF7 368 aa26.95■■□□□ 1.91
PTPMT1-205ENST00000534775 SCN4AP35499 1836 aa26.95■■□□□ 1.9
PTPMT1-205ENST00000534775 GLTPD2A6NH11 291 aa26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 SPDYE3A6NKU9 549 aa26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 C19orf81C9J6K1 198 aa26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 EPHX2P34913 555 aa26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 USP11P51784 963 aa26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 CCDC173Q0VFZ6 552 aa26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 CALCRLQ16602 461 aa26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 DHX58Q96C10 678 aa26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 DNAJC25Q9H1X3 360 aa26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 EMILIN3Q9NT22 766 aa26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 TUBE1Q9UJT0 475 aa26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 SLFN14P0C7P3 912 aa26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 VCAM1P19320 739 aa26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 ZNF165P49910 485 aa26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 IQUBQ8NA54 791 aa26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 ERCC4Q92889 916 aaPredicted RBP26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 TANGO6Q9C0B7 1094 aa26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 NAT10Q9H0A0 1025 aaKnown RBP26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 PNMA2Q9UL42 364 aa26.94■■□□□ 1.9
PTPMT1-205ENST00000534775 PPP1R12BO60237 982 aaPredicted RBP26.93■■□□□ 1.9
PTPMT1-205ENST00000534775 USP2O75604 605 aaPredicted RBP26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms