RNA–Protein interactions for RNA: ENST00000534557.1

VPS51-215, Transcript of VPS51, GARP complex subunit, humanhuman

APPRIS ALT2 TSL 3

Gene VPS51, Length 854 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-215ENST00000534557 LENG1Q96BZ8 264 aaPredicted RBP21.54■■□□□ 1.04
VPS51-215ENST00000534557 AP5M1Q9H0R1 490 aa21.54■■□□□ 1.04
VPS51-215ENST00000534557 RANBP17Q9H2T7 1088 aaKnown RBP21.54■■□□□ 1.04
VPS51-215ENST00000534557 SLC16A2P36021 539 aa21.53■■□□□ 1.04
VPS51-215ENST00000534557 IMMTQ16891 758 aaKnown RBP21.53■■□□□ 1.04
VPS51-215ENST00000534557 GPATCH4Q5T3I0 446 aaKnown RBP21.53■■□□□ 1.04
VPS51-215ENST00000534557 ANKRD33Q7Z3H0 272 aa21.53■■□□□ 1.04
VPS51-215ENST00000534557 CYP39A1Q9NYL5 469 aa21.53■■□□□ 1.04
VPS51-215ENST00000534557 FRMPD2Q68DX3 1309 aaPredicted RBP21.53■■□□□ 1.04
VPS51-215ENST00000534557 TRIM43BA6NCK2 446 aa21.52■■□□□ 1.04
VPS51-215ENST00000534557 B4DLN1 442 aa21.52■■□□□ 1.04
VPS51-215ENST00000534557 ASGR1P07306 291 aa21.52■■□□□ 1.04
VPS51-215ENST00000534557 MRPL12P52815 198 aaKnown RBP21.52■■□□□ 1.04
VPS51-215ENST00000534557 IQSEC1Q6DN90 963 aa21.52■■□□□ 1.04
VPS51-215ENST00000534557 TTBK2Q6IQ55 1244 aa21.52■■□□□ 1.04
VPS51-215ENST00000534557 DGKHQ86XP1 1220 aa21.52■■□□□ 1.04
VPS51-215ENST00000534557 TRIM43Q96BQ3 446 aaPredicted RBP21.52■■□□□ 1.04
VPS51-215ENST00000534557 UPF3AQ9H1J1 476 aaKnown RBP21.52■■□□□ 1.04
VPS51-215ENST00000534557 LOC102724159A0A0B4J2E5 919 aa21.51■■□□□ 1.03
VPS51-215ENST00000534557 A0A0U1RQG5 324 aaPredicted RBP21.51■■□□□ 1.03
VPS51-215ENST00000534557 SOWAHBA6NEL2 793 aa21.51■■□□□ 1.03
VPS51-215ENST00000534557 KIAA0355O15063 1070 aa21.51■■□□□ 1.03
VPS51-215ENST00000534557 TLR3O15455 904 aaKnown RBP21.51■■□□□ 1.03
VPS51-215ENST00000534557 CABYRO75952 493 aa21.51■■□□□ 1.03
VPS51-215ENST00000534557 PDHBP11177 359 aa21.51■■□□□ 1.03
VPS51-215ENST00000534557 PWP2Q15269 919 aaKnown RBP21.51■■□□□ 1.03
VPS51-215ENST00000534557 MUM1L1Q5H9M0 696 aa21.51■■□□□ 1.03
VPS51-215ENST00000534557 SH3RF1Q7Z6J0 888 aa21.51■■□□□ 1.03
VPS51-215ENST00000534557 SLC17A8Q8NDX2 589 aa21.51■■□□□ 1.03
VPS51-215ENST00000534557 FGD4Q96M96 766 aa21.51■■□□□ 1.03
VPS51-215ENST00000534557 DSCC1Q9BVC3 393 aa21.51■■□□□ 1.03
VPS51-215ENST00000534557 PTPDC1A2A3K4 754 aa21.5■■□□□ 1.03
VPS51-215ENST00000534557 SHHQ15465 462 aa21.5■■□□□ 1.03
VPS51-215ENST00000534557 FAM109BQ6ICB4 259 aaPredicted RBP21.5■■□□□ 1.03
VPS51-215ENST00000534557 CCSAPQ6IQ19 270 aaPredicted RBP21.5■■□□□ 1.03
VPS51-215ENST00000534557 SEZ6LQ9BYH1 1024 aa21.5■■□□□ 1.03
VPS51-215ENST00000534557 KRT23Q9C075 422 aa21.5■■□□□ 1.03
VPS51-215ENST00000534557 KAT14Q9H8E8 782 aa21.5■■□□□ 1.03
VPS51-215ENST00000534557 VTA1Q9NP79 307 aa21.5■■□□□ 1.03
VPS51-215ENST00000534557 SUPT16HQ9Y5B9 1047 aaKnown RBP21.5■■□□□ 1.03
VPS51-215ENST00000534557 SZT2Q5T011 3432 aa21.49■■□□□ 1.03
VPS51-215ENST00000534557 DNAH12Q6ZR08 3092 aa21.49■■□□□ 1.03
VPS51-215ENST00000534557 FPGSQ05932 587 aa21.49■■□□□ 1.03
VPS51-215ENST00000534557 ZNF543Q08ER8 600 aa21.49■■□□□ 1.03
VPS51-215ENST00000534557 BAATQ14032 418 aaPredicted RBP21.49■■□□□ 1.03
VPS51-215ENST00000534557 Q7L0L9 218 aa21.49■■□□□ 1.03
VPS51-215ENST00000534557 CNNM2Q9H8M5 875 aa21.49■■□□□ 1.03
VPS51-215ENST00000534557 Q9Y3F1 56 aa21.49■■□□□ 1.03
VPS51-215ENST00000534557 ARVCFO00192 962 aa21.48■■□□□ 1.03
VPS51-215ENST00000534557 DYNC1LI2O43237 492 aaPredicted RBP21.48■■□□□ 1.03
VPS51-215ENST00000534557 KDM4AO75164 1064 aa21.48■■□□□ 1.03
VPS51-215ENST00000534557 FAAP100Q0VG06 881 aa21.48■■□□□ 1.03
VPS51-215ENST00000534557 KIAA1211Q6ZU35 1233 aa21.48■■□□□ 1.03
VPS51-215ENST00000534557 EEPD1Q7L9B9 569 aa21.48■■□□□ 1.03
VPS51-215ENST00000534557 TLK2Q86UE8 772 aa21.48■■□□□ 1.03
VPS51-215ENST00000534557 TBC1D10CQ8IV04 446 aa21.48■■□□□ 1.03
VPS51-215ENST00000534557 RUFY2Q8WXA3 655 aa21.48■■□□□ 1.03
VPS51-215ENST00000534557 ZKSCAN3Q9BRR0 538 aa21.48■■□□□ 1.03
VPS51-215ENST00000534557 KATNBL1Q9H079 304 aa21.48■■□□□ 1.03
VPS51-215ENST00000534557 MTMR10Q9NXD2 777 aa21.48■■□□□ 1.03
VPS51-215ENST00000534557 STXBP5LQ9Y2K9 1186 aa21.48■■□□□ 1.03
VPS51-215ENST00000534557 MYADML2A6NDP7 307 aa21.47■■□□□ 1.03
VPS51-215ENST00000534557 TIMP1P01033 207 aa21.47■■□□□ 1.03
VPS51-215ENST00000534557 NKX3-2P78367 333 aa21.47■■□□□ 1.03
VPS51-215ENST00000534557 FSCN1Q16658 493 aaKnown RBP21.47■■□□□ 1.03
VPS51-215ENST00000534557 ZNF697Q5TEC3 545 aa21.47■■□□□ 1.03
VPS51-215ENST00000534557 RNF207Q6ZRF8 634 aa21.47■■□□□ 1.03
VPS51-215ENST00000534557 RASGRP2Q7LDG7 609 aa21.47■■□□□ 1.03
VPS51-215ENST00000534557 SNHG28P0DPA3 235 aa21.46■■□□□ 1.03
VPS51-215ENST00000534557 CALML3P27482 149 aa21.46■■□□□ 1.03
VPS51-215ENST00000534557 BRDTQ58F21 947 aaPredicted RBP21.46■■□□□ 1.03
VPS51-215ENST00000534557 PNMA1Q8ND90 353 aa21.46■■□□□ 1.03
VPS51-215ENST00000534557 ZSCAN10Q96SZ4 725 aaPredicted RBP21.46■■□□□ 1.03
VPS51-215ENST00000534557 UBAC1Q9BSL1 405 aa21.46■■□□□ 1.03
VPS51-215ENST00000534557 MAF1Q9H063 256 aa21.46■■□□□ 1.03
VPS51-215ENST00000534557 GNEQ9Y223 722 aaKnown RBP21.46■■□□□ 1.03
VPS51-215ENST00000534557 WDR19Q8NEZ3 1342 aa21.46■■□□□ 1.03
VPS51-215ENST00000534557 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.45■■□□□ 1.02
VPS51-215ENST00000534557 ADCY6O43306 1168 aa21.45■■□□□ 1.02
VPS51-215ENST00000534557 CDK7P50613 346 aa21.45■■□□□ 1.02
VPS51-215ENST00000534557 SMAD3P84022 425 aaKnown RBP21.45■■□□□ 1.02
VPS51-215ENST00000534557 BEX3Q00994 111 aa21.45■■□□□ 1.02
VPS51-215ENST00000534557 PDE4DQ08499 809 aa21.45■■□□□ 1.02
VPS51-215ENST00000534557 TRDNQ13061 729 aa21.45■■□□□ 1.02
VPS51-215ENST00000534557 FBXO16Q8IX29 292 aaPredicted RBP21.45■■□□□ 1.02
VPS51-215ENST00000534557 TMEM199Q8N511 208 aa21.45■■□□□ 1.02
VPS51-215ENST00000534557 MORC4Q8TE76 937 aa21.45■■□□□ 1.02
VPS51-215ENST00000534557 RNPC3Q96LT9 517 aaKnown RBP21.45■■□□□ 1.02
VPS51-215ENST00000534557 NEDD4P46934 1319 aa21.45■■□□□ 1.02
VPS51-215ENST00000534557 B4E1Z4 1266 aa21.44■■□□□ 1.02
VPS51-215ENST00000534557 NFIBO00712 420 aa21.44■■□□□ 1.02
VPS51-215ENST00000534557 DHX16O60231 1041 aaKnown RBP21.44■■□□□ 1.02
VPS51-215ENST00000534557 SMPD1P17405 629 aa21.44■■□□□ 1.02
VPS51-215ENST00000534557 ALDH5A1P51649 535 aaPredicted RBP21.44■■□□□ 1.02
VPS51-215ENST00000534557 PPIGQ13427 754 aaKnown RBP eCLIP21.44■■□□□ 1.02
VPS51-215ENST00000534557 ASPRV1Q53RT3 343 aa21.44■■□□□ 1.02
VPS51-215ENST00000534557 C9orf50Q5SZB4 431 aa21.44■■□□□ 1.02
VPS51-215ENST00000534557 TAPT1Q6NXT6 567 aa21.44■■□□□ 1.02
VPS51-215ENST00000534557 DNERQ8NFT8 737 aa21.44■■□□□ 1.02
VPS51-215ENST00000534557 ANKS1AQ92625 1134 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms