RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 RTEL1Q9NZ71 1219 aa11.53□□□□□ -0.56
RPS3-219ENST00000534440 FEM1BQ9UK73 627 aa11.53□□□□□ -0.56
RPS3-219ENST00000534440 CSADQ9Y600 493 aa11.53□□□□□ -0.56
RPS3-219ENST00000534440 SMCHD1A6NHR9 2005 aa11.53□□□□□ -0.56
RPS3-219ENST00000534440 BRCA2P51587 3418 aa11.53□□□□□ -0.56
RPS3-219ENST00000534440 SMCO2A6NFE2 343 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 OPLAHO14841 1288 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 USP14P54578 494 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 SOX10P56693 466 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 PTPAQ15257 358 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 SH3D19Q5HYK7 790 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 ANO1Q5XXA6 986 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 PIK3AP1Q6ZUJ8 805 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 FAM160B2Q86V87 743 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 ANKRD13AQ8IZ07 590 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 FAM177A1Q8N128 213 aaPredicted RBP11.52□□□□□ -0.57
RPS3-219ENST00000534440 LINC00301Q8NCQ3 95 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 OTUD5Q96G74 571 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 WNK4Q96J92 1243 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 PGBD1Q96JS3 809 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 SPATA32Q96LK8 384 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 ZNF396Q96N95 335 aaPredicted RBP11.52□□□□□ -0.57
RPS3-219ENST00000534440 TANGO6Q9C0B7 1094 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 BRMS1Q9HCU9 246 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 POLR3EQ9NVU0 708 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 TMEM260Q9NX78 707 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 RCOR1Q9UKL0 485 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 PCDHA6Q9UN73 950 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 PCDHA8Q9Y5H6 950 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 ZNF536O15090 1300 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 ELP1O95163 1332 aa11.52□□□□□ -0.57
RPS3-219ENST00000534440 COL11A1P12107 1806 aaPredicted RBP11.51□□□□□ -0.57
RPS3-219ENST00000534440 C19orf81C9J6K1 198 aa11.51□□□□□ -0.57
RPS3-219ENST00000534440 IRF6O14896 467 aa11.51□□□□□ -0.57
RPS3-219ENST00000534440 TRAK2O60296 914 aa11.51□□□□□ -0.57
RPS3-219ENST00000534440 TM4SF4P48230 202 aa11.51□□□□□ -0.57
RPS3-219ENST00000534440 CLK2P49760 499 aaKnown RBP11.51□□□□□ -0.57
RPS3-219ENST00000534440 ADCY7P51828 1080 aa11.51□□□□□ -0.57
RPS3-219ENST00000534440 SF3A1Q15459 793 aaKnown RBP11.51□□□□□ -0.57
RPS3-219ENST00000534440 UBE2SQ16763 222 aa11.51□□□□□ -0.57
RPS3-219ENST00000534440 USH1GQ495M9 461 aa11.51□□□□□ -0.57
RPS3-219ENST00000534440 ATL3Q6DD88 541 aa11.51□□□□□ -0.57
RPS3-219ENST00000534440 GALNT17Q6IS24 598 aa11.51□□□□□ -0.57
RPS3-219ENST00000534440 CCDC174Q6PII3 467 aa11.51□□□□□ -0.57
RPS3-219ENST00000534440 ARMC9Q7Z3E5 817 aa11.51□□□□□ -0.57
RPS3-219ENST00000534440 FBXO11Q86XK2 927 aa11.51□□□□□ -0.57
RPS3-219ENST00000534440 ERO1BQ86YB8 467 aa11.51□□□□□ -0.57
RPS3-219ENST00000534440 CCDC12Q8WUD4 166 aaPredicted RBP11.51□□□□□ -0.57
RPS3-219ENST00000534440 CHURC1Q8WUH1 139 aa11.51□□□□□ -0.57
RPS3-219ENST00000534440 P2RX7Q99572 595 aaKnown RBP11.51□□□□□ -0.57
RPS3-219ENST00000534440 SLF1Q9BQI6 1058 aa11.51□□□□□ -0.57
RPS3-219ENST00000534440 SCAND2PQ9GZW5 306 aaPredicted RBP11.51□□□□□ -0.57
RPS3-219ENST00000534440 PCDH10Q9P2E7 1040 aa11.51□□□□□ -0.57
RPS3-219ENST00000534440 PPP1R9AQ9ULJ8 1098 aa11.51□□□□□ -0.57
RPS3-219ENST00000534440 PCDHB6Q9Y5E3 794 aa11.51□□□□□ -0.57
RPS3-219ENST00000534440 PCDHA1Q9Y5I3 950 aa11.51□□□□□ -0.57
RPS3-219ENST00000534440 RBBP6Q7Z6E9 1792 aaKnown RBP11.51□□□□□ -0.57
RPS3-219ENST00000534440 A0A0G2JLL6 359 aaPredicted RBP11.5□□□□□ -0.57
RPS3-219ENST00000534440 FLOT1O75955 427 aa11.5□□□□□ -0.57
RPS3-219ENST00000534440 YEATS4O95619 227 aa11.5□□□□□ -0.57
RPS3-219ENST00000534440 PPATQ06203 517 aa11.5□□□□□ -0.57
RPS3-219ENST00000534440 MOGSQ13724 837 aa11.5□□□□□ -0.57
RPS3-219ENST00000534440 TPRNQ4KMQ1 711 aa11.5□□□□□ -0.57
RPS3-219ENST00000534440 TREML2Q5T2D2 321 aa11.5□□□□□ -0.57
RPS3-219ENST00000534440 PRRT2Q7Z6L0 340 aaPredicted RBP11.5□□□□□ -0.57
RPS3-219ENST00000534440 REXO1Q8N1G1 1221 aaKnown RBP11.5□□□□□ -0.57
RPS3-219ENST00000534440 REPS2Q8NFH8 660 aa11.5□□□□□ -0.57
RPS3-219ENST00000534440 ZNF296Q8WUU4 475 aaPredicted RBP11.5□□□□□ -0.57
RPS3-219ENST00000534440 OPTNQ96CV9 577 aa11.5□□□□□ -0.57
RPS3-219ENST00000534440 ATG4CQ96DT6 458 aa11.5□□□□□ -0.57
RPS3-219ENST00000534440 AMNQ9BXJ7 453 aa11.5□□□□□ -0.57
RPS3-219ENST00000534440 C6orf50Q9HD87 102 aa11.5□□□□□ -0.57
RPS3-219ENST00000534440 RIC8AQ9NPQ8 531 aa11.5□□□□□ -0.57
RPS3-219ENST00000534440 BIN2Q9UBW5 565 aaPredicted RBP11.5□□□□□ -0.57
RPS3-219ENST00000534440 CFAP45Q9UL16 551 aa11.5□□□□□ -0.57
RPS3-219ENST00000534440 KCNH4Q9UQ05 1017 aa11.5□□□□□ -0.57
RPS3-219ENST00000534440 MRVI1Q9Y6F6 885 aa11.5□□□□□ -0.57
RPS3-219ENST00000534440 CENPFP49454 3210 aa11.49□□□□□ -0.57
RPS3-219ENST00000534440 EDIL3O43854 480 aa11.49□□□□□ -0.57
RPS3-219ENST00000534440 ATP2B1P20020 1258 aa11.49□□□□□ -0.57
RPS3-219ENST00000534440 GNA11P29992 359 aa11.49□□□□□ -0.57
RPS3-219ENST00000534440 UBE2HP62256 183 aa11.49□□□□□ -0.57
RPS3-219ENST00000534440 PPIL2Q13356 520 aa11.49□□□□□ -0.57
RPS3-219ENST00000534440 INF2Q27J81 1249 aa11.49□□□□□ -0.57
RPS3-219ENST00000534440 RILPL1Q5EBL4 403 aa11.49□□□□□ -0.57
RPS3-219ENST00000534440 JAKMIP3Q5VZ66 844 aa11.49□□□□□ -0.57
RPS3-219ENST00000534440 POTEEQ6S8J3 1075 aa11.49□□□□□ -0.57
RPS3-219ENST00000534440 PRPF38AQ8NAV1 312 aaKnown RBP11.49□□□□□ -0.57
RPS3-219ENST00000534440 AGBL1Q96MI9 1066 aa11.49□□□□□ -0.57
RPS3-219ENST00000534440 CFHR5Q9BXR6 569 aa11.49□□□□□ -0.57
RPS3-219ENST00000534440 SLC38A10Q9HBR0 1119 aa11.49□□□□□ -0.57
RPS3-219ENST00000534440 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.49□□□□□ -0.57
RPS3-219ENST00000534440 TMOD4Q9NZQ9 345 aa11.49□□□□□ -0.57
RPS3-219ENST00000534440 USP17L15C9J2P7 530 aa11.48□□□□□ -0.57
RPS3-219ENST00000534440 USP17L13C9JLJ4 530 aa11.48□□□□□ -0.57
RPS3-219ENST00000534440 USP17L11C9JVI0 530 aa11.48□□□□□ -0.57
RPS3-219ENST00000534440 USP17L18D6R9N7 530 aa11.48□□□□□ -0.57
RPS3-219ENST00000534440 USP17L22D6RA61 530 aa11.48□□□□□ -0.57
RPS3-219ENST00000534440 USP17L17D6RBQ6 530 aa11.48□□□□□ -0.57
RPS3-219ENST00000534440 USP17L19D6RCP7 530 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms