RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 MAST2Q6P0Q8 1798 aa6.84□□□□□ -1.31
CHKA-208ENST00000533910 COL11A2P13942 1736 aaPredicted RBP6.84□□□□□ -1.31
CHKA-208ENST00000533910 LTBP1Q14766 1721 aa6.84□□□□□ -1.31
CHKA-208ENST00000533910 KIAA1551Q9HCM1 1747 aa6.84□□□□□ -1.31
CHKA-208ENST00000533910 FAM177BA6PVY3 158 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 NFKBIEO00221 500 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 C2CD2LO14523 706 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 KIF4AO95239 1232 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 PDE8BO95263 885 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 GYS1P13807 737 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 FGFR2P21802 821 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 FGFR3P22607 806 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 MAP2K3P46734 347 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 ST13P50502 369 aaKnown RBP6.83□□□□□ -1.32
CHKA-208ENST00000533910 ZNF157P51786 506 aaPredicted RBP6.83□□□□□ -1.32
CHKA-208ENST00000533910 ANAPC15P60006 121 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 TIMM10P62072 90 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 NFIXQ14938 502 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 RABEP1Q15276 862 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 PUM3Q15397 648 aaKnown RBP6.83□□□□□ -1.32
CHKA-208ENST00000533910 ATP2B3Q16720 1220 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 NBPF5PQ86XG9 351 aaPredicted RBP6.83□□□□□ -1.32
CHKA-208ENST00000533910 RUFY2Q8WXA3 655 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 ZNF512BQ96KM6 892 aaPredicted RBP6.83□□□□□ -1.32
CHKA-208ENST00000533910 CDC5LQ99459 802 aaKnown RBP6.83□□□□□ -1.32
CHKA-208ENST00000533910 FSD1Q9BTV5 496 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 LSG1Q9H089 658 aaKnown RBP6.83□□□□□ -1.32
CHKA-208ENST00000533910 RASSF4Q9H2L5 321 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 BOLA2Q9H3K6 86 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 SEC31BQ9NQW1 1179 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 CNNM1Q9NRU3 951 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 DIAPH3Q9NSV4 1193 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 DZANK1Q9NVP4 752 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 TLR6Q9Y2C9 796 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 LAMA4Q16363 1823 aa6.83□□□□□ -1.32
CHKA-208ENST00000533910 LOC100996750A0A140TA64 210 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 CELA3AP09093 270 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 ADORA1P30542 326 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 HSPA4P34932 840 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 IGHMBP2P38935 993 aaKnown RBP6.82□□□□□ -1.32
CHKA-208ENST00000533910 PCBP4P57723 403 aaKnown RBP6.82□□□□□ -1.32
CHKA-208ENST00000533910 PLAURQ03405 335 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 LAMC2Q13753 1193 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 ZNF827Q17R98 1081 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 CCNJLQ8IV13 435 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 KBTBD3Q8NAB2 608 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 SLC43A3Q8NBI5 491 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 ASAP3Q8TDY4 903 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 LPIN2Q92539 896 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 UBXN4Q92575 508 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 ACDQ96AP0 544 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 NEUROD6Q96NK8 337 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 MPHOSPH8Q99549 860 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 KRTAP4-6Q9BYQ5 205 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 PAG1Q9NWQ8 432 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 ADAMTS1Q9UHI8 967 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 DUOX1Q9NRD9 1551 aa6.82□□□□□ -1.32
CHKA-208ENST00000533910 CCDC171Q6TFL3 1326 aa6.81□□□□□ -1.32
CHKA-208ENST00000533910 A0A0D9SFI3 127 aa6.81□□□□□ -1.32
CHKA-208ENST00000533910 MAP3K6O95382 1288 aa6.81□□□□□ -1.32
CHKA-208ENST00000533910 APBA3O96018 575 aa6.81□□□□□ -1.32
CHKA-208ENST00000533910 IFIT1P09914 478 aaKnown RBP6.81□□□□□ -1.32
CHKA-208ENST00000533910 MCCP23508 829 aa6.81□□□□□ -1.32
CHKA-208ENST00000533910 TM4SF1P30408 202 aa6.81□□□□□ -1.32
CHKA-208ENST00000533910 GBP2P32456 591 aaPredicted RBP6.81□□□□□ -1.32
CHKA-208ENST00000533910 FAM160A1Q05DH4 1040 aa6.81□□□□□ -1.32
CHKA-208ENST00000533910 NMIQ13287 307 aaPredicted RBP6.81□□□□□ -1.32
CHKA-208ENST00000533910 CCDC158Q5M9N0 1113 aa6.81□□□□□ -1.32
CHKA-208ENST00000533910 PRR5LQ6MZQ0 368 aa6.81□□□□□ -1.32
CHKA-208ENST00000533910 PRPF40BQ6NWY9 871 aaKnown RBP6.81□□□□□ -1.32
CHKA-208ENST00000533910 CWC27Q6UX04 472 aaKnown RBP6.81□□□□□ -1.32
CHKA-208ENST00000533910 SYT9Q86SS6 491 aa6.81□□□□□ -1.32
CHKA-208ENST00000533910 CNBD1Q8NA66 436 aa6.81□□□□□ -1.32
CHKA-208ENST00000533910 KCNB2Q92953 911 aa6.81□□□□□ -1.32
CHKA-208ENST00000533910 EDC3Q96F86 508 aaKnown RBP6.81□□□□□ -1.32
CHKA-208ENST00000533910 FAM227BQ96M60 508 aa6.81□□□□□ -1.32
CHKA-208ENST00000533910 BSDC1Q9NW68 430 aaPredicted RBP6.81□□□□□ -1.32
CHKA-208ENST00000533910 PALD1Q9ULE6 856 aa6.81□□□□□ -1.32
CHKA-208ENST00000533910 ATXN7L1Q9ULK2 861 aaPredicted RBP6.81□□□□□ -1.32
CHKA-208ENST00000533910 ZNF804BA4D1E1 1349 aa6.8□□□□□ -1.32
CHKA-208ENST00000533910 CNTNAP5Q8WYK1 1306 aa6.8□□□□□ -1.32
CHKA-208ENST00000533910 DLEC1Q9Y238 1755 aa6.8□□□□□ -1.32
CHKA-208ENST00000533910 POLRMTO00411 1230 aaKnown RBP6.8□□□□□ -1.32
CHKA-208ENST00000533910 PAGE1O75459 146 aa6.8□□□□□ -1.32
CHKA-208ENST00000533910 UQCRFS1P1P0C7P4 283 aa6.8□□□□□ -1.32
CHKA-208ENST00000533910 SLC5A1P13866 664 aa6.8□□□□□ -1.32
CHKA-208ENST00000533910 NCLP19338 710 aaKnown RBP6.8□□□□□ -1.32
CHKA-208ENST00000533910 ATP2B1P20020 1258 aa6.8□□□□□ -1.32
CHKA-208ENST00000533910 MCAMP43121 646 aa6.8□□□□□ -1.32
CHKA-208ENST00000533910 CHRNDQ07001 517 aa6.8□□□□□ -1.32
CHKA-208ENST00000533910 DDR1Q08345 913 aa6.8□□□□□ -1.32
CHKA-208ENST00000533910 FAAP100Q0VG06 881 aa6.8□□□□□ -1.32
CHKA-208ENST00000533910 CRY2Q49AN0 593 aa6.8□□□□□ -1.32
CHKA-208ENST00000533910 TTC39AQ5SRH9 613 aa6.8□□□□□ -1.32
CHKA-208ENST00000533910 DDX46Q7L014 1031 aaKnown RBP6.8□□□□□ -1.32
CHKA-208ENST00000533910 ANKRD18AQ8IVF6 992 aa6.8□□□□□ -1.32
CHKA-208ENST00000533910 HSCBQ8IWL3 235 aa6.8□□□□□ -1.32
CHKA-208ENST00000533910 FLAD1Q8NFF5 587 aa6.8□□□□□ -1.32
CHKA-208ENST00000533910 NXPE3Q969Y0 559 aa6.8□□□□□ -1.32
CHKA-208ENST00000533910 PKNOX2Q96KN3 472 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms