RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 TMEM59LQ9UK28 342 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 PLAGL2Q9UPG8 496 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 DUSP10Q9Y6W6 482 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 ATP8B3O60423 1300 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 LOC285556D6RIA3 1793 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 PARP14Q460N5 1801 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 NRDCO43847 1150 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 NOL4O94818 638 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 PPP4CP60510 307 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 PIP4K2BP78356 416 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 ANKRD40Q6AI12 368 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 TXNRD3Q86VQ6 643 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 CCDC170Q8IYT3 715 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 BLIDQ8IZY5 108 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 COG1Q8WTW3 980 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 STAMQ92783 540 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 CELF1Q92879 486 aaKnown RBP4.97□□□□□ -1.61
CTSC-208ENST00000533897 DHTKD1Q96HY7 919 aaPredicted RBP4.97□□□□□ -1.61
CTSC-208ENST00000533897 PNMA5Q96PV4 448 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 TRIM9Q9C026 710 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 CUEDC2Q9H467 287 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 MED4Q9NPJ6 270 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 ARPP21Q9UBL0 812 aaPredicted RBP4.97□□□□□ -1.61
CTSC-208ENST00000533897 PUF60Q9UHX1 559 aaKnown RBP4.97□□□□□ -1.61
CTSC-208ENST00000533897 FAN1Q9Y2M0 1017 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 ATXN2Q99700 1313 aaKnown RBP4.97□□□□□ -1.61
CTSC-208ENST00000533897 EP400Q96L91 3159 aa4.97□□□□□ -1.61
CTSC-208ENST00000533897 LOC102724428A0A0B4J2F2 783 aa4.96□□□□□ -1.61
CTSC-208ENST00000533897 USP17L12C9JPN9 530 aa4.96□□□□□ -1.61
CTSC-208ENST00000533897 USP17L21D6R901 530 aa4.96□□□□□ -1.61
CTSC-208ENST00000533897 KIF5CO60282 957 aa4.96□□□□□ -1.61
CTSC-208ENST00000533897 SNHG28P0DPA3 235 aa4.96□□□□□ -1.61
CTSC-208ENST00000533897 ECHS1P30084 290 aa4.96□□□□□ -1.61
CTSC-208ENST00000533897 MARSP56192 900 aaKnown RBP4.96□□□□□ -1.61
CTSC-208ENST00000533897 SIK1P57059 783 aa4.96□□□□□ -1.61
CTSC-208ENST00000533897 ORC2Q13416 577 aaPredicted RBP4.96□□□□□ -1.61
CTSC-208ENST00000533897 ZRSR1Q15695 479 aaKnown RBP4.96□□□□□ -1.61
CTSC-208ENST00000533897 GRIK5Q16478 980 aa4.96□□□□□ -1.61
CTSC-208ENST00000533897 GALNT17Q6IS24 598 aa4.96□□□□□ -1.61
CTSC-208ENST00000533897 PIK3AP1Q6ZUJ8 805 aa4.96□□□□□ -1.61
CTSC-208ENST00000533897 ARHGAP27Q6ZUM4 889 aa4.96□□□□□ -1.61
CTSC-208ENST00000533897 OR8K1Q8NGG5 319 aa4.96□□□□□ -1.61
CTSC-208ENST00000533897 SPZ1Q9BXG8 430 aa4.96□□□□□ -1.61
CTSC-208ENST00000533897 SH2D4AQ9H788 454 aa4.96□□□□□ -1.61
CTSC-208ENST00000533897 SPATA31A5Q5VU36 1347 aa4.96□□□□□ -1.61
CTSC-208ENST00000533897 SPATA31A7Q8IWB4 1347 aa4.96□□□□□ -1.61
CTSC-208ENST00000533897 SIP14410 1827 aa4.96□□□□□ -1.61
CTSC-208ENST00000533897 FER1L6Q2WGJ9 1857 aa4.96□□□□□ -1.61
CTSC-208ENST00000533897 ERICH4A6NGS2 130 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 KCNMA1Q12791 1236 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 STK4Q13043 487 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 TMEM119Q4V9L6 283 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 HYIQ5T013 277 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 BARGINQ6ZT62 677 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 CATIPQ7Z7H3 387 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 CCDC82Q8N4S0 544 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 C1orf131Q8NDD1 294 aaKnown RBP4.96□□□□□ -1.62
CTSC-208ENST00000533897 CRYGNQ8WXF5 182 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 CAVIN3Q969G5 261 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 SLF1Q9BQI6 1058 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 UBAC1Q9BSL1 405 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 VPS16Q9H269 839 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 RMND1Q9NWS8 449 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 ESYT2A0FGR8 921 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 POLR3GO15318 223 aaPredicted RBP4.96□□□□□ -1.62
CTSC-208ENST00000533897 KRT9P35527 623 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 ZBED6P86452 979 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 GRB10Q13322 594 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 NOC3LQ8WTT2 800 aaKnown RBP4.96□□□□□ -1.62
CTSC-208ENST00000533897 NHEJ1Q9H9Q4 299 aaPredicted RBP4.96□□□□□ -1.62
CTSC-208ENST00000533897 SNX12Q9UMY4 172 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 CAPN6Q9Y6Q1 641 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 FRMD3A2A2Y4 597 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 MYO1CO00159 1063 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 ZNF185O15231 689 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 TLR2O60603 784 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 SRGAP2O75044 1071 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 RASA1P20936 1047 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 PRDX5P30044 214 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 DNM2P50570 870 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 RRAGBQ5VZM2 374 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 HDAC7Q8WUI4 952 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 MTMR8Q96EF0 704 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 RPGRIP1Q96KN7 1286 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 AK8Q96MA6 479 aa4.96□□□□□ -1.62
CTSC-208ENST00000533897 RTFDC1Q9BY42 306 aaPredicted RBP4.96□□□□□ -1.62
CTSC-208ENST00000533897 TRIM66O15016 1216 aa4.95□□□□□ -1.62
CTSC-208ENST00000533897 PLEKP08567 350 aaPredicted RBP4.95□□□□□ -1.62
CTSC-208ENST00000533897 CCNE1P24864 410 aa4.95□□□□□ -1.62
CTSC-208ENST00000533897 FXR2P51116 673 aaKnown RBP eCLIP4.95□□□□□ -1.62
CTSC-208ENST00000533897 CORO7P57737 925 aa4.95□□□□□ -1.62
CTSC-208ENST00000533897 MCCD1P59942 119 aaPredicted RBP4.95□□□□□ -1.62
CTSC-208ENST00000533897 SKOR1P84550 965 aa4.95□□□□□ -1.62
CTSC-208ENST00000533897 ECM1Q16610 540 aa4.95□□□□□ -1.62
CTSC-208ENST00000533897 HAUS3Q68CZ6 603 aa4.95□□□□□ -1.62
CTSC-208ENST00000533897 PPFIBP1Q86W92 1011 aa4.95□□□□□ -1.62
CTSC-208ENST00000533897 MREGQ8N565 214 aa4.95□□□□□ -1.62
CTSC-208ENST00000533897 NUP133Q8WUM0 1156 aa4.95□□□□□ -1.62
CTSC-208ENST00000533897 RIOX1Q9H6W3 641 aa4.95□□□□□ -1.62
CTSC-208ENST00000533897 GDF3Q9NR23 364 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms