RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 IL9RQ01113 521 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 APBB1IPQ7Z5R6 666 aaPredicted RBP4.45□□□□□ -1.7
SOX6-217ENST00000533870 TEX9Q8N6V9 391 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 MICAL1Q8TDZ2 1067 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 TUBGCP2Q9BSJ2 902 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 PDP2Q9P2J9 529 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 BAIAP2L1Q9UHR4 511 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 CAPN11Q9UMQ6 739 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 SNX12Q9UMY4 172 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 IKBKGQ9Y6K9 419 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 MADDQ8WXG6 1647 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 ADGRB1O14514 1584 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 OVOS2A0A0J9YW53 1432 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 OVOS2Q6IE36 1432 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 GMNCA6NCL1 334 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 CPA1P15085 419 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 ATF3P18847 181 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 KRT15P19012 456 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 LMNB1P20700 586 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 SMARCA1P28370 1054 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 HNRNPH3P31942 346 aaKnown RBP4.45□□□□□ -1.7
SOX6-217ENST00000533870 PDE4DQ08499 809 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 RAPGEF1Q13905 1077 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 DHX34Q14147 1143 aaKnown RBP4.45□□□□□ -1.7
SOX6-217ENST00000533870 SESTD1Q86VW0 696 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 FAM210AQ96ND0 272 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 PAGR1Q9BTK6 254 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 ATP6V0A4Q9HBG4 840 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 PRDM11Q9NQV5 511 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 KDM5AP29375 1690 aaKnown RBP4.45□□□□□ -1.7
SOX6-217ENST00000533870 CPDO75976 1380 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 NOP2P46087 812 aaKnown RBP4.45□□□□□ -1.7
SOX6-217ENST00000533870 TBX2Q13207 712 aaPredicted RBP4.45□□□□□ -1.7
SOX6-217ENST00000533870 TCIRG1Q13488 830 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 TRPC3Q13507 836 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 UBE4AQ14139 1066 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 EDRF1Q3B7T1 1238 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 IFIT1BQ5T764 474 aaKnown RBP4.45□□□□□ -1.7
SOX6-217ENST00000533870 ANKRD20A3Q5VUR7 823 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 PEX26Q7Z412 305 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 MYOCDQ8IZQ8 938 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 ZNF444Q8N0Y2 327 aaPredicted RBP4.45□□□□□ -1.7
SOX6-217ENST00000533870 MID2Q9UJV3 735 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 TET3O43151 1660 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 KDM6BO15054 1643 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 LARGE1O95461 756 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 SCG2P13521 617 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 PDE6AP16499 860 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 FOSBP53539 338 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 PTPN12Q05209 780 aaKnown RBP4.45□□□□□ -1.7
SOX6-217ENST00000533870 STRN3Q13033 797 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 SEPT6Q14141 434 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 NCAPHQ15003 741 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 PPP1R7Q15435 360 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 HIBCHQ6NVY1 386 aaPredicted RBP4.45□□□□□ -1.7
SOX6-217ENST00000533870 CCDC13Q8IYE1 715 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 PLA2G12BQ9BX93 195 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 FRMD8Q9BZ67 464 aaPredicted RBP4.45□□□□□ -1.7
SOX6-217ENST00000533870 EPN3Q9H201 632 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 PCDH11XQ9BZA7 1347 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 PCDH11YQ9BZA8 1340 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 GOLGA8QA0A0J9YX86 632 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 GOLGA8OA6NCC3 632 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 GOLGA8NF8WBI6 632 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 HSPA9P38646 679 aaKnown RBP4.45□□□□□ -1.7
SOX6-217ENST00000533870 STAT1P42224 750 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 VSNL1P62760 191 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 ZBTB17Q13105 803 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 KRT24Q2M2I5 525 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 GRIPAP1Q4V328 841 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 SYDE1Q6ZW31 735 aaPredicted RBP4.45□□□□□ -1.7
SOX6-217ENST00000533870 NLRP14Q86W24 1093 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 ADSSL1Q8N142 457 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 SLC52A2Q9HAB3 445 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 INTS9Q9NV88 658 aaKnown RBP4.45□□□□□ -1.7
SOX6-217ENST00000533870 CEP72Q9P209 647 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 SCOCQ9UIL1 159 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 RNF17Q9BXT8 1623 aaKnown RBP4.44□□□□□ -1.7
SOX6-217ENST00000533870 COL3A1P02461 1466 aaPredicted RBP4.44□□□□□ -1.7
SOX6-217ENST00000533870 CEP104O60308 925 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 DCTN3O75935 186 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 ACADSP16219 412 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 CHRNA3P32297 505 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 ADRM1Q16186 407 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 TAF1DQ9H5J8 278 aaPredicted RBP4.44□□□□□ -1.7
SOX6-217ENST00000533870 ARMCX3Q9UH62 379 aaPredicted RBP4.44□□□□□ -1.7
SOX6-217ENST00000533870 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.44□□□□□ -1.7
SOX6-217ENST00000533870 CFAP74Q9C0B2 1584 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 HECW2Q9P2P5 1572 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 TSPY2A6NKD2 308 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 POLR2DO15514 142 aaKnown RBP4.44□□□□□ -1.7
SOX6-217ENST00000533870 CREB3O43889 395 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 ATP1A3P13637 1013 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 GAP43P17677 238 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 AFMP43652 599 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 PSMD7P51665 324 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 NR1I3Q14994 352 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 TRMT10CQ7L0Y3 403 aaKnown RBP4.44□□□□□ -1.7
SOX6-217ENST00000533870 DHX40Q8IX18 779 aaKnown RBP4.44□□□□□ -1.7
SOX6-217ENST00000533870 KLC4Q9NSK0 619 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms