RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 ACAD9Q9H845 621 aa11.05□□□□□ -0.64
PACS1-214ENST00000533811 RNF146Q9NTX7 359 aa11.05□□□□□ -0.64
PACS1-214ENST00000533811 COG6Q9Y2V7 657 aa11.05□□□□□ -0.64
PACS1-214ENST00000533811 CHD7Q9P2D1 2997 aa11.04□□□□□ -0.64
PACS1-214ENST00000533811 SOWAHBA6NEL2 793 aa11.04□□□□□ -0.64
PACS1-214ENST00000533811 ASB14A6NK59 587 aa11.04□□□□□ -0.64
PACS1-214ENST00000533811 ERC2O15083 957 aa11.04□□□□□ -0.64
PACS1-214ENST00000533811 HMMRO75330 724 aa11.04□□□□□ -0.64
PACS1-214ENST00000533811 PRDM1O75626 825 aa11.04□□□□□ -0.64
PACS1-214ENST00000533811 CA3P07451 260 aa11.04□□□□□ -0.64
PACS1-214ENST00000533811 ALAS1P13196 640 aa11.04□□□□□ -0.64
PACS1-214ENST00000533811 SMPD1P17405 629 aa11.04□□□□□ -0.64
PACS1-214ENST00000533811 ATP5JP18859 108 aa11.04□□□□□ -0.64
PACS1-214ENST00000533811 HOXD11P31277 338 aaPredicted RBP11.04□□□□□ -0.64
PACS1-214ENST00000533811 TTLL4Q14679 1199 aa11.04□□□□□ -0.64
PACS1-214ENST00000533811 SLFN13Q68D06 897 aa11.04□□□□□ -0.64
PACS1-214ENST00000533811 KRT40Q6A162 431 aa11.04□□□□□ -0.64
PACS1-214ENST00000533811 ZSCAN25Q6NSZ9 544 aa11.04□□□□□ -0.64
PACS1-214ENST00000533811 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.04□□□□□ -0.64
PACS1-214ENST00000533811 FBXO16Q8IX29 292 aaPredicted RBP11.04□□□□□ -0.64
PACS1-214ENST00000533811 ZNF444Q8N0Y2 327 aaPredicted RBP11.04□□□□□ -0.64
PACS1-214ENST00000533811 HAUS7Q99871 368 aa11.04□□□□□ -0.64
PACS1-214ENST00000533811 PDGFCQ9NRA1 345 aa11.04□□□□□ -0.64
PACS1-214ENST00000533811 MTCH2Q9Y6C9 303 aa11.04□□□□□ -0.64
PACS1-214ENST00000533811 GRIN2DO15399 1336 aa11.04□□□□□ -0.64
PACS1-214ENST00000533811 TMEM232C9JQI7 657 aa11.03□□□□□ -0.64
PACS1-214ENST00000533811 CYP2C9P11712 490 aa11.03□□□□□ -0.64
PACS1-214ENST00000533811 BMP3P12645 472 aa11.03□□□□□ -0.64
PACS1-214ENST00000533811 TDO2P48775 406 aa11.03□□□□□ -0.64
PACS1-214ENST00000533811 OAZ1P54368 228 aa11.03□□□□□ -0.64
PACS1-214ENST00000533811 FAM47CQ5HY64 1035 aa11.03□□□□□ -0.64
PACS1-214ENST00000533811 TMEM31Q5JXX7 168 aa11.03□□□□□ -0.64
PACS1-214ENST00000533811 FAM133AQ8N9E0 248 aa11.03□□□□□ -0.64
PACS1-214ENST00000533811 ARNTL2Q8WYA1 636 aa11.03□□□□□ -0.64
PACS1-214ENST00000533811 CEP95Q96GE4 821 aa11.03□□□□□ -0.64
PACS1-214ENST00000533811 AGBL1Q96MI9 1066 aa11.03□□□□□ -0.64
PACS1-214ENST00000533811 A1CFQ9NQ94 594 aaKnown RBP11.03□□□□□ -0.64
PACS1-214ENST00000533811 TRMT13Q9NUP7 481 aaKnown RBP11.03□□□□□ -0.64
PACS1-214ENST00000533811 GNEQ9Y223 722 aaKnown RBP11.03□□□□□ -0.64
PACS1-214ENST00000533811 REV3LO60673 3130 aa11.02□□□□□ -0.64
PACS1-214ENST00000533811 COL4A4P53420 1690 aaPredicted RBP11.02□□□□□ -0.64
PACS1-214ENST00000533811 LCTP09848 1927 aa11.02□□□□□ -0.65
PACS1-214ENST00000533811 FAM86C2PA6NEL3 165 aa11.02□□□□□ -0.65
PACS1-214ENST00000533811 EPOPA6NHQ4 379 aa11.02□□□□□ -0.65
PACS1-214ENST00000533811 RAB11FIP3O75154 756 aa11.02□□□□□ -0.65
PACS1-214ENST00000533811 TTLL1O95922 423 aa11.02□□□□□ -0.65
PACS1-214ENST00000533811 APPP05067 770 aa11.02□□□□□ -0.65
PACS1-214ENST00000533811 MYL3P08590 195 aa11.02□□□□□ -0.65
PACS1-214ENST00000533811 ACTN1P12814 892 aa11.02□□□□□ -0.65
PACS1-214ENST00000533811 STAT2P52630 851 aa11.02□□□□□ -0.65
PACS1-214ENST00000533811 SNAP25P60880 206 aa11.02□□□□□ -0.65
PACS1-214ENST00000533811 NKX3-2P78367 333 aa11.02□□□□□ -0.65
PACS1-214ENST00000533811 SBK1Q52WX2 424 aa11.02□□□□□ -0.65
PACS1-214ENST00000533811 TMEM63BQ5T3F8 832 aa11.02□□□□□ -0.65
PACS1-214ENST00000533811 NSMFQ6X4W1 530 aa11.02□□□□□ -0.65
PACS1-214ENST00000533811 KIAA1211Q6ZU35 1233 aa11.02□□□□□ -0.65
PACS1-214ENST00000533811 PPP1R13LQ8WUF5 828 aa11.02□□□□□ -0.65
PACS1-214ENST00000533811 TRERF1Q96PN7 1200 aa11.02□□□□□ -0.65
PACS1-214ENST00000533811 FTOQ9C0B1 505 aaKnown RBP eCLIP11.02□□□□□ -0.65
PACS1-214ENST00000533811 ALDH8A1Q9H2A2 487 aaPredicted RBP11.02□□□□□ -0.65
PACS1-214ENST00000533811 MTMR7Q9Y216 660 aa11.02□□□□□ -0.65
PACS1-214ENST00000533811 TRIP12Q14669 1992 aaPredicted RBP11.01□□□□□ -0.65
PACS1-214ENST00000533811 IGKV6D-41A0A0C4DH26 115 aa11.01□□□□□ -0.65
PACS1-214ENST00000533811 GSG1L2A8MUP6 293 aa11.01□□□□□ -0.65
PACS1-214ENST00000533811 PFKMP08237 780 aa11.01□□□□□ -0.65
PACS1-214ENST00000533811 TSPY3P0CV98 308 aa11.01□□□□□ -0.65
PACS1-214ENST00000533811 TSPY8P0CW00 308 aa11.01□□□□□ -0.65
PACS1-214ENST00000533811 IQSEC1Q6DN90 963 aa11.01□□□□□ -0.65
PACS1-214ENST00000533811 TET1Q8NFU7 2136 aa11.01□□□□□ -0.65
PACS1-214ENST00000533811 CHURC1Q8WUH1 139 aa11.01□□□□□ -0.65
PACS1-214ENST00000533811 HLA-CQ95604 372 aa11.01□□□□□ -0.65
PACS1-214ENST00000533811 STRBPQ96SI9 672 aaKnown RBP11.01□□□□□ -0.65
PACS1-214ENST00000533811 SEZ6LQ9BYH1 1024 aa11.01□□□□□ -0.65
PACS1-214ENST00000533811 ZNF287Q9HBT7 754 aa11.01□□□□□ -0.65
PACS1-214ENST00000533811 MTMR4Q9NYA4 1195 aa11.01□□□□□ -0.65
PACS1-214ENST00000533811 COG5Q9UP83 839 aa11.01□□□□□ -0.65
PACS1-214ENST00000533811 TANC1Q9C0D5 1861 aa11.01□□□□□ -0.65
PACS1-214ENST00000533811 TNKSO95271 1327 aa11.01□□□□□ -0.65
PACS1-214ENST00000533811 BRWD1Q9NSI6 2320 aa11.01□□□□□ -0.65
PACS1-214ENST00000533811 KIF28PB7ZC32 967 aa11□□□□□ -0.65
PACS1-214ENST00000533811 CCER2I3L3R5 266 aa11□□□□□ -0.65
PACS1-214ENST00000533811 ARHGEF15O94989 841 aa11□□□□□ -0.65
PACS1-214ENST00000533811 SUPT20HL2P0C7V6 817 aa11□□□□□ -0.65
PACS1-214ENST00000533811 FDX1P10109 184 aa11□□□□□ -0.65
PACS1-214ENST00000533811 SLC1A4P43007 532 aa11□□□□□ -0.65
PACS1-214ENST00000533811 CHMP4BP1P59074 171 aa11□□□□□ -0.65
PACS1-214ENST00000533811 TAP1Q03518 808 aa11□□□□□ -0.65
PACS1-214ENST00000533811 TKFCQ3LXA3 575 aa11□□□□□ -0.65
PACS1-214ENST00000533811 MUM1L1Q5H9M0 696 aa11□□□□□ -0.65
PACS1-214ENST00000533811 TAPT1Q6NXT6 567 aa11□□□□□ -0.65
PACS1-214ENST00000533811 KCTD1Q719H9 257 aa11□□□□□ -0.65
PACS1-214ENST00000533811 FAM160B2Q86V87 743 aa11□□□□□ -0.65
PACS1-214ENST00000533811 RPAP2Q8IXW5 612 aaPredicted RBP11□□□□□ -0.65
PACS1-214ENST00000533811 GMCL1P1Q8NEA9 526 aa11□□□□□ -0.65
PACS1-214ENST00000533811 MKL1Q969V6 931 aa11□□□□□ -0.65
PACS1-214ENST00000533811 VWCEQ96DN2 955 aa11□□□□□ -0.65
PACS1-214ENST00000533811 PURBQ96QR8 312 aaKnown RBP11□□□□□ -0.65
PACS1-214ENST00000533811 SLC9A7Q96T83 725 aa11□□□□□ -0.65
PACS1-214ENST00000533811 EPB41L4AQ9HCS5 686 aaPredicted RBP11□□□□□ -0.65
PACS1-214ENST00000533811 GPHNQ9NQX3 736 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms