RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 ZNF746Q6NUN9 644 aaPredicted RBP9.3□□□□□ -0.92
CASP4-212ENST00000533730 JAZF1Q86VZ6 243 aa9.3□□□□□ -0.92
CASP4-212ENST00000533730 CLASRPQ8N2M8 674 aaKnown RBP9.3□□□□□ -0.92
CASP4-212ENST00000533730 ZGPATQ8N5A5 531 aaKnown RBP9.3□□□□□ -0.92
CASP4-212ENST00000533730 GPRASP2Q96D09 838 aa9.3□□□□□ -0.92
CASP4-212ENST00000533730 FAM8A1Q9UBU6 413 aa9.3□□□□□ -0.92
CASP4-212ENST00000533730 HCN2Q9UL51 889 aa9.3□□□□□ -0.92
CASP4-212ENST00000533730 MAST3O60307 1309 aa9.3□□□□□ -0.92
CASP4-212ENST00000533730 BNIP3LO60238 219 aa9.29□□□□□ -0.92
CASP4-212ENST00000533730 ADORA1P30542 326 aa9.29□□□□□ -0.92
CASP4-212ENST00000533730 GMPRP36959 345 aa9.29□□□□□ -0.92
CASP4-212ENST00000533730 PHKA1P46020 1223 aa9.29□□□□□ -0.92
CASP4-212ENST00000533730 ST13P50502 369 aaKnown RBP9.29□□□□□ -0.92
CASP4-212ENST00000533730 C1QTNF8P60827 252 aa9.29□□□□□ -0.92
CASP4-212ENST00000533730 KRT76Q01546 638 aa9.29□□□□□ -0.92
CASP4-212ENST00000533730 CHAF1AQ13111 956 aaPredicted RBP9.29□□□□□ -0.92
CASP4-212ENST00000533730 GAS6Q14393 721 aa9.29□□□□□ -0.92
CASP4-212ENST00000533730 KIF4BQ2VIQ3 1234 aa9.29□□□□□ -0.92
CASP4-212ENST00000533730 SAMD5Q5TGI4 173 aa9.29□□□□□ -0.92
CASP4-212ENST00000533730 ERMP1Q7Z2K6 904 aa9.29□□□□□ -0.92
CASP4-212ENST00000533730 KIAA0825Q8IV33 1275 aa9.29□□□□□ -0.92
CASP4-212ENST00000533730 ZNF280CQ8ND82 737 aa9.29□□□□□ -0.92
CASP4-212ENST00000533730 ZNF512BQ96KM6 892 aaPredicted RBP9.29□□□□□ -0.92
CASP4-212ENST00000533730 SUSD3Q96L08 255 aa9.29□□□□□ -0.92
CASP4-212ENST00000533730 LRRCC1Q9C099 1032 aa9.29□□□□□ -0.92
CASP4-212ENST00000533730 MYOZ2Q9NPC6 264 aa9.29□□□□□ -0.92
CASP4-212ENST00000533730 SALL1Q9NSC2 1324 aa9.29□□□□□ -0.92
CASP4-212ENST00000533730 ZNF646O15015 1829 aaPredicted RBP9.28□□□□□ -0.92
CASP4-212ENST00000533730 ADAMTSL1Q8N6G6 1762 aa9.28□□□□□ -0.92
CASP4-212ENST00000533730 TGFBR3LH3BV60 316 aa9.28□□□□□ -0.92
CASP4-212ENST00000533730 GPR25O00155 361 aa9.28□□□□□ -0.92
CASP4-212ENST00000533730 CENPBP07199 599 aaPredicted RBP9.28□□□□□ -0.92
CASP4-212ENST00000533730 HDAC1Q13547 482 aaPredicted RBP9.28□□□□□ -0.92
CASP4-212ENST00000533730 TBC1D10BQ4KMP7 808 aaPredicted RBP9.28□□□□□ -0.92
CASP4-212ENST00000533730 RNFT1Q5M7Z0 435 aa9.28□□□□□ -0.92
CASP4-212ENST00000533730 TTC39AQ5SRH9 613 aa9.28□□□□□ -0.92
CASP4-212ENST00000533730 SPTY2D1Q68D10 685 aaPredicted RBP9.28□□□□□ -0.92
CASP4-212ENST00000533730 FIGNL1Q6PIW4 674 aa9.28□□□□□ -0.92
CASP4-212ENST00000533730 LRRC69Q6ZNQ3 347 aa9.28□□□□□ -0.92
CASP4-212ENST00000533730 AACSQ86V21 672 aa9.28□□□□□ -0.92
CASP4-212ENST00000533730 CERS5Q8N5B7 392 aa9.28□□□□□ -0.92
CASP4-212ENST00000533730 SNX29Q8TEQ0 813 aa9.28□□□□□ -0.92
CASP4-212ENST00000533730 HSH2DQ96JZ2 352 aa9.28□□□□□ -0.92
CASP4-212ENST00000533730 DCTPP1Q9H773 170 aa9.28□□□□□ -0.92
CASP4-212ENST00000533730 PGAP2Q9UHJ9 254 aa9.28□□□□□ -0.92
CASP4-212ENST00000533730 USP20Q9Y2K6 914 aa9.28□□□□□ -0.92
CASP4-212ENST00000533730 PCDHGC4Q9Y5F7 938 aa9.28□□□□□ -0.92
CASP4-212ENST00000533730 MYH13Q9UKX3 1938 aa9.27□□□□□ -0.93
CASP4-212ENST00000533730 IFIT2P09913 472 aaKnown RBP9.27□□□□□ -0.93
CASP4-212ENST00000533730 RASGRF1Q13972 1273 aa9.27□□□□□ -0.93
CASP4-212ENST00000533730 TCEAL1Q15170 157 aa9.27□□□□□ -0.93
CASP4-212ENST00000533730 DLGAP5Q15398 846 aa9.27□□□□□ -0.93
CASP4-212ENST00000533730 NXPE4Q6UWF7 544 aa9.27□□□□□ -0.93
CASP4-212ENST00000533730 EXOC6Q8TAG9 804 aa9.27□□□□□ -0.93
CASP4-212ENST00000533730 TRPM4Q8TD43 1214 aa9.27□□□□□ -0.93
CASP4-212ENST00000533730 DCPSQ96C86 337 aaKnown RBP9.27□□□□□ -0.93
CASP4-212ENST00000533730 EAF2Q96CJ1 260 aaPredicted RBP9.27□□□□□ -0.93
CASP4-212ENST00000533730 GCC1Q96CN9 775 aa9.27□□□□□ -0.93
CASP4-212ENST00000533730 SPACA7Q96KW9 195 aa9.27□□□□□ -0.93
CASP4-212ENST00000533730 DBNDD2Q9BQY9 259 aa9.27□□□□□ -0.93
CASP4-212ENST00000533730 MXD3Q9BW11 206 aa9.27□□□□□ -0.93
CASP4-212ENST00000533730 MRIQ9BWK5 157 aa9.27□□□□□ -0.93
CASP4-212ENST00000533730 COL25A1Q9BXS0 654 aaPredicted RBP9.27□□□□□ -0.93
CASP4-212ENST00000533730 RWDD1Q9H446 243 aaPredicted RBP9.27□□□□□ -0.93
CASP4-212ENST00000533730 ZFYVE28Q9HCC9 887 aa9.27□□□□□ -0.93
CASP4-212ENST00000533730 CWC22Q9HCG8 908 aaKnown RBP9.27□□□□□ -0.93
CASP4-212ENST00000533730 NEUROD4Q9HD90 331 aa9.27□□□□□ -0.93
CASP4-212ENST00000533730 IL1RAPL2Q9NP60 686 aa9.27□□□□□ -0.93
CASP4-212ENST00000533730 NPHS2Q9NP85 383 aa9.27□□□□□ -0.93
CASP4-212ENST00000533730 DMGDHQ9UI17 866 aaKnown RBP9.27□□□□□ -0.93
CASP4-212ENST00000533730 DBNLQ9UJU6 430 aaKnown RBP9.27□□□□□ -0.93
CASP4-212ENST00000533730 TTF2Q9UNY4 1162 aaKnown RBP9.27□□□□□ -0.93
CASP4-212ENST00000533730 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.27□□□□□ -0.93
CASP4-212ENST00000533730 PITPNM2Q9BZ72 1349 aa9.27□□□□□ -0.93
CASP4-212ENST00000533730 SHTN1A0MZ66 631 aa9.26□□□□□ -0.93
CASP4-212ENST00000533730 F8W031 263 aaPredicted RBP9.26□□□□□ -0.93
CASP4-212ENST00000533730 ATXN7O15265 892 aaPredicted RBP9.26□□□□□ -0.93
CASP4-212ENST00000533730 WIPF1O43516 503 aa9.26□□□□□ -0.93
CASP4-212ENST00000533730 MYO1BO43795 1136 aa9.26□□□□□ -0.93
CASP4-212ENST00000533730 POLR3DP05423 398 aaPredicted RBP9.26□□□□□ -0.93
CASP4-212ENST00000533730 FAM157BP0CG42 384 aa9.26□□□□□ -0.93
CASP4-212ENST00000533730 CDC37L1Q7L3B6 337 aa9.26□□□□□ -0.93
CASP4-212ENST00000533730 ZNF438Q7Z4V0 828 aa9.26□□□□□ -0.93
CASP4-212ENST00000533730 CNTROBQ8N137 903 aa9.26□□□□□ -0.93
CASP4-212ENST00000533730 SPATA5Q8NB90 893 aa9.26□□□□□ -0.93
CASP4-212ENST00000533730 TEKT1Q969V4 418 aa9.26□□□□□ -0.93
CASP4-212ENST00000533730 GPATCH3Q96I76 525 aa9.26□□□□□ -0.93
CASP4-212ENST00000533730 CCDC8Q9H0W5 538 aaPredicted RBP9.26□□□□□ -0.93
CASP4-212ENST00000533730 JAG2Q9Y219 1238 aa9.26□□□□□ -0.93
CASP4-212ENST00000533730 WNT10BO00744 389 aa9.25□□□□□ -0.93
CASP4-212ENST00000533730 EFSO43281 561 aa9.25□□□□□ -0.93
CASP4-212ENST00000533730 PHACTR2O75167 634 aa9.25□□□□□ -0.93
CASP4-212ENST00000533730 IDH3AP50213 366 aa9.25□□□□□ -0.93
CASP4-212ENST00000533730 RBM5P52756 815 aaKnown RBP eCLIP9.25□□□□□ -0.93
CASP4-212ENST00000533730 TNP2Q05952 138 aa9.25□□□□□ -0.93
CASP4-212ENST00000533730 TRIP4Q15650 581 aaPredicted RBP9.25□□□□□ -0.93
CASP4-212ENST00000533730 HIF1AQ16665 826 aa9.25□□□□□ -0.93
CASP4-212ENST00000533730 IER5Q5VY09 327 aa9.25□□□□□ -0.93
CASP4-212ENST00000533730 MAP1SQ66K74 1059 aaPredicted RBP9.25□□□□□ -0.93
CASP4-212ENST00000533730 FOXR1Q6PIV2 292 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms