RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 LONRF3Q496Y0 759 aa10.99□□□□□ -0.65
CHKA-207ENST00000533728 FAM47AQ5JRC9 791 aa10.99□□□□□ -0.65
CHKA-207ENST00000533728 MFSD14BQ5SR56 506 aa10.99□□□□□ -0.65
CHKA-207ENST00000533728 TEX11Q8IYF3 940 aa10.99□□□□□ -0.65
CHKA-207ENST00000533728 SPC24Q8NBT2 197 aa10.99□□□□□ -0.65
CHKA-207ENST00000533728 CCDC150Q8NCX0 1101 aa10.99□□□□□ -0.65
CHKA-207ENST00000533728 CCDC12Q8WUD4 166 aaPredicted RBP10.99□□□□□ -0.65
CHKA-207ENST00000533728 PCDHA4Q9UN74 947 aa10.99□□□□□ -0.65
CHKA-207ENST00000533728 SIPA1L1O43166 1804 aa10.99□□□□□ -0.65
CHKA-207ENST00000533728 SHTN1A0MZ66 631 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 M0R2N6 131 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 DYNC1I1O14576 645 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 NRDCO43847 1150 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 SLFN14P0C7P3 912 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 TOP1P11387 765 aaKnown RBP10.98□□□□□ -0.65
CHKA-207ENST00000533728 ERCC5P28715 1186 aaPredicted RBP10.98□□□□□ -0.65
CHKA-207ENST00000533728 CDK8P49336 464 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 NLRP5P59047 1200 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 FOXK2Q01167 660 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 MORC3Q14149 939 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 DIXDC1Q155Q3 683 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 HHIPL2Q6UWX4 724 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 SH3RF1Q7Z6J0 888 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 LRRC8AQ8IWT6 810 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 BLIDQ8IZY5 108 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 CMTR1Q8N1G2 835 aaKnown RBP10.98□□□□□ -0.65
CHKA-207ENST00000533728 CCDC82Q8N4S0 544 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 ENOX1Q8TC92 643 aaKnown RBP10.98□□□□□ -0.65
CHKA-207ENST00000533728 SMARCE1Q969G3 411 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 CDCA5Q96FF9 252 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 ZNF830Q96NB3 372 aaPredicted RBP10.98□□□□□ -0.65
CHKA-207ENST00000533728 EYA3Q99504 573 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 CDX2Q99626 313 aaPredicted RBP10.98□□□□□ -0.65
CHKA-207ENST00000533728 SWAP70Q9UH65 585 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 MAD2L2Q9UI95 211 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 CNOT7Q9UIV1 285 aaKnown RBP10.98□□□□□ -0.65
CHKA-207ENST00000533728 PCDHA5Q9Y5H7 936 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 FLT1P17948 1338 aa10.98□□□□□ -0.65
CHKA-207ENST00000533728 ESYT2A0FGR8 921 aa10.97□□□□□ -0.65
CHKA-207ENST00000533728 POLR2DO15514 142 aaKnown RBP10.97□□□□□ -0.65
CHKA-207ENST00000533728 NMT2O60551 498 aa10.97□□□□□ -0.65
CHKA-207ENST00000533728 NPM3O75607 178 aaKnown RBP10.97□□□□□ -0.65
CHKA-207ENST00000533728 TUBB4AP04350 444 aa10.97□□□□□ -0.65
CHKA-207ENST00000533728 GTF2F1P35269 517 aaKnown RBP eCLIP10.97□□□□□ -0.65
CHKA-207ENST00000533728 LONP1P36776 959 aaKnown RBP10.97□□□□□ -0.65
CHKA-207ENST00000533728 HDLBPQ00341 1268 aaKnown RBP10.97□□□□□ -0.65
CHKA-207ENST00000533728 PNOCQ13519 176 aa10.97□□□□□ -0.65
CHKA-207ENST00000533728 GRIK5Q16478 980 aa10.97□□□□□ -0.65
CHKA-207ENST00000533728 CACTINQ8WUQ7 758 aaKnown RBP10.97□□□□□ -0.65
CHKA-207ENST00000533728 GSDMAQ96QA5 445 aa10.97□□□□□ -0.65
CHKA-207ENST00000533728 TMEM47Q9BQJ4 181 aa10.97□□□□□ -0.65
CHKA-207ENST00000533728 LRFN3Q9BTN0 628 aa10.97□□□□□ -0.65
CHKA-207ENST00000533728 CSRNP2Q9H175 543 aa10.97□□□□□ -0.65
CHKA-207ENST00000533728 MAN1B1Q9UKM7 699 aa10.97□□□□□ -0.65
CHKA-207ENST00000533728 PYCARDQ9ULZ3 195 aa10.97□□□□□ -0.65
CHKA-207ENST00000533728 R3HCC1Q9Y3T6 440 aaKnown RBP10.97□□□□□ -0.65
CHKA-207ENST00000533728 C6orf229H3BNL8 230 aa10.96□□□□□ -0.65
CHKA-207ENST00000533728 KIF2AO00139 706 aaPredicted RBP10.96□□□□□ -0.65
CHKA-207ENST00000533728 PPIP5K2O43314 1243 aa10.96□□□□□ -0.65
CHKA-207ENST00000533728 MYL1P05976 194 aa10.96□□□□□ -0.65
CHKA-207ENST00000533728 PRPHP41219 470 aa10.96□□□□□ -0.65
CHKA-207ENST00000533728 FANCCQ00597 558 aa10.96□□□□□ -0.65
CHKA-207ENST00000533728 GABPAQ06546 454 aa10.96□□□□□ -0.65
CHKA-207ENST00000533728 ZNF697Q5TEC3 545 aa10.96□□□□□ -0.65
CHKA-207ENST00000533728 FOXP4Q8IVH2 680 aaPredicted RBP10.96□□□□□ -0.65
CHKA-207ENST00000533728 MAPKAPK5Q8IW41 473 aa10.96□□□□□ -0.65
CHKA-207ENST00000533728 SULF1Q8IWU6 871 aa10.96□□□□□ -0.65
CHKA-207ENST00000533728 MYRIPQ8NFW9 859 aa10.96□□□□□ -0.65
CHKA-207ENST00000533728 SH3TC2Q8TF17 1288 aa10.96□□□□□ -0.65
CHKA-207ENST00000533728 DYNLL2Q96FJ2 89 aa10.96□□□□□ -0.65
CHKA-207ENST00000533728 GTPBP4Q9BZE4 634 aaKnown RBP10.96□□□□□ -0.65
CHKA-207ENST00000533728 ZMYND12Q9H0C1 365 aa10.96□□□□□ -0.65
CHKA-207ENST00000533728 BARHL2Q9NY43 387 aa10.96□□□□□ -0.65
CHKA-207ENST00000533728 SERTAD1Q9UHV2 236 aa10.96□□□□□ -0.65
CHKA-207ENST00000533728 DAGLAQ9Y4D2 1042 aa10.96□□□□□ -0.65
CHKA-207ENST00000533728 COL2A1P02458 1487 aaPredicted RBP10.95□□□□□ -0.66
CHKA-207ENST00000533728 IGKV6D-41A0A0C4DH26 115 aa10.95□□□□□ -0.66
CHKA-207ENST00000533728 PARP1P09874 1014 aaKnown RBP10.95□□□□□ -0.66
CHKA-207ENST00000533728 GNA11P29992 359 aa10.95□□□□□ -0.66
CHKA-207ENST00000533728 HOXA7P31268 230 aaPredicted RBP10.95□□□□□ -0.66
CHKA-207ENST00000533728 PLCD1P51178 756 aa10.95□□□□□ -0.66
CHKA-207ENST00000533728 CAP1Q01518 475 aa10.95□□□□□ -0.66
CHKA-207ENST00000533728 EVX2Q03828 476 aa10.95□□□□□ -0.66
CHKA-207ENST00000533728 PTGDRQ13258 359 aa10.95□□□□□ -0.66
CHKA-207ENST00000533728 CCDC144BQ3MJ40 725 aa10.95□□□□□ -0.66
CHKA-207ENST00000533728 ASPRV1Q53RT3 343 aa10.95□□□□□ -0.66
CHKA-207ENST00000533728 DNTTIP2Q5QJE6 756 aaKnown RBP10.95□□□□□ -0.66
CHKA-207ENST00000533728 KRT25Q7Z3Z0 450 aa10.95□□□□□ -0.66
CHKA-207ENST00000533728 PODNQ7Z5L7 613 aa10.95□□□□□ -0.66
CHKA-207ENST00000533728 MICALL2Q8IY33 904 aa10.95□□□□□ -0.66
CHKA-207ENST00000533728 IQUBQ8NA54 791 aa10.95□□□□□ -0.66
CHKA-207ENST00000533728 CCDC112Q8NEF3 446 aa10.95□□□□□ -0.66
CHKA-207ENST00000533728 ZC3H12CQ9C0D7 883 aaKnown RBP10.95□□□□□ -0.66
CHKA-207ENST00000533728 XPO4Q9C0E2 1151 aaKnown RBP10.95□□□□□ -0.66
CHKA-207ENST00000533728 EHD4Q9H223 541 aa10.95□□□□□ -0.66
CHKA-207ENST00000533728 HSD3B7Q9H2F3 369 aa10.95□□□□□ -0.66
CHKA-207ENST00000533728 MAGEF1Q9HAY2 307 aa10.95□□□□□ -0.66
CHKA-207ENST00000533728 IFNKQ9P0W0 207 aa10.95□□□□□ -0.66
CHKA-207ENST00000533728 NRBP1Q9UHY1 535 aa10.95□□□□□ -0.66
CHKA-207ENST00000533728 ZNRF3Q9ULT6 936 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms