RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 ABCG4Q9H172 646 aa6.09□□□□□ -1.44
CKAP5-212ENST00000533413 VPS33BQ9H267 617 aa6.09□□□□□ -1.44
CKAP5-212ENST00000533413 LCMT1Q9UIC8 334 aa6.09□□□□□ -1.44
CKAP5-212ENST00000533413 CCDC163A0A0D9SF12 145 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 A0A0G2JLW4 131 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 CCDC196A0A1B0GTZ2 297 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 H0Y3Z8 333 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 SASH1O94885 1247 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 OATP04181 439 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 GPTP24298 496 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 SNX16P57768 344 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 SLC7A5Q01650 507 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 PPP2R5AQ15172 486 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 TAF1CQ15572 869 aaPredicted RBP6.08□□□□□ -1.44
CKAP5-212ENST00000533413 TEX35Q5T0J7 233 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 PDXDC2PQ6P474 469 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 FBXO38Q6PIJ6 1188 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 SMCR8Q8TEV9 937 aaPredicted RBP6.08□□□□□ -1.44
CKAP5-212ENST00000533413 SUCLG2Q96I99 432 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 BEGAINQ9BUH8 593 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 PLA2G12BQ9BX93 195 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 BICC1Q9H694 974 aaKnown RBP6.08□□□□□ -1.44
CKAP5-212ENST00000533413 A0A1B0GUL6 1792 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 SHTN1A0MZ66 631 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 PPP1R3GB7ZBB8 358 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 ATP8B1O43520 1251 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 NBNO60934 754 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 AGR2O95994 175 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 BPIFB3P59826 476 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 CCZ1BP86790 482 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 CCZ1P86791 482 aaPredicted RBP6.08□□□□□ -1.44
CKAP5-212ENST00000533413 SLMAPQ14BN4 828 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 SF3B3Q15393 1217 aaKnown RBP6.08□□□□□ -1.44
CKAP5-212ENST00000533413 BRDTQ58F21 947 aaPredicted RBP6.08□□□□□ -1.44
CKAP5-212ENST00000533413 ANO1Q5XXA6 986 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 TMC6Q7Z403 805 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 ZNF589Q86UQ0 364 aaPredicted RBP6.08□□□□□ -1.44
CKAP5-212ENST00000533413 PACS2Q86VP3 889 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 MCF2L2Q86YR7 1114 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 STAG2Q8N3U4 1231 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 FBXO18Q8NFZ0 1043 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 TAF6LQ9Y6J9 622 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 LTBP1Q14766 1721 aa6.08□□□□□ -1.44
CKAP5-212ENST00000533413 SPEF2Q9C093 1822 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 A6NJY4 79 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 NEURL1BA8MQ27 555 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 PRPF3O43395 683 aaKnown RBP6.07□□□□□ -1.44
CKAP5-212ENST00000533413 PDE8AO60658 829 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 BBOX1O75936 387 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 PLA2G4AP47712 749 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 HSD17B7P56937 341 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 STK38Q15208 465 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 ACBD5Q5T8D3 534 aaPredicted RBP6.07□□□□□ -1.44
CKAP5-212ENST00000533413 RTKN2Q8IZC4 609 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 GOLGA5Q8TBA6 731 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 MRPS27Q92552 414 aaKnown RBP6.07□□□□□ -1.44
CKAP5-212ENST00000533413 LRRC2Q9BYS8 371 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 HOMER2Q9NSB8 354 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 TLR7Q9NYK1 1049 aaKnown RBP6.07□□□□□ -1.44
CKAP5-212ENST00000533413 RRP15Q9Y3B9 282 aaKnown RBP6.07□□□□□ -1.44
CKAP5-212ENST00000533413 CCDC88AQ3V6T2 1871 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 MED23Q9ULK4 1368 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 PTPDC1A2A3K4 754 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 MAP3K7O43318 606 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 PFKFB2O60825 505 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 RHOBTB3O94955 611 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 YBX3P16989 372 aaKnown RBP eCLIP6.07□□□□□ -1.447e-7■□□□□ 9.6
CKAP5-212ENST00000533413 TNFAIP3P21580 790 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 MAPK1P28482 360 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 GUCY1B3Q02153 619 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 SCRN1Q12765 414 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 COL9A3Q14050 684 aaPredicted RBP6.07□□□□□ -1.44
CKAP5-212ENST00000533413 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.07□□□□□ -1.441e-82■■■■■ 113.7
CKAP5-212ENST00000533413 CCDC152Q4G0S7 254 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 MCMDC2Q4G0Z9 681 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 MYSM1Q5VVJ2 828 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 MCTP2Q6DN12 878 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 TMCO3Q6UWJ1 677 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 DHX32Q7L7V1 743 aaKnown RBP6.07□□□□□ -1.44
CKAP5-212ENST00000533413 DHX40Q8IX18 779 aaKnown RBP6.07□□□□□ -1.44
CKAP5-212ENST00000533413 USP28Q96RU2 1077 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 MAP3K14Q99558 947 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.07□□□□□ -1.445e-8■■■□□ 17.1
CKAP5-212ENST00000533413 C12orf49Q9H741 205 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 A1CFQ9NQ94 594 aaKnown RBP6.07□□□□□ -1.44
CKAP5-212ENST00000533413 FANCLQ9NW38 375 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 BCS1LQ9Y276 419 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 MAFBQ9Y5Q3 323 aaPredicted RBP6.07□□□□□ -1.44
CKAP5-212ENST00000533413 UTYO14607 1347 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 H7C1W4 665 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 ABL1P00519 1130 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 XRCC5P13010 732 aaKnown RBP6.07□□□□□ -1.44
CKAP5-212ENST00000533413 CHRNA5P30532 468 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 ERCC6LQ2NKX8 1250 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 COBLL1Q53SF7 1204 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 FAM83BQ5T0W9 1011 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 FAM117BQ6P1L5 589 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 SUPT20HQ8NEM7 779 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 GABPB2Q8TAK5 448 aaPredicted RBP6.07□□□□□ -1.44
CKAP5-212ENST00000533413 SMARCC2Q8TAQ2 1214 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms