RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 CALM3P0DP25 149 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 ASIC2Q16515 512 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 MUM1L1Q5H9M0 696 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 SNRNP27Q8WVK2 155 aaKnown RBP8.56□□□□□ -1.04
CSRP1-218ENST00000533402 COQ7Q99807 217 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 MYO1AQ9UBC5 1043 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 BLVRAP53004 296 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 RAD23BP54727 409 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 FAM173BQ6P4H8 233 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 TBC1D23Q9NUY8 699 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 ZNF189O75820 626 aaPredicted RBP8.56□□□□□ -1.04
CSRP1-218ENST00000533402 DRP2Q13474 957 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 JARID2Q92833 1246 aaPredicted RBP8.56□□□□□ -1.04
CSRP1-218ENST00000533402 LRGUKQ96M69 825 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 KCNK3O14649 394 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 THAP12O43422 761 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 CEBPAP49715 358 aaPredicted RBP8.56□□□□□ -1.04
CSRP1-218ENST00000533402 PAK1Q13153 545 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 PLS1Q14651 629 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 TRIM60Q495X7 471 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 CACYBPQ9HB71 228 aaKnown RBP8.56□□□□□ -1.04
CSRP1-218ENST00000533402 BCORL1Q5H9F3 1711 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 NCOA3Q9Y6Q9 1424 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 SLC35F6Q8N357 371 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 ATP6V0A1Q93050 837 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 CEP19Q96LK0 163 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 KRT8P05787 483 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 HARSP12081 509 aaKnown RBP8.56□□□□□ -1.04
CSRP1-218ENST00000533402 HNRNPH1P31943 449 aaKnown RBP8.56□□□□□ -1.04
CSRP1-218ENST00000533402 CDC37L1Q7L3B6 337 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 HEATR3Q7Z4Q2 680 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 TRIML1Q8N9V2 468 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 OR8K1Q8NGG5 319 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 ZCRB1Q8TBF4 217 aaKnown RBP8.56□□□□□ -1.04
CSRP1-218ENST00000533402 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.56□□□□□ -1.04
CSRP1-218ENST00000533402 ST7Q9NRC1 585 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 TAB2Q9NYJ8 693 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 KIAA0232Q92628 1395 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 ATP5HO75947 161 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 TYW1BQ6NUM6 668 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 RSBN1LQ6PCB5 846 aaPredicted RBP8.56□□□□□ -1.04
CSRP1-218ENST00000533402 CCDC125Q86Z20 511 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 DAB1O75553 588 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 TRPC1P48995 793 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 EP400NLQ6ZTU2 488 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 PLEKHM2Q8IWE5 1019 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.55□□□□□ -1.04
CSRP1-218ENST00000533402 MAK16Q9BXY0 300 aaKnown RBP8.55□□□□□ -1.04
CSRP1-218ENST00000533402 DPH5Q9H2P9 285 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 KAT14Q9H8E8 782 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 C6orf50Q9HD87 102 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 PACSIN2Q9UNF0 486 aaPredicted RBP8.55□□□□□ -1.04
CSRP1-218ENST00000533402 LMNB1P20700 586 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 PPP1R2P41236 205 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 MYSM1Q5VVJ2 828 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 ARHGEF18Q6ZSZ5 1173 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 MYLK4Q86YV6 388 aaPredicted RBP8.55□□□□□ -1.04
CSRP1-218ENST00000533402 MAPK13O15264 365 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 DIAPH2O60879 1101 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 IL17RAQ96F46 866 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 NAP1L4Q99733 375 aaKnown RBP8.55□□□□□ -1.04
CSRP1-218ENST00000533402 EFHD1Q9BUP0 239 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.55□□□□□ -1.04
CSRP1-218ENST00000533402 ZNF229Q9UJW7 825 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 POLR2DO15514 142 aaKnown RBP8.55□□□□□ -1.04
CSRP1-218ENST00000533402 MEFVO15553 781 aaPredicted RBP8.55□□□□□ -1.04
CSRP1-218ENST00000533402 CORO7P57737 925 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 CREB3L3Q68CJ9 461 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 MFSD6Q6ZSS7 791 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 CSGALNACT2Q8N6G5 542 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 B4GALNT2Q8NHY0 566 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 HIC2Q96JB3 615 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 TCHHQ07283 1943 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 ANO1Q5XXA6 986 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 UHMK1Q8TAS1 419 aaKnown RBP8.55□□□□□ -1.04
CSRP1-218ENST00000533402 SPATA17Q96L03 361 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 RUNDC3BQ96NL0 473 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 KRT23Q9C075 422 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 FTOQ9C0B1 505 aaKnown RBP eCLIP8.55□□□□□ -1.04
CSRP1-218ENST00000533402 NDEL1Q9GZM8 345 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 EPB41L5Q9HCM4 733 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 KIAA1468Q9P260 1216 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 IQCA1LA6NCM1 817 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 TMCC1O94876 653 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 TTC4O95801 387 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 DMPKQ09013 629 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 RTN1Q16799 776 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 KIAA0825Q8IV33 1275 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 TDRD7Q8NHU6 1098 aaKnown RBP8.55□□□□□ -1.04
CSRP1-218ENST00000533402 KCNG1Q9UIX4 513 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 AGTPBP1Q9UPW5 1226 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 SUPT3HO75486 399 aa8.55□□□□□ -1.04
CSRP1-218ENST00000533402 ELAC2Q9BQ52 826 aaKnown RBP8.55□□□□□ -1.04
CSRP1-218ENST00000533402 TULP4Q9NRJ4 1543 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 TSPY2A6NKD2 308 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 GIPC1O14908 333 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 WBP4O75554 376 aaKnown RBP8.54□□□□□ -1.04
CSRP1-218ENST00000533402 TSPY3P0CV98 308 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 TSPY8P0CW00 308 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 SERPINB3P29508 390 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms