RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 CLEC10AQ8IUN9 316 aa13.47□□□□□ -0.25
TRAPPC4-213ENST00000533149 SCLYQ96I15 445 aa13.47□□□□□ -0.25
TRAPPC4-213ENST00000533149 AGBL1Q96MI9 1066 aa13.47□□□□□ -0.25
TRAPPC4-213ENST00000533149 CCDC8Q9H0W5 538 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC4-213ENST00000533149 OSBPL3Q9H4L5 887 aa13.47□□□□□ -0.25
TRAPPC4-213ENST00000533149 SUPT20HL2P0C7V6 817 aa13.46□□□□□ -0.25
TRAPPC4-213ENST00000533149 AKR1B1P15121 316 aa13.46□□□□□ -0.25
TRAPPC4-213ENST00000533149 MX1P20591 662 aa13.46□□□□□ -0.25
TRAPPC4-213ENST00000533149 FSCN1Q16658 493 aaKnown RBP13.46□□□□□ -0.25
TRAPPC4-213ENST00000533149 ANKRD35Q8N283 1001 aa13.46□□□□□ -0.25
TRAPPC4-213ENST00000533149 VWCEQ96DN2 955 aa13.46□□□□□ -0.25
TRAPPC4-213ENST00000533149 SLF1Q9BQI6 1058 aa13.46□□□□□ -0.25
TRAPPC4-213ENST00000533149 AP5M1Q9H0R1 490 aa13.46□□□□□ -0.25
TRAPPC4-213ENST00000533149 KANSL2Q9H9L4 492 aa13.46□□□□□ -0.25
TRAPPC4-213ENST00000533149 GRIN2DO15399 1336 aa13.45□□□□□ -0.26
TRAPPC4-213ENST00000533149 ATP2A1O14983 1001 aa13.45□□□□□ -0.26
TRAPPC4-213ENST00000533149 EEF2P13639 858 aaKnown RBP13.45□□□□□ -0.26
TRAPPC4-213ENST00000533149 RFC2P35250 354 aa13.45□□□□□ -0.26
TRAPPC4-213ENST00000533149 LEXMQ3ZCV2 418 aa13.45□□□□□ -0.26
TRAPPC4-213ENST00000533149 FAM83BQ5T0W9 1011 aa13.45□□□□□ -0.26
TRAPPC4-213ENST00000533149 TTC22Q5TAA0 569 aa13.45□□□□□ -0.26
TRAPPC4-213ENST00000533149 TSHZ3Q63HK5 1081 aa13.45□□□□□ -0.26
TRAPPC4-213ENST00000533149 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.45□□□□□ -0.26
TRAPPC4-213ENST00000533149 HERC6Q8IVU3 1022 aa13.45□□□□□ -0.26
TRAPPC4-213ENST00000533149 UBE2ZQ9H832 354 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC4-213ENST00000533149 FBXO40Q9UH90 709 aa13.45□□□□□ -0.26
TRAPPC4-213ENST00000533149 RIPK3Q9Y572 518 aa13.45□□□□□ -0.26
TRAPPC4-213ENST00000533149 REV3LO60673 3130 aa13.45□□□□□ -0.26
TRAPPC4-213ENST00000533149 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC4-213ENST00000533149 RAD21O60216 631 aa13.44□□□□□ -0.26
TRAPPC4-213ENST00000533149 LPXNO60711 386 aa13.44□□□□□ -0.26
TRAPPC4-213ENST00000533149 EVX2Q03828 476 aa13.44□□□□□ -0.26
TRAPPC4-213ENST00000533149 PUS10Q3MIT2 529 aaKnown RBP13.44□□□□□ -0.26
TRAPPC4-213ENST00000533149 BMP2KLQ5H9B9 411 aa13.44□□□□□ -0.26
TRAPPC4-213ENST00000533149 DEFB128Q7Z7B8 93 aa13.44□□□□□ -0.26
TRAPPC4-213ENST00000533149 TLK2Q86UE8 772 aa13.44□□□□□ -0.26
TRAPPC4-213ENST00000533149 CCDC144CPQ8IYA2 1237 aa13.44□□□□□ -0.26
TRAPPC4-213ENST00000533149 KATNBL1Q9H079 304 aa13.44□□□□□ -0.26
TRAPPC4-213ENST00000533149 ALDH8A1Q9H2A2 487 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC4-213ENST00000533149 DCP1AQ9NPI6 582 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC4-213ENST00000533149 ECHDC1Q9NTX5 307 aa13.44□□□□□ -0.26
TRAPPC4-213ENST00000533149 TLR7Q9NYK1 1049 aaKnown RBP13.44□□□□□ -0.26
TRAPPC4-213ENST00000533149 DBNLQ9UJU6 430 aaKnown RBP13.44□□□□□ -0.26
TRAPPC4-213ENST00000533149 GNEQ9Y223 722 aaKnown RBP13.44□□□□□ -0.26
TRAPPC4-213ENST00000533149 CTDP1Q9Y5B0 961 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC4-213ENST00000533149 ZNF536O15090 1300 aa13.44□□□□□ -0.26
TRAPPC4-213ENST00000533149 NAV1Q8NEY1 1877 aa13.43□□□□□ -0.26
TRAPPC4-213ENST00000533149 DCXO43602 365 aa13.43□□□□□ -0.26
TRAPPC4-213ENST00000533149 ZBED4O75132 1171 aa13.43□□□□□ -0.26
TRAPPC4-213ENST00000533149 GSPT1P15170 499 aaKnown RBP13.43□□□□□ -0.26
TRAPPC4-213ENST00000533149 SLC4A3P48751 1232 aa13.43□□□□□ -0.26
TRAPPC4-213ENST00000533149 PRPF38AQ8NAV1 312 aaKnown RBP13.43□□□□□ -0.26
TRAPPC4-213ENST00000533149 CHST13Q8NET6 341 aa13.43□□□□□ -0.26
TRAPPC4-213ENST00000533149 DYNLL2Q96FJ2 89 aa13.43□□□□□ -0.26
TRAPPC4-213ENST00000533149 GPATCH3Q96I76 525 aa13.43□□□□□ -0.26
TRAPPC4-213ENST00000533149 ANTXR1Q9H6X2 564 aa13.43□□□□□ -0.26
TRAPPC4-213ENST00000533149 Q9Y3F1 56 aa13.43□□□□□ -0.26
TRAPPC4-213ENST00000533149 ASTN1O14525 1302 aa13.43□□□□□ -0.26
TRAPPC4-213ENST00000533149 TTC41PQ6P2S7 1318 aa13.43□□□□□ -0.26
TRAPPC4-213ENST00000533149 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC4-213ENST00000533149 ST18O60284 1047 aa13.42□□□□□ -0.26
TRAPPC4-213ENST00000533149 ARHGEF15O94989 841 aa13.42□□□□□ -0.26
TRAPPC4-213ENST00000533149 CYP2D6P10635 497 aa13.42□□□□□ -0.26
TRAPPC4-213ENST00000533149 KCNA5P22460 613 aa13.42□□□□□ -0.26
TRAPPC4-213ENST00000533149 PSMC6P62333 389 aa13.42□□□□□ -0.26
TRAPPC4-213ENST00000533149 TTF1Q15361 905 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC4-213ENST00000533149 PTCRAQ6ISU1 281 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC4-213ENST00000533149 AMOTL1Q8IY63 956 aa13.42□□□□□ -0.26
TRAPPC4-213ENST00000533149 CPXCR1Q8N123 301 aa13.42□□□□□ -0.26
TRAPPC4-213ENST00000533149 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC4-213ENST00000533149 SDR42E1Q8WUS8 393 aa13.42□□□□□ -0.26
TRAPPC4-213ENST00000533149 FGD4Q96M96 766 aa13.42□□□□□ -0.26
TRAPPC4-213ENST00000533149 POTEB3A0JP26 581 aa13.41□□□□□ -0.26
TRAPPC4-213ENST00000533149 ASB14A6NK59 587 aa13.41□□□□□ -0.26
TRAPPC4-213ENST00000533149 DYNC1LI2O43237 492 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC4-213ENST00000533149 BAIAP3O94812 1187 aa13.41□□□□□ -0.26
TRAPPC4-213ENST00000533149 CDK8P49336 464 aa13.41□□□□□ -0.26
TRAPPC4-213ENST00000533149 FOXK2Q01167 660 aa13.41□□□□□ -0.26
TRAPPC4-213ENST00000533149 SLC9C2Q5TAH2 1124 aa13.41□□□□□ -0.26
TRAPPC4-213ENST00000533149 POTEBQ6S5H4 581 aa13.41□□□□□ -0.26
TRAPPC4-213ENST00000533149 RETREG2Q8NC44 543 aa13.41□□□□□ -0.26
TRAPPC4-213ENST00000533149 PI4K2BQ8TCG2 481 aa13.41□□□□□ -0.26
TRAPPC4-213ENST00000533149 MFSD14AQ96MC6 490 aa13.41□□□□□ -0.26
TRAPPC4-213ENST00000533149 BACH2Q9BYV9 841 aa13.41□□□□□ -0.26
TRAPPC4-213ENST00000533149 FTOQ9C0B1 505 aaKnown RBP eCLIP13.41□□□□□ -0.26
TRAPPC4-213ENST00000533149 TNKSO95271 1327 aa13.41□□□□□ -0.26
TRAPPC4-213ENST00000533149 GRXCR2A6NFK2 248 aa13.4□□□□□ -0.26
TRAPPC4-213ENST00000533149 CYP2C9P11712 490 aa13.4□□□□□ -0.26
TRAPPC4-213ENST00000533149 IL9P15248 144 aa13.4□□□□□ -0.26
TRAPPC4-213ENST00000533149 SDSP20132 328 aa13.4□□□□□ -0.26
TRAPPC4-213ENST00000533149 KCNJ6P48051 423 aa13.4□□□□□ -0.26
TRAPPC4-213ENST00000533149 OAZ1P54368 228 aa13.4□□□□□ -0.26
TRAPPC4-213ENST00000533149 C8orf34Q49A92 452 aa13.4□□□□□ -0.26
TRAPPC4-213ENST00000533149 IQSEC1Q6DN90 963 aa13.4□□□□□ -0.26
TRAPPC4-213ENST00000533149 GDPD5Q8WTR4 605 aa13.4□□□□□ -0.26
TRAPPC4-213ENST00000533149 ATP8A2Q9NTI2 1148 aa13.4□□□□□ -0.26
TRAPPC4-213ENST00000533149 TRMT13Q9NUP7 481 aaKnown RBP13.4□□□□□ -0.26
TRAPPC4-213ENST00000533149 PITPNM1O00562 1244 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 IQCF3P0C7M6 154 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 PDE6AP16499 860 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms