RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 DSCC1Q9BVC3 393 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 MOV10L1Q9BXT6 1211 aaKnown RBP12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 INCENPQ9NQS7 918 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 TOMM22Q9NS69 142 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 MTCH2Q9Y6C9 303 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 MYH4Q9Y623 1939 aa12.01□□□□□ -0.49
CHMP4A-206ENST00000533011 ZNF213O14771 459 aa12.01□□□□□ -0.49
CHMP4A-206ENST00000533011 PGK1P00558 417 aa12.01□□□□□ -0.49
CHMP4A-206ENST00000533011 PCP11498 1178 aaKnown RBP12.01□□□□□ -0.49
CHMP4A-206ENST00000533011 FCER1AP12319 257 aa12.01□□□□□ -0.49
CHMP4A-206ENST00000533011 CHMLP26374 656 aa12.01□□□□□ -0.49
CHMP4A-206ENST00000533011 HAND2P61296 217 aa12.01□□□□□ -0.49
CHMP4A-206ENST00000533011 MFSD6Q6ZSS7 791 aa12.01□□□□□ -0.49
CHMP4A-206ENST00000533011 RPUSD2Q8IZ73 545 aaKnown RBP12.01□□□□□ -0.49
CHMP4A-206ENST00000533011 PCSK9Q8NBP7 692 aaKnown RBP12.01□□□□□ -0.49
CHMP4A-206ENST00000533011 SEZ6LQ9BYH1 1024 aa12.01□□□□□ -0.49
CHMP4A-206ENST00000533011 SPATC1LQ9H0A9 340 aa12.01□□□□□ -0.49
CHMP4A-206ENST00000533011 RNF41Q9H4P4 317 aaPredicted RBP12.01□□□□□ -0.49
CHMP4A-206ENST00000533011 RAD50Q92878 1312 aa12.01□□□□□ -0.49
CHMP4A-206ENST00000533011 A0A0G2JMZ2 1700 aa12□□□□□ -0.49
CHMP4A-206ENST00000533011 ZNF236Q9UL36 1845 aa12□□□□□ -0.49
CHMP4A-206ENST00000533011 FAM86C2PA6NEL3 165 aa12□□□□□ -0.49
CHMP4A-206ENST00000533011 NDUFB10O96000 172 aa12□□□□□ -0.49
CHMP4A-206ENST00000533011 ERCC3P19447 782 aa12□□□□□ -0.49
CHMP4A-206ENST00000533011 IMMTQ16891 758 aaKnown RBP12□□□□□ -0.49
CHMP4A-206ENST00000533011 RRP12Q5JTH9 1297 aaKnown RBP12□□□□□ -0.49
CHMP4A-206ENST00000533011 FAM83BQ5T0W9 1011 aa12□□□□□ -0.49
CHMP4A-206ENST00000533011 LRRC47Q8N1G4 583 aaKnown RBP12□□□□□ -0.49
CHMP4A-206ENST00000533011 MSL3Q8N5Y2 521 aaKnown RBP12□□□□□ -0.49
CHMP4A-206ENST00000533011 GMCL1P1Q8NEA9 526 aa12□□□□□ -0.49
CHMP4A-206ENST00000533011 STAG1Q8WVM7 1258 aa12□□□□□ -0.49
CHMP4A-206ENST00000533011 TINF2Q9BSI4 451 aa12□□□□□ -0.49
CHMP4A-206ENST00000533011 IL17RBQ9NRM6 502 aa12□□□□□ -0.49
CHMP4A-206ENST00000533011 CTNNA3Q9UI47 895 aa12□□□□□ -0.49
CHMP4A-206ENST00000533011 ADAMTS5Q9UNA0 930 aa12□□□□□ -0.49
CHMP4A-206ENST00000533011 STX8Q9UNK0 236 aa12□□□□□ -0.49
CHMP4A-206ENST00000533011 YBX2Q9Y2T7 364 aaKnown RBP12□□□□□ -0.49
CHMP4A-206ENST00000533011 CACNA1AO00555 2505 aa12□□□□□ -0.49
CHMP4A-206ENST00000533011 PARP14Q460N5 1801 aa12□□□□□ -0.49
CHMP4A-206ENST00000533011 ST18O60284 1047 aa11.99□□□□□ -0.49
CHMP4A-206ENST00000533011 ADAMTS4O75173 837 aa11.99□□□□□ -0.49
CHMP4A-206ENST00000533011 SLC25A27O95847 323 aa11.99□□□□□ -0.49
CHMP4A-206ENST00000533011 CENPBP07199 599 aaPredicted RBP11.99□□□□□ -0.49
CHMP4A-206ENST00000533011 NT5C2P49902 561 aa11.99□□□□□ -0.49
CHMP4A-206ENST00000533011 SAMD1Q6SPF0 538 aaPredicted RBP11.99□□□□□ -0.49
CHMP4A-206ENST00000533011 KLHDC9Q8NEP7 349 aa11.99□□□□□ -0.49
CHMP4A-206ENST00000533011 ATG4CQ96DT6 458 aa11.99□□□□□ -0.49
CHMP4A-206ENST00000533011 NUP88Q99567 741 aaPredicted RBP11.99□□□□□ -0.49
CHMP4A-206ENST00000533011 IL25Q9H293 177 aa11.99□□□□□ -0.49
CHMP4A-206ENST00000533011 SPC25Q9HBM1 224 aa11.99□□□□□ -0.49
CHMP4A-206ENST00000533011 TCP11L1Q9NUJ3 509 aa11.99□□□□□ -0.49
CHMP4A-206ENST00000533011 FBXO28Q9NVF7 368 aa11.99□□□□□ -0.49
CHMP4A-206ENST00000533011 PPP1R9AQ9ULJ8 1098 aa11.99□□□□□ -0.49
CHMP4A-206ENST00000533011 CNPY2Q9Y2B0 182 aa11.99□□□□□ -0.49
CHMP4A-206ENST00000533011 SLC4A7Q9Y6M7 1214 aa11.99□□□□□ -0.49
CHMP4A-206ENST00000533011 LAMA4Q16363 1823 aa11.99□□□□□ -0.49
CHMP4A-206ENST00000533011 ARVCFO00192 962 aa11.98□□□□□ -0.49
CHMP4A-206ENST00000533011 NMT2O60551 498 aa11.98□□□□□ -0.49
CHMP4A-206ENST00000533011 ACRP10323 421 aa11.98□□□□□ -0.49
CHMP4A-206ENST00000533011 BMP3P12645 472 aa11.98□□□□□ -0.49
CHMP4A-206ENST00000533011 CST5P28325 142 aaPredicted RBP11.98□□□□□ -0.49
CHMP4A-206ENST00000533011 NOVP48745 357 aa11.98□□□□□ -0.49
CHMP4A-206ENST00000533011 PLS1Q14651 629 aa11.98□□□□□ -0.49
CHMP4A-206ENST00000533011 KCNA10Q16322 511 aa11.98□□□□□ -0.49
CHMP4A-206ENST00000533011 SLFN13Q68D06 897 aa11.98□□□□□ -0.49
CHMP4A-206ENST00000533011 CCSAPQ6IQ19 270 aaPredicted RBP11.98□□□□□ -0.49
CHMP4A-206ENST00000533011 TBC1D10CQ8IV04 446 aa11.98□□□□□ -0.49
CHMP4A-206ENST00000533011 PRPF38AQ8NAV1 312 aaKnown RBP11.98□□□□□ -0.49
CHMP4A-206ENST00000533011 ESR2Q92731 530 aa11.98□□□□□ -0.49
CHMP4A-206ENST00000533011 KHSRPQ92945 711 aaKnown RBP eCLIP11.98□□□□□ -0.49
CHMP4A-206ENST00000533011 FBXL18Q96ME1 805 aa11.98□□□□□ -0.49
CHMP4A-206ENST00000533011 SLF1Q9BQI6 1058 aa11.98□□□□□ -0.49
CHMP4A-206ENST00000533011 LMCD1Q9NZU5 365 aa11.98□□□□□ -0.49
CHMP4A-206ENST00000533011 FAM184BQ9ULE4 1060 aa11.98□□□□□ -0.49
CHMP4A-206ENST00000533011 A0A0U1RQG5 324 aaPredicted RBP11.97□□□□□ -0.49
CHMP4A-206ENST00000533011 VWA5AO00534 786 aa11.97□□□□□ -0.49
CHMP4A-206ENST00000533011 SGSM2O43147 1006 aa11.97□□□□□ -0.49
CHMP4A-206ENST00000533011 DUSP11O75319 330 aaKnown RBP11.97□□□□□ -0.49
CHMP4A-206ENST00000533011 TMEM132BQ14DG7 1078 aa11.97□□□□□ -0.49
CHMP4A-206ENST00000533011 BMP2KLQ5H9B9 411 aa11.97□□□□□ -0.49
CHMP4A-206ENST00000533011 TMEM67Q5HYA8 995 aa11.97□□□□□ -0.49
CHMP4A-206ENST00000533011 NCAPG2Q86XI2 1143 aa11.97□□□□□ -0.49
CHMP4A-206ENST00000533011 GJD3Q8N144 294 aa11.97□□□□□ -0.49
CHMP4A-206ENST00000533011 VTI1AQ96AJ9 217 aa11.97□□□□□ -0.49
CHMP4A-206ENST00000533011 GMCL1Q96IK5 515 aa11.97□□□□□ -0.49
CHMP4A-206ENST00000533011 TTC14Q96N46 770 aa11.97□□□□□ -0.49
CHMP4A-206ENST00000533011 UIMC1Q96RL1 719 aa11.97□□□□□ -0.49
CHMP4A-206ENST00000533011 CHD7Q9P2D1 2997 aa11.97□□□□□ -0.49
CHMP4A-206ENST00000533011 FEM1BQ9UK73 627 aa11.97□□□□□ -0.49
CHMP4A-206ENST00000533011 TRANK1O15050 2925 aa11.97□□□□□ -0.49
CHMP4A-206ENST00000533011 NEDD4P46934 1319 aa11.96□□□□□ -0.49
CHMP4A-206ENST00000533011 COL11A1P12107 1806 aaPredicted RBP11.96□□□□□ -0.49
CHMP4A-206ENST00000533011 PFKMP08237 780 aa11.96□□□□□ -0.49
CHMP4A-206ENST00000533011 ZNF865P0CJ78 1059 aaPredicted RBP11.96□□□□□ -0.49
CHMP4A-206ENST00000533011 TOP1P11387 765 aaKnown RBP11.96□□□□□ -0.49
CHMP4A-206ENST00000533011 MCCP23508 829 aa11.96□□□□□ -0.49
CHMP4A-206ENST00000533011 COPB2P35606 906 aa11.96□□□□□ -0.49
CHMP4A-206ENST00000533011 STAT3P40763 770 aa11.96□□□□□ -0.49
CHMP4A-206ENST00000533011 SLC1A4P43007 532 aa11.96□□□□□ -0.49
CHMP4A-206ENST00000533011 OTOP2Q7RTS6 562 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms