RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 RPGRQ92834 1020 aaKnown RBP9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 C7orf25Q9BPX7 421 aa9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 TTYH3Q9C0H2 523 aa9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 TTF2Q9UNY4 1162 aaKnown RBP9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 MAPK8IP1Q9UQF2 711 aa9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 SPATA31A6Q5VVP1 1343 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 BBOX1O75936 387 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 ABL1P00519 1130 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 TPM1P09493 284 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 PNMA6AP0CW24 399 aaPredicted RBP9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 PDHBP11177 359 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 GNA11P29992 359 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 DDR1Q08345 913 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 BMS1Q14692 1282 aaKnown RBP9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 CYP26C1Q6V0L0 522 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 NEK8Q86SG6 692 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 CABP7Q86V35 215 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 GPR161Q8N6U8 529 aaKnown RBP9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 TBC1D22AQ8WUA7 517 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 CCDC12Q8WUD4 166 aaPredicted RBP9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 DHTKD1Q96HY7 919 aaPredicted RBP9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 RBM17Q96I25 401 aaKnown RBP9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 GJD4Q96KN9 370 aaPredicted RBP9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 MTMR9Q96QG7 549 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 CRAMP1Q96RY5 1269 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 PIGSQ96S52 555 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 DNAJC7Q99615 494 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 UBXN6Q9BZV1 441 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 TRIM9Q9C026 710 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 EPC1Q9H2F5 836 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 C6orf50Q9HD87 102 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 LZTFL1Q9NQ48 299 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 REXO2Q9Y3B8 237 aaKnown RBP9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 DAGLAQ9Y4D2 1042 aa9.32□□□□□ -0.92
TRIM53BP-201ENST00000532912 ANKRD31Q8N7Z5 1873 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 TTC26A0AVF1 554 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 RASSF10A6NK89 507 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 USP17L5A8MUK1 530 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 hCG_1984214I3L0E3 225 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 KRT9P35527 623 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 PLA2G4AP47712 749 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 ST5P78524 1137 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 WDR59Q6PJI9 974 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 ZNF713Q8N859 430 aaPredicted RBP9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 ANKRD20A12PQ8NF67 263 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 TBCKQ8TEA7 893 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 RABGGTAQ92696 567 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 RRP36Q96EU6 259 aaKnown RBP9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 PLIN2Q99541 437 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 MTMR7Q9Y216 660 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 POLRMTO00411 1230 aaKnown RBP9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 PSMA7O14818 248 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 ATP8B1O43520 1251 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 KIF5CO60282 957 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 CCNT1O60563 726 aaKnown RBP9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 SRGNP10124 158 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 CCNE1P24864 410 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 UBXN1Q04323 297 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 STK4Q13043 487 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 MEA1Q16626 185 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 LETM2Q2VYF4 491 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 CC2D1AQ6P1N0 951 aaPredicted RBP9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 SRGAP1Q7Z6B7 1085 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 SLF2Q8IX21 1173 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 SLC35F6Q8N357 371 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 NOC3LQ8WTT2 800 aaKnown RBP9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 CHP1Q99653 195 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 BLOC1S4Q9NUP1 217 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 ARGLU1Q9NWB6 273 aaPredicted RBP9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 MTMR4Q9NYA4 1195 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 MYO1AQ9UBC5 1043 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 CDC23Q9UJX2 597 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 CAPN11Q9UMQ6 739 aa9.31□□□□□ -0.92
TRIM53BP-201ENST00000532912 SASH3O75995 380 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 TBC1D8O95759 1140 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 FXR2P51116 673 aaKnown RBP eCLIP9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 AMPD2Q01433 879 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 GRB10Q13322 594 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 TUBB2AQ13885 445 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 TERF2Q15554 542 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 MIIPQ5JXC2 388 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 TMCO3Q6UWJ1 677 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 ZNF662Q6ZS27 426 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 ZSCAN29Q8IWY8 852 aaPredicted RBP9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 REXO1Q8N1G1 1221 aaKnown RBP9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 CERS5Q8N5B7 392 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 KIAA0895Q8NCT3 520 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 GOLGA1Q92805 767 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 P2RX5Q93086 422 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 TRIM47Q96LD4 638 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 PNMA5Q96PV4 448 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 NUP88Q99567 741 aaPredicted RBP9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 TUBB2BQ9BVA1 445 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 PARD6BQ9BYG5 372 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 UBA5Q9GZZ9 404 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 DDX4Q9NQI0 724 aaKnown RBP9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 ST7Q9NRC1 585 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 TMEM260Q9NX78 707 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 NRXN2Q9P2S2 1712 aa9.3□□□□□ -0.92
TRIM53BP-201ENST00000532912 SUGT1Q9Y2Z0 365 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms