RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 CLEC4DQ8WXI8 215 aa20.94■□□□□ 0.94
SMG1-203ENST00000532700 UBA5Q9GZZ9 404 aa20.94■□□□□ 0.94
SMG1-203ENST00000532700 A0A1W2PQ45 241 aaPredicted RBP20.93■□□□□ 0.94
SMG1-203ENST00000532700 A0A1W2PQY0 241 aa20.93■□□□□ 0.94
SMG1-203ENST00000532700 BMP8BP34820 402 aa20.93■□□□□ 0.94
SMG1-203ENST00000532700 COL9A3Q14050 684 aaPredicted RBP20.93■□□□□ 0.94
SMG1-203ENST00000532700 NSMFQ6X4W1 530 aa20.93■□□□□ 0.94
SMG1-203ENST00000532700 SLC30A10Q6XR72 485 aa20.93■□□□□ 0.94
SMG1-203ENST00000532700 KLHDC9Q8NEP7 349 aa20.93■□□□□ 0.94
SMG1-203ENST00000532700 TTC14Q96N46 770 aa20.93■□□□□ 0.94
SMG1-203ENST00000532700 ZSCAN10Q96SZ4 725 aaPredicted RBP20.93■□□□□ 0.94
SMG1-203ENST00000532700 PDGFCQ9NRA1 345 aa20.93■□□□□ 0.94
SMG1-203ENST00000532700 MYH6P13533 1939 aa20.92■□□□□ 0.94
SMG1-203ENST00000532700 IMMTQ16891 758 aaKnown RBP20.92■□□□□ 0.94
SMG1-203ENST00000532700 TKFCQ3LXA3 575 aa20.92■□□□□ 0.94
SMG1-203ENST00000532700 STOX1Q6ZVD7 989 aa20.92■□□□□ 0.94
SMG1-203ENST00000532700 PNMA1Q8ND90 353 aa20.92■□□□□ 0.94
SMG1-203ENST00000532700 SENP2Q9HC62 589 aa20.92■□□□□ 0.94
SMG1-203ENST00000532700 FAM184BQ9ULE4 1060 aa20.92■□□□□ 0.94
SMG1-203ENST00000532700 TNKSO95271 1327 aa20.92■□□□□ 0.94
SMG1-203ENST00000532700 CYP21A2P08686 494 aa20.91■□□□□ 0.94
SMG1-203ENST00000532700 ITGB8P26012 769 aa20.91■□□□□ 0.94
SMG1-203ENST00000532700 BAATQ14032 418 aaPredicted RBP20.91■□□□□ 0.94
SMG1-203ENST00000532700 DGKHQ86XP1 1220 aa20.91■□□□□ 0.94
SMG1-203ENST00000532700 FBXO16Q8IX29 292 aaPredicted RBP20.91■□□□□ 0.94
SMG1-203ENST00000532700 ANKS1AQ92625 1134 aa20.91■□□□□ 0.94
SMG1-203ENST00000532700 RAD50Q92878 1312 aa20.91■□□□□ 0.94
SMG1-203ENST00000532700 ABHD16BQ9H3Z7 469 aa20.91■□□□□ 0.94
SMG1-203ENST00000532700 PDLIM7Q9NR12 457 aa20.91■□□□□ 0.94
SMG1-203ENST00000532700 TRIM43BA6NCK2 446 aa20.9■□□□□ 0.94
SMG1-203ENST00000532700 SGSM2O43147 1006 aa20.9■□□□□ 0.94
SMG1-203ENST00000532700 SEC23AQ15436 765 aa20.9■□□□□ 0.94
SMG1-203ENST00000532700 SLC35G1Q2M3R5 365 aa20.9■□□□□ 0.94
SMG1-203ENST00000532700 EEPD1Q7L9B9 569 aa20.9■□□□□ 0.94
SMG1-203ENST00000532700 TRIM43Q96BQ3 446 aaPredicted RBP20.9■□□□□ 0.94
SMG1-203ENST00000532700 UPF3AQ9H1J1 476 aaKnown RBP20.9■□□□□ 0.94
SMG1-203ENST00000532700 A0A1W2PPC1 479 aa20.89■□□□□ 0.93
SMG1-203ENST00000532700 DUSP11O75319 330 aaKnown RBP20.89■□□□□ 0.93
SMG1-203ENST00000532700 ACLYP53396 1101 aa20.89■□□□□ 0.93
SMG1-203ENST00000532700 BEX3Q00994 111 aa20.89■□□□□ 0.93
SMG1-203ENST00000532700 TLE2Q04725 743 aa20.89■□□□□ 0.93
SMG1-203ENST00000532700 KCNA10Q16322 511 aa20.89■□□□□ 0.93
SMG1-203ENST00000532700 TAPT1Q6NXT6 567 aa20.89■□□□□ 0.93
SMG1-203ENST00000532700 RNF180Q86T96 592 aa20.89■□□□□ 0.93
SMG1-203ENST00000532700 STAG2Q8N3U4 1231 aa20.89■□□□□ 0.93
SMG1-203ENST00000532700 UBE2OQ9C0C9 1292 aaKnown RBP20.89■□□□□ 0.93
SMG1-203ENST00000532700 USH1GQ495M9 461 aa20.88■□□□□ 0.93
SMG1-203ENST00000532700 IQCA1Q86XH1 822 aa20.88■□□□□ 0.93
SMG1-203ENST00000532700 TBC1D5Q92609 795 aa20.88■□□□□ 0.93
SMG1-203ENST00000532700 KAT14Q9H8E8 782 aa20.88■□□□□ 0.93
SMG1-203ENST00000532700 PRDM5Q9NQX1 630 aaPredicted RBP20.88■□□□□ 0.93
SMG1-203ENST00000532700 CTNNA3Q9UI47 895 aa20.88■□□□□ 0.93
SMG1-203ENST00000532700 C6orf222P0C671 652 aaPredicted RBP20.87■□□□□ 0.93
SMG1-203ENST00000532700 SMPD1P17405 629 aa20.87■□□□□ 0.93
SMG1-203ENST00000532700 C1orf53Q5VUE5 145 aa20.87■□□□□ 0.93
SMG1-203ENST00000532700 ADGRF4Q8IZF3 695 aa20.87■□□□□ 0.93
SMG1-203ENST00000532700 TDHQ8IZJ6 230 aa20.87■□□□□ 0.93
SMG1-203ENST00000532700 MORC4Q8TE76 937 aa20.87■□□□□ 0.93
SMG1-203ENST00000532700 GNEQ9Y223 722 aaKnown RBP20.87■□□□□ 0.93
SMG1-203ENST00000532700 WDR19Q8NEZ3 1342 aa20.86■□□□□ 0.93
SMG1-203ENST00000532700 PTPDC1A2A3K4 754 aa20.86■□□□□ 0.93
SMG1-203ENST00000532700 ASGR1P07306 291 aa20.86■□□□□ 0.93
SMG1-203ENST00000532700 CALML3P27482 149 aa20.86■□□□□ 0.93
SMG1-203ENST00000532700 CST5P28325 142 aaPredicted RBP20.86■□□□□ 0.93
SMG1-203ENST00000532700 ALDH5A1P51649 535 aaPredicted RBP20.86■□□□□ 0.93
SMG1-203ENST00000532700 GJA9P57773 515 aa20.86■□□□□ 0.93
SMG1-203ENST00000532700 ANTXR2P58335 489 aa20.86■□□□□ 0.93
SMG1-203ENST00000532700 CDC37Q16543 378 aaPredicted RBP20.86■□□□□ 0.93
SMG1-203ENST00000532700 CHST3Q7LGC8 479 aa20.86■□□□□ 0.93
SMG1-203ENST00000532700 KRT23Q9C075 422 aa20.86■□□□□ 0.93
SMG1-203ENST00000532700 ASB14A6NK59 587 aa20.85■□□□□ 0.93
SMG1-203ENST00000532700 PQBP1O60828 265 aaKnown RBP20.85■□□□□ 0.93
SMG1-203ENST00000532700 NEFLP07196 543 aa20.85■□□□□ 0.93
SMG1-203ENST00000532700 RPS6P62753 249 aaKnown RBP20.85■□□□□ 0.93
SMG1-203ENST00000532700 TNFAIP2Q03169 654 aa20.85■□□□□ 0.93
SMG1-203ENST00000532700 GPATCH4Q5T3I0 446 aaKnown RBP20.85■□□□□ 0.93
SMG1-203ENST00000532700 BADQ92934 168 aa20.85■□□□□ 0.93
SMG1-203ENST00000532700 TSEN34Q9BSV6 310 aaKnown RBP20.85■□□□□ 0.93
SMG1-203ENST00000532700 JMJD4Q9H9V9 463 aa20.85■□□□□ 0.93
SMG1-203ENST00000532700 COL20A1Q9P218 1284 aa20.85■□□□□ 0.93
SMG1-203ENST00000532700 E7EWF7 191 aa20.84■□□□□ 0.93
SMG1-203ENST00000532700 PPP1R11O60927 126 aaPredicted RBP20.84■□□□□ 0.93
SMG1-203ENST00000532700 EPHB4P54760 987 aa20.84■□□□□ 0.93
SMG1-203ENST00000532700 QRICH1Q2TAL8 776 aa20.84■□□□□ 0.93
SMG1-203ENST00000532700 C9orf50Q5SZB4 431 aa20.84■□□□□ 0.93
SMG1-203ENST00000532700 CNNM2Q9H8M5 875 aa20.84■□□□□ 0.93
SMG1-203ENST00000532700 GPHNQ9NQX3 736 aaPredicted RBP20.84■□□□□ 0.93
SMG1-203ENST00000532700 STARD7Q9NQZ5 370 aa20.84■□□□□ 0.93
SMG1-203ENST00000532700 OPLAHO14841 1288 aa20.83■□□□□ 0.93
SMG1-203ENST00000532700 NKX3-2P78367 333 aa20.83■□□□□ 0.93
SMG1-203ENST00000532700 FAAP100Q0VG06 881 aa20.83■□□□□ 0.93
SMG1-203ENST00000532700 ASPRV1Q53RT3 343 aa20.83■□□□□ 0.93
SMG1-203ENST00000532700 IFIT1BQ5T764 474 aaKnown RBP20.83■□□□□ 0.93
SMG1-203ENST00000532700 RNF207Q6ZRF8 634 aa20.83■□□□□ 0.93
SMG1-203ENST00000532700 TLK2Q86UE8 772 aa20.83■□□□□ 0.93
SMG1-203ENST00000532700 MAP4K1Q92918 833 aa20.83■□□□□ 0.93
SMG1-203ENST00000532700 UBAC1Q9BSL1 405 aa20.83■□□□□ 0.93
SMG1-203ENST00000532700 LSG1Q9H089 658 aaKnown RBP20.83■□□□□ 0.93
SMG1-203ENST00000532700 VAT1LQ9HCJ6 419 aa20.83■□□□□ 0.93
SMG1-203ENST00000532700 MAD2L2Q9UI95 211 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms