RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 RNF180Q86T96 592 aa22.28■■□□□ 1.16
SSH3-209ENST00000532600 UBE2OQ9C0C9 1292 aaKnown RBP22.28■■□□□ 1.16
SSH3-209ENST00000532600 ABHD16BQ9H3Z7 469 aa22.28■■□□□ 1.16
SSH3-209ENST00000532600 CTAGE5O15320 804 aa22.27■■□□□ 1.16
SSH3-209ENST00000532600 DUSP11O75319 330 aaKnown RBP22.27■■□□□ 1.16
SSH3-209ENST00000532600 SH3RF1Q7Z6J0 888 aa22.27■■□□□ 1.16
SSH3-209ENST00000532600 DGKHQ86XP1 1220 aa22.27■■□□□ 1.16
SSH3-209ENST00000532600 TDHQ8IZJ6 230 aa22.27■■□□□ 1.16
SSH3-209ENST00000532600 ANKS1AQ92625 1134 aa22.27■■□□□ 1.16
SSH3-209ENST00000532600 PDLIM7Q9NR12 457 aa22.27■■□□□ 1.16
SSH3-209ENST00000532600 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.26■■□□□ 1.15
SSH3-209ENST00000532600 NFIBO00712 420 aa22.26■■□□□ 1.15
SSH3-209ENST00000532600 GOLGA8HP0CJ92 632 aa22.26■■□□□ 1.15
SSH3-209ENST00000532600 PTGS1P23219 599 aa22.26■■□□□ 1.15
SSH3-209ENST00000532600 UPF3AQ9H1J1 476 aaKnown RBP22.26■■□□□ 1.15
SSH3-209ENST00000532600 CPVLQ9H3G5 476 aa22.26■■□□□ 1.15
SSH3-209ENST00000532600 ZSWIM5Q9P217 1185 aa22.26■■□□□ 1.15
SSH3-209ENST00000532600 TRIM43BA6NCK2 446 aa22.25■■□□□ 1.15
SSH3-209ENST00000532600 CHMLP26374 656 aa22.25■■□□□ 1.15
SSH3-209ENST00000532600 ACLYP53396 1101 aa22.25■■□□□ 1.15
SSH3-209ENST00000532600 TLE2Q04725 743 aa22.25■■□□□ 1.15
SSH3-209ENST00000532600 KCNA10Q16322 511 aa22.25■■□□□ 1.15
SSH3-209ENST00000532600 ENAHQ8N8S7 591 aaPredicted RBP22.25■■□□□ 1.15
SSH3-209ENST00000532600 CLEC4DQ8WXI8 215 aa22.25■■□□□ 1.15
SSH3-209ENST00000532600 TRIM43Q96BQ3 446 aaPredicted RBP22.25■■□□□ 1.15
SSH3-209ENST00000532600 TSEN34Q9BSV6 310 aaKnown RBP22.25■■□□□ 1.15
SSH3-209ENST00000532600 CST5P28325 142 aaPredicted RBP22.24■■□□□ 1.15
SSH3-209ENST00000532600 PTH1RQ03431 593 aa22.24■■□□□ 1.15
SSH3-209ENST00000532600 IMMTQ16891 758 aaKnown RBP22.24■■□□□ 1.15
SSH3-209ENST00000532600 LRIT3Q3SXY7 679 aa22.24■■□□□ 1.15
SSH3-209ENST00000532600 TMEM63BQ5T3F8 832 aa22.24■■□□□ 1.15
SSH3-209ENST00000532600 NSMFQ6X4W1 530 aa22.24■■□□□ 1.15
SSH3-209ENST00000532600 ZSCAN10Q96SZ4 725 aaPredicted RBP22.24■■□□□ 1.15
SSH3-209ENST00000532600 ITGB8P26012 769 aa22.23■■□□□ 1.15
SSH3-209ENST00000532600 GJA9P57773 515 aa22.23■■□□□ 1.15
SSH3-209ENST00000532600 NKX3-2P78367 333 aa22.23■■□□□ 1.15
SSH3-209ENST00000532600 BAATQ14032 418 aaPredicted RBP22.23■■□□□ 1.15
SSH3-209ENST00000532600 PNMA1Q8ND90 353 aa22.23■■□□□ 1.15
SSH3-209ENST00000532600 MORC4Q8TE76 937 aa22.23■■□□□ 1.15
SSH3-209ENST00000532600 UBA5Q9GZZ9 404 aa22.23■■□□□ 1.15
SSH3-209ENST00000532600 PDGFCQ9NRA1 345 aa22.23■■□□□ 1.15
SSH3-209ENST00000532600 CTNNA3Q9UI47 895 aa22.23■■□□□ 1.15
SSH3-209ENST00000532600 TAF6LQ9Y6J9 622 aa22.23■■□□□ 1.15
SSH3-209ENST00000532600 RAD50Q92878 1312 aa22.23■■□□□ 1.15
SSH3-209ENST00000532600 ASB14A6NK59 587 aa22.22■■□□□ 1.15
SSH3-209ENST00000532600 NT5C2P49902 561 aa22.22■■□□□ 1.15
SSH3-209ENST00000532600 TAPT1Q6NXT6 567 aa22.22■■□□□ 1.15
SSH3-209ENST00000532600 SLC30A10Q6XR72 485 aa22.22■■□□□ 1.15
SSH3-209ENST00000532600 CYB5R4Q7L1T6 521 aa22.22■■□□□ 1.15
SSH3-209ENST00000532600 PRDM5Q9NQX1 630 aaPredicted RBP22.22■■□□□ 1.15
SSH3-209ENST00000532600 GNEQ9Y223 722 aaKnown RBP22.22■■□□□ 1.15
SSH3-209ENST00000532600 TNKSO95271 1327 aa22.22■■□□□ 1.15
SSH3-209ENST00000532600 MOXD2PA6NHM9 499 aa22.21■■□□□ 1.15
SSH3-209ENST00000532600 C6orf222P0C671 652 aaPredicted RBP22.21■■□□□ 1.15
SSH3-209ENST00000532600 SMPD1P17405 629 aa22.21■■□□□ 1.15
SSH3-209ENST00000532600 IQCA1Q86XH1 822 aa22.21■■□□□ 1.15
SSH3-209ENST00000532600 FBXO16Q8IX29 292 aaPredicted RBP22.21■■□□□ 1.15
SSH3-209ENST00000532600 ASGR1P07306 291 aa22.2■■□□□ 1.14
SSH3-209ENST00000532600 TNFAIP2Q03169 654 aa22.2■■□□□ 1.14
SSH3-209ENST00000532600 SEC23AQ15436 765 aa22.2■■□□□ 1.14
SSH3-209ENST00000532600 GPATCH4Q5T3I0 446 aaKnown RBP22.2■■□□□ 1.14
SSH3-209ENST00000532600 EEPD1Q7L9B9 569 aa22.2■■□□□ 1.14
SSH3-209ENST00000532600 BADQ92934 168 aa22.2■■□□□ 1.14
SSH3-209ENST00000532600 LBHD1Q9BQE6 289 aaPredicted RBP22.2■■□□□ 1.14
SSH3-209ENST00000532600 KAT14Q9H8E8 782 aa22.2■■□□□ 1.14
SSH3-209ENST00000532600 STARD7Q9NQZ5 370 aa22.2■■□□□ 1.14
SSH3-209ENST00000532600 PRKAG2Q9UGJ0 569 aa22.2■■□□□ 1.14
SSH3-209ENST00000532600 WDR19Q8NEZ3 1342 aa22.2■■□□□ 1.14
SSH3-209ENST00000532600 PQBP1O60828 265 aaKnown RBP22.19■■□□□ 1.14
SSH3-209ENST00000532600 CYP21A2P08686 494 aa22.19■■□□□ 1.14
SSH3-209ENST00000532600 ALDH5A1P51649 535 aaPredicted RBP22.19■■□□□ 1.14
SSH3-209ENST00000532600 BEX3Q00994 111 aa22.19■■□□□ 1.14
SSH3-209ENST00000532600 CCDC178Q5BJE1 867 aa22.19■■□□□ 1.14
SSH3-209ENST00000532600 ANKRD33Q7Z3H0 272 aa22.19■■□□□ 1.14
SSH3-209ENST00000532600 KRT23Q9C075 422 aa22.19■■□□□ 1.14
SSH3-209ENST00000532600 PTPDC1A2A3K4 754 aa22.18■■□□□ 1.14
SSH3-209ENST00000532600 SGSM2O43147 1006 aa22.18■■□□□ 1.14
SSH3-209ENST00000532600 CLTBP09497 229 aa22.18■■□□□ 1.14
SSH3-209ENST00000532600 CDK7P50613 346 aa22.18■■□□□ 1.14
SSH3-209ENST00000532600 FAAP100Q0VG06 881 aa22.18■■□□□ 1.14
SSH3-209ENST00000532600 GNASQ5JWF2 1037 aa22.18■■□□□ 1.14
SSH3-209ENST00000532600 ADGRF4Q8IZF3 695 aa22.18■■□□□ 1.14
SSH3-209ENST00000532600 CNNM2Q9H8M5 875 aa22.18■■□□□ 1.14
SSH3-209ENST00000532600 ELP1O95163 1332 aa22.17■■□□□ 1.14
SSH3-209ENST00000532600 KIAA0355O15063 1070 aa22.17■■□□□ 1.14
SSH3-209ENST00000532600 CALML3P27482 149 aa22.17■■□□□ 1.14
SSH3-209ENST00000532600 RPS6P62753 249 aaKnown RBP22.17■■□□□ 1.14
SSH3-209ENST00000532600 CDC37Q16543 378 aaPredicted RBP22.17■■□□□ 1.14
SSH3-209ENST00000532600 C9orf50Q5SZB4 431 aa22.17■■□□□ 1.14
SSH3-209ENST00000532600 STOX1Q6ZVD7 989 aa22.17■■□□□ 1.14
SSH3-209ENST00000532600 TLK2Q86UE8 772 aa22.17■■□□□ 1.14
SSH3-209ENST00000532600 PCSK9Q8NBP7 692 aaKnown RBP22.17■■□□□ 1.14
SSH3-209ENST00000532600 NUP133Q8WUM0 1156 aa22.17■■□□□ 1.14
SSH3-209ENST00000532600 TBC1D5Q92609 795 aa22.17■■□□□ 1.14
SSH3-209ENST00000532600 EPHB4P54760 987 aa22.16■■□□□ 1.14
SSH3-209ENST00000532600 SHHQ15465 462 aa22.16■■□□□ 1.14
SSH3-209ENST00000532600 SLC35G1Q2M3R5 365 aa22.16■■□□□ 1.14
SSH3-209ENST00000532600 USH1GQ495M9 461 aa22.16■■□□□ 1.14
SSH3-209ENST00000532600 ASPRV1Q53RT3 343 aa22.16■■□□□ 1.14
SSH3-209ENST00000532600 RNF207Q6ZRF8 634 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms