RNA–Protein interactions for RNA: ENST00000531653.5

PSMC3-211, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 498 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-211	ENST00000531653	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
PSMC3-211	ENST00000531653	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.58	□□□□□ -0.24
PSMC3-211	ENST00000531653	KANSL2	Q9H9L4	492 aa		13.58	□□□□□ -0.24
PSMC3-211	ENST00000531653	ALG13	Q9NP73	1137 aa	Known RBP	13.58	□□□□□ -0.24
PSMC3-211	ENST00000531653	TRMT13	Q9NUP7	481 aa	Known RBP	13.58	□□□□□ -0.24
PSMC3-211	ENST00000531653	PRKAG3	Q9UGI9	489 aa		13.58	□□□□□ -0.24
PSMC3-211	ENST00000531653	DCHS1	Q96JQ0	3298 aa		13.58	□□□□□ -0.24
PSMC3-211	ENST00000531653	ZNF536	O15090	1300 aa		13.58	□□□□□ -0.24
PSMC3-211	ENST00000531653	TNKS	O95271	1327 aa		13.58	□□□□□ -0.24
PSMC3-211	ENST00000531653	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMC3-211	ENST00000531653	KMT2E	Q8IZD2	1858 aa		13.57	□□□□□ -0.24
PSMC3-211	ENST00000531653	MAGEB6P1	A0A0J9YX57	407 aa		13.57	□□□□□ -0.24
PSMC3-211	ENST00000531653	IQCF3	P0C7M6	154 aa		13.57	□□□□□ -0.24
PSMC3-211	ENST00000531653	CNTN2	Q02246	1040 aa		13.57	□□□□□ -0.24
PSMC3-211	ENST00000531653	TAPT1	Q6NXT6	567 aa		13.57	□□□□□ -0.24
PSMC3-211	ENST00000531653	BMP8A	Q7Z5Y6	402 aa		13.57	□□□□□ -0.24
PSMC3-211	ENST00000531653	TRMT2A	Q8IZ69	625 aa	Known RBP	13.57	□□□□□ -0.24
PSMC3-211	ENST00000531653	CHST13	Q8NET6	341 aa		13.57	□□□□□ -0.24
PSMC3-211	ENST00000531653	SDR42E1	Q8WUS8	393 aa		13.57	□□□□□ -0.24
PSMC3-211	ENST00000531653	MFSD14A	Q96MC6	490 aa		13.57	□□□□□ -0.24
PSMC3-211	ENST00000531653	SLC38A10	Q9HBR0	1119 aa		13.57	□□□□□ -0.24
PSMC3-211	ENST00000531653	GOPC	Q9HD26	462 aa		13.57	□□□□□ -0.24
PSMC3-211	ENST00000531653	FBXO40	Q9UH90	709 aa		13.57	□□□□□ -0.24
PSMC3-211	ENST00000531653	C5orf42	Q9H799	3197 aa		13.56	□□□□□ -0.24
PSMC3-211	ENST00000531653	TCRBV5S4A2T	A0A5A2	114 aa		13.56	□□□□□ -0.24
PSMC3-211	ENST00000531653	ZEB2	O60315	1214 aa		13.56	□□□□□ -0.24
PSMC3-211	ENST00000531653	GNAI2	P04899	355 aa		13.56	□□□□□ -0.24
PSMC3-211	ENST00000531653	CDK8	P49336	464 aa		13.56	□□□□□ -0.24
PSMC3-211	ENST00000531653	GPNMB	Q14956	572 aa		13.56	□□□□□ -0.24
PSMC3-211	ENST00000531653	TMEM63B	Q5T3F8	832 aa		13.56	□□□□□ -0.24
PSMC3-211	ENST00000531653	C16orf86	Q6ZW13	317 aa		13.56	□□□□□ -0.24
PSMC3-211	ENST00000531653	PRPF38A	Q8NAV1	312 aa	Known RBP	13.56	□□□□□ -0.24
PSMC3-211	ENST00000531653	SSH3	Q8TE77	659 aa		13.56	□□□□□ -0.24
PSMC3-211	ENST00000531653	ARHGAP45	Q92619	1136 aa		13.56	□□□□□ -0.24
PSMC3-211	ENST00000531653	EAF2	Q96CJ1	260 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMC3-211	ENST00000531653	RIF1	Q5UIP0	2472 aa	Known RBP	13.56	□□□□□ -0.24
PSMC3-211	ENST00000531653	LINC01553	A4QN01	128 aa		13.55	□□□□□ -0.24
PSMC3-211	ENST00000531653	SOWAHB	A6NEL2	793 aa		13.55	□□□□□ -0.24
PSMC3-211	ENST00000531653	DYNC1LI2	O43237	492 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMC3-211	ENST00000531653	CT47B1	P0C2W7	299 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMC3-211	ENST00000531653	OAZ1	P54368	228 aa		13.55	□□□□□ -0.24
PSMC3-211	ENST00000531653	PTPN5	P54829	565 aa		13.55	□□□□□ -0.24
PSMC3-211	ENST00000531653	WDR5	P61964	334 aa	Known RBP	13.55	□□□□□ -0.24
PSMC3-211	ENST00000531653	PURA	Q00577	322 aa	Known RBP	13.55	□□□□□ -0.24
PSMC3-211	ENST00000531653	TCF15	Q12870	199 aa		13.55	□□□□□ -0.24
PSMC3-211	ENST00000531653	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMC3-211	ENST00000531653	C12orf60	Q5U649	245 aa		13.55	□□□□□ -0.24
PSMC3-211	ENST00000531653	IQSEC1	Q6DN90	963 aa		13.55	□□□□□ -0.24
PSMC3-211	ENST00000531653	ANKRD35	Q8N283	1001 aa		13.55	□□□□□ -0.24
PSMC3-211	ENST00000531653	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
PSMC3-211	ENST00000531653	NUP88	Q99567	741 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMC3-211	ENST00000531653	AP5M1	Q9H0R1	490 aa		13.55	□□□□□ -0.24
PSMC3-211	ENST00000531653	NOP58	Q9Y2X3	529 aa	Known RBP	13.55	□□□□□ -0.24
PSMC3-211	ENST00000531653	MYO7A	Q13402	2215 aa		13.55	□□□□□ -0.24
PSMC3-211	ENST00000531653	PLXNA3	P51805	1871 aa		13.55	□□□□□ -0.24
PSMC3-211	ENST00000531653	FAM186A	A6NE01	2351 aa		13.54	□□□□□ -0.24
PSMC3-211	ENST00000531653	GJB5	O95377	273 aa		13.54	□□□□□ -0.24
PSMC3-211	ENST00000531653	PDE6A	P16499	860 aa		13.54	□□□□□ -0.24
PSMC3-211	ENST00000531653	IRS1	P35568	1242 aa		13.54	□□□□□ -0.24
PSMC3-211	ENST00000531653	ADHFE1	Q8IWW8	467 aa		13.54	□□□□□ -0.24
PSMC3-211	ENST00000531653	LCORL	Q8N3X6	602 aa		13.54	□□□□□ -0.24
PSMC3-211	ENST00000531653	MORC4	Q8TE76	937 aa		13.54	□□□□□ -0.24
PSMC3-211	ENST00000531653	TGS1	Q96RS0	853 aa	Known RBP	13.54	□□□□□ -0.24
PSMC3-211	ENST00000531653	RAVER2	Q9HCJ3	691 aa	Known RBP	13.54	□□□□□ -0.24
PSMC3-211	ENST00000531653	PDGFC	Q9NRA1	345 aa		13.54	□□□□□ -0.24
PSMC3-211	ENST00000531653	ATG2A	Q2TAZ0	1938 aa		13.54	□□□□□ -0.24
PSMC3-211	ENST00000531653	MYH4	Q9Y623	1939 aa		13.54	□□□□□ -0.24
PSMC3-211	ENST00000531653	DMD	P11532	3685 aa		13.54	□□□□□ -0.24
PSMC3-211	ENST00000531653	COL4A6	Q14031	1691 aa		13.53	□□□□□ -0.24
PSMC3-211	ENST00000531653	ASB14	A6NK59	587 aa		13.53	□□□□□ -0.24
PSMC3-211	ENST00000531653	NDUFB10	O96000	172 aa		13.53	□□□□□ -0.24
PSMC3-211	ENST00000531653	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.53	□□□□□ -0.24
PSMC3-211	ENST00000531653	CPXCR1	Q8N123	301 aa		13.53	□□□□□ -0.24
PSMC3-211	ENST00000531653	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.53	□□□□□ -0.24
PSMC3-211	ENST00000531653	ZBED9	Q6R2W3	1325 aa		13.53	□□□□□ -0.24
PSMC3-211	ENST00000531653		F5H6K3	240 aa		13.52	□□□□□ -0.25
PSMC3-211	ENST00000531653		H3BQ06	376 aa	Predicted RBP	13.52	□□□□□ -0.25
PSMC3-211	ENST00000531653	ZBED4	O75132	1171 aa		13.52	□□□□□ -0.25
PSMC3-211	ENST00000531653	DEFB103A	P81534	67 aa		13.52	□□□□□ -0.25
PSMC3-211	ENST00000531653	KLRC3	Q07444	240 aa		13.52	□□□□□ -0.25
PSMC3-211	ENST00000531653	DUSP28	Q4G0W2	176 aa		13.52	□□□□□ -0.25
PSMC3-211	ENST00000531653	IER5L	Q5T953	404 aa		13.52	□□□□□ -0.25
PSMC3-211	ENST00000531653	NOL8	Q76FK4	1167 aa	Known RBP	13.52	□□□□□ -0.25
PSMC3-211	ENST00000531653	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.52	□□□□□ -0.25
PSMC3-211	ENST00000531653	PABPC5	Q96DU9	382 aa	Known RBP	13.52	□□□□□ -0.25
PSMC3-211	ENST00000531653	CTAGE1	Q96RT6	745 aa		13.52	□□□□□ -0.25
PSMC3-211	ENST00000531653	RAD9A	Q99638	391 aa		13.52	□□□□□ -0.25
PSMC3-211	ENST00000531653	PRRX2	Q99811	253 aa		13.52	□□□□□ -0.25
PSMC3-211	ENST00000531653	A1CF	Q9NQ94	594 aa	Known RBP	13.52	□□□□□ -0.25
PSMC3-211	ENST00000531653	ATP8A2	Q9NTI2	1148 aa		13.52	□□□□□ -0.25
PSMC3-211	ENST00000531653	POLR3E	Q9NVU0	708 aa		13.52	□□□□□ -0.25
PSMC3-211	ENST00000531653	NYAP2	Q9P242	653 aa		13.52	□□□□□ -0.25
PSMC3-211	ENST00000531653	MICAL3	Q7RTP6	2002 aa		13.51	□□□□□ -0.25
PSMC3-211	ENST00000531653	ZNF532	Q9HCE3	1301 aa		13.51	□□□□□ -0.25
PSMC3-211	ENST00000531653	CYP2D7	A0A087X1C5	515 aa		13.51	□□□□□ -0.25
PSMC3-211	ENST00000531653	CXCL10	P02778	98 aa		13.51	□□□□□ -0.25
PSMC3-211	ENST00000531653	KCNJ6	P48051	423 aa		13.51	□□□□□ -0.25
PSMC3-211	ENST00000531653	PTPN11	Q06124	597 aa	Predicted RBP	13.51	□□□□□ -0.25
PSMC3-211	ENST00000531653	RBL2	Q08999	1139 aa		13.51	□□□□□ -0.25
PSMC3-211	ENST00000531653	SLC9C2	Q5TAH2	1124 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms