RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 ATP2A1O14983 1001 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 CTAGE5O15320 804 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 GTPBP6O43824 516 aaPredicted RBP11□□□□□ -0.65
NEDD8-206ENST00000531430 B4GALT4O60513 344 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 TTLL1O95922 423 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 MYL3P08590 195 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 CYP2C9P11712 490 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 SMPD1P17405 629 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 MCCP23508 829 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 TFAP4Q01664 338 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 SBK1Q52WX2 424 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 FAM47CQ5HY64 1035 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 TMEM63BQ5T3F8 832 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 IQSEC1Q6DN90 963 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 NSMFQ6X4W1 530 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 PPP1R13LQ8WUF5 828 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 CHURC1Q8WUH1 139 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 FGD4Q96M96 766 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 GPHNQ9NQX3 736 aaPredicted RBP11□□□□□ -0.65
NEDD8-206ENST00000531430 MTMR4Q9NYA4 1195 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 ROBO3Q96MS0 1386 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 ATP2A2P16615 1042 aaKnown RBP10.99□□□□□ -0.65
NEDD8-206ENST00000531430 SLC1A4P43007 532 aa10.99□□□□□ -0.65
NEDD8-206ENST00000531430 KCNQ1P51787 676 aa10.99□□□□□ -0.65
NEDD8-206ENST00000531430 OAZ1P54368 228 aa10.99□□□□□ -0.65
NEDD8-206ENST00000531430 AAK1Q2M2I8 961 aa10.99□□□□□ -0.65
NEDD8-206ENST00000531430 TMEM67Q5HYA8 995 aa10.99□□□□□ -0.65
NEDD8-206ENST00000531430 KCTD1Q719H9 257 aa10.99□□□□□ -0.65
NEDD8-206ENST00000531430 FBXO16Q8IX29 292 aaPredicted RBP10.99□□□□□ -0.65
NEDD8-206ENST00000531430 OSBP2Q969R2 916 aa10.99□□□□□ -0.65
NEDD8-206ENST00000531430 MKL1Q969V6 931 aa10.99□□□□□ -0.65
NEDD8-206ENST00000531430 PURBQ96QR8 312 aaKnown RBP10.99□□□□□ -0.65
NEDD8-206ENST00000531430 NOC4LQ9BVI4 516 aaKnown RBP10.99□□□□□ -0.65
NEDD8-206ENST00000531430 LRRCC1Q9C099 1032 aa10.99□□□□□ -0.65
NEDD8-206ENST00000531430 FTOQ9C0B1 505 aaKnown RBP eCLIP10.99□□□□□ -0.657e-7■■□□□ 13.4
NEDD8-206ENST00000531430 A1CFQ9NQ94 594 aaKnown RBP10.99□□□□□ -0.65
NEDD8-206ENST00000531430 DDX19BQ9UMR2 479 aa10.99□□□□□ -0.65
NEDD8-206ENST00000531430 PARP14Q460N5 1801 aa10.99□□□□□ -0.65
NEDD8-206ENST00000531430 ASTN1O14525 1302 aa10.99□□□□□ -0.65
NEDD8-206ENST00000531430 GRIN2DO15399 1336 aa10.99□□□□□ -0.65
NEDD8-206ENST00000531430 NCOR1O75376 2440 aa10.98□□□□□ -0.65
NEDD8-206ENST00000531430 PATL2C9JE40 543 aaKnown RBP10.98□□□□□ -0.65
NEDD8-206ENST00000531430 RNF113AO15541 343 aaKnown RBP10.98□□□□□ -0.65
NEDD8-206ENST00000531430 GPAA1O43292 621 aa10.98□□□□□ -0.65
NEDD8-206ENST00000531430 SLC3A2P08195 630 aaKnown RBP10.98□□□□□ -0.65
NEDD8-206ENST00000531430 FDX1P10109 184 aa10.98□□□□□ -0.65
NEDD8-206ENST00000531430 BMP1P13497 986 aa10.98□□□□□ -0.65
NEDD8-206ENST00000531430 STAT2P52630 851 aa10.98□□□□□ -0.65
NEDD8-206ENST00000531430 PDE4BQ07343 736 aa10.98□□□□□ -0.65
NEDD8-206ENST00000531430 TTLL4Q14679 1199 aa10.98□□□□□ -0.65
NEDD8-206ENST00000531430 TSHZ3Q63HK5 1081 aa10.98□□□□□ -0.65
NEDD8-206ENST00000531430 FAM133AQ8N9E0 248 aa10.98□□□□□ -0.65
NEDD8-206ENST00000531430 RETREG2Q8NC44 543 aa10.98□□□□□ -0.65
NEDD8-206ENST00000531430 STAG1Q8WVM7 1258 aa10.98□□□□□ -0.65
NEDD8-206ENST00000531430 ARNTL2Q8WYA1 636 aa10.98□□□□□ -0.65
NEDD8-206ENST00000531430 C1QTNF1Q9BXJ1 281 aa10.98□□□□□ -0.65
NEDD8-206ENST00000531430 KATNBL1Q9H079 304 aa10.98□□□□□ -0.65
NEDD8-206ENST00000531430 WNT8AQ9H1J5 351 aa10.98□□□□□ -0.65
NEDD8-206ENST00000531430 ECHDC1Q9NTX5 307 aa10.98□□□□□ -0.65
NEDD8-206ENST00000531430 TRMT13Q9NUP7 481 aaKnown RBP10.98□□□□□ -0.65
NEDD8-206ENST00000531430 STX8Q9UNK0 236 aa10.98□□□□□ -0.65
NEDD8-206ENST00000531430 GNEQ9Y223 722 aaKnown RBP10.98□□□□□ -0.65
NEDD8-206ENST00000531430 PCDHA11Q9Y5I1 949 aa10.98□□□□□ -0.65
NEDD8-206ENST00000531430 BDP1A6H8Y1 2624 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 IGKV6D-41A0A0C4DH26 115 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 M0R2C6 588 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 CA3P07451 260 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 SUPT20HL2P0C7V6 817 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 ACTN1P12814 892 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 GNAT2P19087 354 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 PLA2G5P39877 138 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 TKFCQ3LXA3 575 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 MUM1L1Q5H9M0 696 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 KRT40Q6A162 431 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 GIMAP6Q6P9H5 292 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 FAM160B2Q86V87 743 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 IFNL3Q8IZI9 196 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 SLC43A3Q8NBI5 491 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 GMCL1P1Q8NEA9 526 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 NEDD1Q8NHV4 660 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 APPBP2Q92624 585 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 GPATCH3Q96I76 525 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 NACAP1Q9BZK3 213 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 CHMP4BQ9H444 224 aaKnown RBP10.97□□□□□ -0.65
NEDD8-206ENST00000531430 EPHX3Q9H6B9 360 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 ZBTB40Q9NUA8 1239 aa10.97□□□□□ -0.65
NEDD8-206ENST00000531430 KIF28PB7ZC32 967 aa10.96□□□□□ -0.65
NEDD8-206ENST00000531430 CCDC96Q2M329 555 aa10.96□□□□□ -0.65
NEDD8-206ENST00000531430 RCSD1Q6JBY9 416 aa10.96□□□□□ -0.65
NEDD8-206ENST00000531430 TAPT1Q6NXT6 567 aa10.96□□□□□ -0.65
NEDD8-206ENST00000531430 KBTBD3Q8NAB2 608 aa10.96□□□□□ -0.65
NEDD8-206ENST00000531430 OR6J1Q8NGC5 347 aa10.96□□□□□ -0.65
NEDD8-206ENST00000531430 WDR11Q9BZH6 1224 aa10.96□□□□□ -0.65
NEDD8-206ENST00000531430 NAPBQ9H115 298 aa10.96□□□□□ -0.65
NEDD8-206ENST00000531430 ALDH8A1Q9H2A2 487 aaPredicted RBP10.96□□□□□ -0.65
NEDD8-206ENST00000531430 INCENPQ9NQS7 918 aa10.96□□□□□ -0.65
NEDD8-206ENST00000531430 CCPG1Q9ULG6 757 aa10.96□□□□□ -0.65
NEDD8-206ENST00000531430 PRR12Q9ULL5 1215 aa10.96□□□□□ -0.65
NEDD8-206ENST00000531430 NOD1Q9Y239 953 aa10.96□□□□□ -0.65
NEDD8-206ENST00000531430 MTCH2Q9Y6C9 303 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms