RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 KBTBD3Q8NAB2 608 aa10.99□□□□□ -0.65
CHMP4A-205ENST00000531158 DDRGK1Q96HY6 314 aa10.99□□□□□ -0.65
CHMP4A-205ENST00000531158 LRRCC1Q9C099 1032 aa10.99□□□□□ -0.65
CHMP4A-205ENST00000531158 WNT8AQ9H1J5 351 aa10.99□□□□□ -0.65
CHMP4A-205ENST00000531158 C11orf16Q9NQ32 467 aa10.99□□□□□ -0.65
CHMP4A-205ENST00000531158 A1CFQ9NQ94 594 aaKnown RBP10.99□□□□□ -0.65
CHMP4A-205ENST00000531158 HOMER2Q9NSB8 354 aa10.99□□□□□ -0.65
CHMP4A-205ENST00000531158 MTMR4Q9NYA4 1195 aa10.99□□□□□ -0.65
CHMP4A-205ENST00000531158 GNEQ9Y223 722 aaKnown RBP10.99□□□□□ -0.65
CHMP4A-205ENST00000531158 YBX2Q9Y2T7 364 aaKnown RBP10.99□□□□□ -0.65
CHMP4A-205ENST00000531158 MYH6P13533 1939 aa10.98□□□□□ -0.65
CHMP4A-205ENST00000531158 KIAA1217Q5T5P2 1943 aa10.98□□□□□ -0.65
CHMP4A-205ENST00000531158 FOXP2O15409 715 aa10.98□□□□□ -0.65
CHMP4A-205ENST00000531158 GPAA1O43292 621 aa10.98□□□□□ -0.65
CHMP4A-205ENST00000531158 KCNQ1P51787 676 aa10.98□□□□□ -0.65
CHMP4A-205ENST00000531158 PPIGQ13427 754 aaKnown RBP eCLIP10.98□□□□□ -0.65
CHMP4A-205ENST00000531158 AAK1Q2M2I8 961 aa10.98□□□□□ -0.65
CHMP4A-205ENST00000531158 ZSCAN25Q6NSZ9 544 aa10.98□□□□□ -0.65
CHMP4A-205ENST00000531158 GIMAP6Q6P9H5 292 aa10.98□□□□□ -0.65
CHMP4A-205ENST00000531158 PCSK9Q8NBP7 692 aaKnown RBP10.98□□□□□ -0.65
CHMP4A-205ENST00000531158 GMCL1P1Q8NEA9 526 aa10.98□□□□□ -0.65
CHMP4A-205ENST00000531158 APPBP2Q92624 585 aa10.98□□□□□ -0.65
CHMP4A-205ENST00000531158 AGBL1Q96MI9 1066 aa10.98□□□□□ -0.65
CHMP4A-205ENST00000531158 PURBQ96QR8 312 aaKnown RBP10.98□□□□□ -0.65
CHMP4A-205ENST00000531158 MKNK2Q9HBH9 465 aa10.98□□□□□ -0.65
CHMP4A-205ENST00000531158 PDGFCQ9NRA1 345 aa10.98□□□□□ -0.65
CHMP4A-205ENST00000531158 ECHDC1Q9NTX5 307 aa10.98□□□□□ -0.65
CHMP4A-205ENST00000531158 MROH7Q68CQ1 1323 aa10.98□□□□□ -0.65
CHMP4A-205ENST00000531158 RBAK-RBAKDNI3L0D1 243 aa10.97□□□□□ -0.65
CHMP4A-205ENST00000531158 RNF113AO15541 343 aaKnown RBP10.97□□□□□ -0.65
CHMP4A-205ENST00000531158 ZBED4O75132 1171 aa10.97□□□□□ -0.65
CHMP4A-205ENST00000531158 SMPD1P17405 629 aa10.97□□□□□ -0.65
CHMP4A-205ENST00000531158 OAZ1P54368 228 aa10.97□□□□□ -0.65
CHMP4A-205ENST00000531158 PSRC1Q6PGN9 363 aaPredicted RBP10.97□□□□□ -0.65
CHMP4A-205ENST00000531158 TMEM199Q8N511 208 aa10.97□□□□□ -0.65
CHMP4A-205ENST00000531158 CHST13Q8NET6 341 aa10.97□□□□□ -0.65
CHMP4A-205ENST00000531158 HERVK_113Q902F9 699 aa10.97□□□□□ -0.65
CHMP4A-205ENST00000531158 CHMP4CQ96CF2 233 aa10.97□□□□□ -0.65
CHMP4A-205ENST00000531158 SEC62Q99442 399 aaKnown RBP10.97□□□□□ -0.65
CHMP4A-205ENST00000531158 NKX2-4Q9H2Z4 354 aa10.97□□□□□ -0.65
CHMP4A-205ENST00000531158 IL23AQ9NPF7 189 aa10.97□□□□□ -0.65
CHMP4A-205ENST00000531158 FEM1BQ9UK73 627 aa10.97□□□□□ -0.65
CHMP4A-205ENST00000531158 TMEM232C9JQI7 657 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 TTLL1O95922 423 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 BMP3P12645 472 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 MYOGP15173 224 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 SNAP25P60880 206 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 PSMC6P62333 389 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 NHLH1Q02575 133 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 TNFAIP2Q03169 654 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 MUM1L1Q5H9M0 696 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 SLFN13Q68D06 897 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 TAPT1Q6NXT6 567 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 CCDC129Q6ZRS4 1044 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 OTOP2Q7RTS6 562 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 TLK2Q86UE8 772 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 IFNL3Q8IZI9 196 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 NEDD1Q8NHV4 660 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 KHSRPQ92945 711 aaKnown RBP eCLIP10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 NOC4LQ9BVI4 516 aaKnown RBP10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 TRPV6Q9H1D0 765 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 ACAD9Q9H845 621 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 INCENPQ9NQS7 918 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 RNF146Q9NTX7 359 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 FBXO40Q9UH90 709 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 SYNPO2Q9UMS6 1093 aa10.96□□□□□ -0.65
CHMP4A-205ENST00000531158 MYH7BA7E2Y1 1941 aa10.96□□□□□ -0.66
CHMP4A-205ENST00000531158 LAMA4Q16363 1823 aa10.95□□□□□ -0.66
CHMP4A-205ENST00000531158 B4GALT4O60513 344 aa10.95□□□□□ -0.66
CHMP4A-205ENST00000531158 NMT2O60551 498 aa10.95□□□□□ -0.66
CHMP4A-205ENST00000531158 MS4A1P11836 297 aa10.95□□□□□ -0.66
CHMP4A-205ENST00000531158 TDO2P48775 406 aa10.95□□□□□ -0.66
CHMP4A-205ENST00000531158 RABGGTBP53611 331 aa10.95□□□□□ -0.66
CHMP4A-205ENST00000531158 CCL23P55773 120 aa10.95□□□□□ -0.66
CHMP4A-205ENST00000531158 IRX6P78412 446 aaPredicted RBP10.95□□□□□ -0.66
CHMP4A-205ENST00000531158 ITGA7Q13683 1181 aa10.95□□□□□ -0.66
CHMP4A-205ENST00000531158 FSCN1Q16658 493 aaKnown RBP10.95□□□□□ -0.66
CHMP4A-205ENST00000531158 FBXO16Q8IX29 292 aaPredicted RBP10.95□□□□□ -0.66
CHMP4A-205ENST00000531158 MICALL1Q8N3F8 863 aa10.95□□□□□ -0.66
CHMP4A-205ENST00000531158 OTUD7AQ8TE49 926 aaPredicted RBP10.95□□□□□ -0.66
CHMP4A-205ENST00000531158 VTI1AQ96AJ9 217 aa10.95□□□□□ -0.66
CHMP4A-205ENST00000531158 GMCL1Q96IK5 515 aa10.95□□□□□ -0.66
CHMP4A-205ENST00000531158 HIPK3Q9H422 1215 aa10.95□□□□□ -0.66
CHMP4A-205ENST00000531158 IL17RBQ9NRM6 502 aa10.95□□□□□ -0.66
CHMP4A-205ENST00000531158 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.95□□□□□ -0.66
CHMP4A-205ENST00000531158 SIP14410 1827 aa10.94□□□□□ -0.66
CHMP4A-205ENST00000531158 MCCP23508 829 aa10.94□□□□□ -0.66
CHMP4A-205ENST00000531158 STAT2P52630 851 aa10.94□□□□□ -0.66
CHMP4A-205ENST00000531158 TFAP4Q01664 338 aa10.94□□□□□ -0.66
CHMP4A-205ENST00000531158 SKIV2LQ15477 1246 aaKnown RBP10.94□□□□□ -0.66
CHMP4A-205ENST00000531158 KCTD1Q719H9 257 aa10.94□□□□□ -0.66
CHMP4A-205ENST00000531158 EEPD1Q7L9B9 569 aa10.94□□□□□ -0.66
CHMP4A-205ENST00000531158 ZNF444Q8N0Y2 327 aaPredicted RBP10.94□□□□□ -0.66
CHMP4A-205ENST00000531158 PI4K2BQ8TCG2 481 aa10.94□□□□□ -0.66
CHMP4A-205ENST00000531158 SCLYQ96I15 445 aa10.94□□□□□ -0.66
CHMP4A-205ENST00000531158 TRERF1Q96PN7 1200 aa10.94□□□□□ -0.66
CHMP4A-205ENST00000531158 UIMC1Q96RL1 719 aa10.94□□□□□ -0.66
CHMP4A-205ENST00000531158 DCTPP1Q9H773 170 aa10.94□□□□□ -0.66
CHMP4A-205ENST00000531158 SPC25Q9HBM1 224 aa10.94□□□□□ -0.66
CHMP4A-205ENST00000531158 CYP39A1Q9NYL5 469 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms