RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 FERMT3Q86UX7 667 aa11.32□□□□□ -0.6
CTNND1-228ENST00000531007 ADGRF4Q8IZF3 695 aa11.32□□□□□ -0.6
CTNND1-228ENST00000531007 ZNF280CQ8ND82 737 aa11.32□□□□□ -0.6
CTNND1-228ENST00000531007 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.32□□□□□ -0.6
CTNND1-228ENST00000531007 FOXD4L4Q8WXT5 416 aaPredicted RBP11.32□□□□□ -0.6
CTNND1-228ENST00000531007 ZMYND12Q9H0C1 365 aa11.32□□□□□ -0.6
CTNND1-228ENST00000531007 JMJD4Q9H9V9 463 aa11.32□□□□□ -0.6
CTNND1-228ENST00000531007 C6orf50Q9HD87 102 aa11.32□□□□□ -0.6
CTNND1-228ENST00000531007 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.32□□□□□ -0.6
CTNND1-228ENST00000531007 FEM1BQ9UK73 627 aa11.32□□□□□ -0.6
CTNND1-228ENST00000531007 NOL7Q9UMY1 257 aaKnown RBP11.32□□□□□ -0.6
CTNND1-228ENST00000531007 PCDHA4Q9UN74 947 aa11.32□□□□□ -0.6
CTNND1-228ENST00000531007 CEP131Q9UPN4 1083 aa11.32□□□□□ -0.6
CTNND1-228ENST00000531007 CSADQ9Y600 493 aa11.32□□□□□ -0.6
CTNND1-228ENST00000531007 ATAD5Q96QE3 1844 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 USP2O75604 605 aaPredicted RBP11.31□□□□□ -0.6
CTNND1-228ENST00000531007 SLURP2P0DP57 97 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 BACE1P56817 501 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 UBE2HP62256 183 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 FKBP1BP68106 108 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 GUCY1B3Q02153 619 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 KLHL40Q2TBA0 621 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 SYDE2Q5VT97 1194 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 NUDT18Q6ZVK8 323 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 ARMC9Q7Z3E5 817 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 CLEC10AQ8IUN9 316 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 ANKRD13AQ8IZ07 590 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 BLIDQ8IZY5 108 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 JMYQ8N9B5 988 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 KCNG4Q8TDN1 519 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 SPATA32Q96LK8 384 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 C12orf42Q96LP6 360 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 AIFM3Q96NN9 605 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 FEZ1Q99689 392 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 GPCPD1Q9NPB8 672 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 RTEL1Q9NZ71 1219 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 VPS54Q9P1Q0 977 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 MTMR7Q9Y216 660 aa11.31□□□□□ -0.6
CTNND1-228ENST00000531007 FRMPD2Q68DX3 1309 aaPredicted RBP11.31□□□□□ -0.6
CTNND1-228ENST00000531007 SSC5DA1L4H1 1573 aa11.3□□□□□ -0.6
CTNND1-228ENST00000531007 POTECB2RU33 542 aa11.3□□□□□ -0.6
CTNND1-228ENST00000531007 TMEM232C9JQI7 657 aa11.3□□□□□ -0.6
CTNND1-228ENST00000531007 STXBP3O00186 592 aa11.3□□□□□ -0.6
CTNND1-228ENST00000531007 PRPF40AO75400 957 aaKnown RBP11.3□□□□□ -0.6
CTNND1-228ENST00000531007 PTPRAP18433 802 aa11.3□□□□□ -0.6
CTNND1-228ENST00000531007 NASPP49321 788 aaPredicted RBP11.3□□□□□ -0.6
CTNND1-228ENST00000531007 MRPL12P52815 198 aaKnown RBP11.3□□□□□ -0.6
CTNND1-228ENST00000531007 ORC2Q13416 577 aaPredicted RBP11.3□□□□□ -0.6
CTNND1-228ENST00000531007 WWC2Q6AWC2 1192 aa11.3□□□□□ -0.6
CTNND1-228ENST00000531007 NYAP1Q6ZVC0 841 aa11.3□□□□□ -0.6
CTNND1-228ENST00000531007 KCTD1Q719H9 257 aa11.3□□□□□ -0.6
CTNND1-228ENST00000531007 HEATR3Q7Z4Q2 680 aa11.3□□□□□ -0.6
CTNND1-228ENST00000531007 LDHDQ86WU2 507 aa11.3□□□□□ -0.6
CTNND1-228ENST00000531007 ACER1Q8TDN7 264 aa11.3□□□□□ -0.6
CTNND1-228ENST00000531007 CDCA5Q96FF9 252 aa11.3□□□□□ -0.6
CTNND1-228ENST00000531007 PIGSQ96S52 555 aa11.3□□□□□ -0.6
CTNND1-228ENST00000531007 AMNQ9BXJ7 453 aa11.3□□□□□ -0.6
CTNND1-228ENST00000531007 MAF1Q9H063 256 aa11.3□□□□□ -0.6
CTNND1-228ENST00000531007 LMBRD1Q9NUN5 540 aa11.3□□□□□ -0.6
CTNND1-228ENST00000531007 RCOR1Q9UKL0 485 aa11.3□□□□□ -0.6
CTNND1-228ENST00000531007 CNPY2Q9Y2B0 182 aa11.3□□□□□ -0.6
CTNND1-228ENST00000531007 BTBD18B2RXH4 712 aa11.29□□□□□ -0.6
CTNND1-228ENST00000531007 C3orf80F5H4A9 247 aa11.29□□□□□ -0.6
CTNND1-228ENST00000531007 RAD21O60216 631 aa11.29□□□□□ -0.6
CTNND1-228ENST00000531007 TRAK2O60296 914 aa11.29□□□□□ -0.6
CTNND1-228ENST00000531007 PPFIA3O75145 1194 aa11.29□□□□□ -0.6
CTNND1-228ENST00000531007 INPP5BP32019 993 aa11.29□□□□□ -0.6
CTNND1-228ENST00000531007 ECE1P42892 770 aa11.29□□□□□ -0.6
CTNND1-228ENST00000531007 NAPAP54920 295 aa11.29□□□□□ -0.6
CTNND1-228ENST00000531007 PPATQ06203 517 aa11.29□□□□□ -0.6
CTNND1-228ENST00000531007 IKQ13123 557 aaPredicted RBP11.29□□□□□ -0.6
CTNND1-228ENST00000531007 SHROOM1Q2M3G4 852 aaPredicted RBP11.29□□□□□ -0.6
CTNND1-228ENST00000531007 SLC35G1Q2M3R5 365 aa11.29□□□□□ -0.6
CTNND1-228ENST00000531007 EAPPQ56P03 285 aaPredicted RBP11.29□□□□□ -0.6
CTNND1-228ENST00000531007 SH3D19Q5HYK7 790 aa11.29□□□□□ -0.6
CTNND1-228ENST00000531007 OTUD7BQ6GQQ9 843 aa11.29□□□□□ -0.6
CTNND1-228ENST00000531007 KRT25Q7Z3Z0 450 aa11.29□□□□□ -0.6
CTNND1-228ENST00000531007 SAMD3Q8N6K7 520 aa11.29□□□□□ -0.6
CTNND1-228ENST00000531007 SYAP1Q96A49 352 aaPredicted RBP11.29□□□□□ -0.6
CTNND1-228ENST00000531007 UBA5Q9GZZ9 404 aa11.29□□□□□ -0.6
CTNND1-228ENST00000531007 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.29□□□□□ -0.6
CTNND1-228ENST00000531007 ISY1Q9ULR0 285 aaKnown RBP11.29□□□□□ -0.6
CTNND1-228ENST00000531007 KCNJ14Q9UNX9 436 aa11.29□□□□□ -0.6
CTNND1-228ENST00000531007 MYPNQ86TC9 1320 aa11.29□□□□□ -0.6
CTNND1-228ENST00000531007 MYH15Q9Y2K3 1946 aa11.29□□□□□ -0.6
CTNND1-228ENST00000531007 CCDC194A0A1B0GVG4 234 aa11.28□□□□□ -0.6
CTNND1-228ENST00000531007 GOLGA6L4A6NEF3 574 aa11.28□□□□□ -0.6
CTNND1-228ENST00000531007 SMCO2A6NFE2 343 aa11.28□□□□□ -0.6
CTNND1-228ENST00000531007 KIF28PB7ZC32 967 aa11.28□□□□□ -0.6
CTNND1-228ENST00000531007 ADM5C9JUS6 153 aa11.28□□□□□ -0.6
CTNND1-228ENST00000531007 CXCL11O14625 94 aa11.28□□□□□ -0.6
CTNND1-228ENST00000531007 FIBPO43427 364 aa11.28□□□□□ -0.6
CTNND1-228ENST00000531007 PPP6R2O75170 966 aa11.28□□□□□ -0.6
CTNND1-228ENST00000531007 ADCY7P51828 1080 aa11.28□□□□□ -0.6
CTNND1-228ENST00000531007 CDC37Q16543 378 aaPredicted RBP11.28□□□□□ -0.6
CTNND1-228ENST00000531007 FAM83BQ5T0W9 1011 aa11.28□□□□□ -0.6
CTNND1-228ENST00000531007 ANO1Q5XXA6 986 aa11.28□□□□□ -0.6
CTNND1-228ENST00000531007 TTBK2Q6IQ55 1244 aa11.28□□□□□ -0.6
CTNND1-228ENST00000531007 FBXO11Q86XK2 927 aa11.28□□□□□ -0.6
CTNND1-228ENST00000531007 HOMER1Q86YM7 354 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms