RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 RCSD1Q6JBY9 416 aa18.69■□□□□ 0.58
CHMP4A-204ENST00000530996 MFSD5Q6N075 450 aa18.69■□□□□ 0.58
CHMP4A-204ENST00000530996 CXCL17Q6UXB2 119 aa18.69■□□□□ 0.58
CHMP4A-204ENST00000530996 EVI5LQ96CN4 794 aa18.69■□□□□ 0.58
CHMP4A-204ENST00000530996 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.69■□□□□ 0.589e-7■■■□□ 14.9
CHMP4A-204ENST00000530996 KATNBL1Q9H079 304 aa18.69■□□□□ 0.58
CHMP4A-204ENST00000530996 SMCHD1A6NHR9 2005 aa18.68■□□□□ 0.58
CHMP4A-204ENST00000530996 FOXP2O15409 715 aa18.68■□□□□ 0.58
CHMP4A-204ENST00000530996 ZEB2O60315 1214 aa18.68■□□□□ 0.58
CHMP4A-204ENST00000530996 CSF2RAP15509 400 aa18.68■□□□□ 0.58
CHMP4A-204ENST00000530996 FSCN1Q16658 493 aaKnown RBP18.68■□□□□ 0.58
CHMP4A-204ENST00000530996 PSRC1Q6PGN9 363 aaPredicted RBP18.68■□□□□ 0.58
CHMP4A-204ENST00000530996 FAM126BQ8IXS8 530 aa18.68■□□□□ 0.58
CHMP4A-204ENST00000530996 DCAF4Q8WV16 495 aa18.68■□□□□ 0.58
CHMP4A-204ENST00000530996 TIFAQ96CG3 184 aa18.68■□□□□ 0.58
CHMP4A-204ENST00000530996 IL17RBQ9NRM6 502 aa18.68■□□□□ 0.58
CHMP4A-204ENST00000530996 CYP39A1Q9NYL5 469 aa18.68■□□□□ 0.58
CHMP4A-204ENST00000530996 FRMPD2Q68DX3 1309 aaPredicted RBP18.68■□□□□ 0.58
CHMP4A-204ENST00000530996 PLA2G6O60733 806 aa18.67■□□□□ 0.58
CHMP4A-204ENST00000530996 SLC16A2P36021 539 aa18.67■□□□□ 0.58
CHMP4A-204ENST00000530996 PTPDC1A2A3K4 754 aa18.66■□□□□ 0.58
CHMP4A-204ENST00000530996 DYNC1LI2O43237 492 aaPredicted RBP18.66■□□□□ 0.58
CHMP4A-204ENST00000530996 CABYRO75952 493 aa18.66■□□□□ 0.58
CHMP4A-204ENST00000530996 ICAM1P05362 532 aa18.66■□□□□ 0.58
CHMP4A-204ENST00000530996 ACRP10323 421 aa18.66■□□□□ 0.58
CHMP4A-204ENST00000530996 PTGS1P23219 599 aa18.66■□□□□ 0.58
CHMP4A-204ENST00000530996 CDK7P50613 346 aa18.66■□□□□ 0.58
CHMP4A-204ENST00000530996 SYDE2Q5VT97 1194 aa18.66■□□□□ 0.58
CHMP4A-204ENST00000530996 MTIF3Q9H2K0 278 aaKnown RBP18.66■□□□□ 0.58
CHMP4A-204ENST00000530996 HIPK3Q9H422 1215 aa18.66■□□□□ 0.58
CHMP4A-204ENST00000530996 HELLSQ9NRZ9 838 aa18.66■□□□□ 0.58
CHMP4A-204ENST00000530996 ASTN1O14525 1302 aa18.66■□□□□ 0.58
CHMP4A-204ENST00000530996 SALL3Q9BXA9 1300 aa18.66■□□□□ 0.58
CHMP4A-204ENST00000530996 LRRC37A2A6NM11 1700 aa18.66■□□□□ 0.58
CHMP4A-204ENST00000530996 EYSQ5T1H1 3165 aa18.65■□□□□ 0.58
CHMP4A-204ENST00000530996 A0A0D9SFI3 127 aa18.65■□□□□ 0.58
CHMP4A-204ENST00000530996 CTAGE5O15320 804 aa18.65■□□□□ 0.58
CHMP4A-204ENST00000530996 ORC4O43929 436 aa18.65■□□□□ 0.58
CHMP4A-204ENST00000530996 SMPD1P17405 629 aa18.65■□□□□ 0.58
CHMP4A-204ENST00000530996 CYP2C18P33260 490 aa18.65■□□□□ 0.58
CHMP4A-204ENST00000530996 ITGA7Q13683 1181 aa18.65■□□□□ 0.58
CHMP4A-204ENST00000530996 GRIN2CQ14957 1233 aa18.65■□□□□ 0.58
CHMP4A-204ENST00000530996 FAM227BQ96M60 508 aa18.65■□□□□ 0.58
CHMP4A-204ENST00000530996 CRBNQ96SW2 442 aa18.65■□□□□ 0.58
CHMP4A-204ENST00000530996 ZNF576Q9H609 170 aa18.65■□□□□ 0.58
CHMP4A-204ENST00000530996 VTA1Q9NP79 307 aa18.65■□□□□ 0.58
CHMP4A-204ENST00000530996 GPCPD1Q9NPB8 672 aa18.65■□□□□ 0.58
CHMP4A-204ENST00000530996 PDGFCQ9NRA1 345 aa18.65■□□□□ 0.58
CHMP4A-204ENST00000530996 ANAPC4Q9UJX5 808 aa18.65■□□□□ 0.58
CHMP4A-204ENST00000530996 GNEQ9Y223 722 aaKnown RBP18.65■□□□□ 0.58
CHMP4A-204ENST00000530996 TRIM6-TRIM34B2RNG4 842 aa18.64■□□□□ 0.57
CHMP4A-204ENST00000530996 HAND2P61296 217 aa18.64■□□□□ 0.57
CHMP4A-204ENST00000530996 TMEM240Q5SV17 173 aa18.64■□□□□ 0.57
CHMP4A-204ENST00000530996 TTBK2Q6IQ55 1244 aa18.64■□□□□ 0.57
CHMP4A-204ENST00000530996 KIAA1211Q6ZU35 1233 aa18.64■□□□□ 0.57
CHMP4A-204ENST00000530996 ZNF365Q70YC5 407 aa18.64■□□□□ 0.57
CHMP4A-204ENST00000530996 PURBQ96QR8 312 aaKnown RBP18.64■□□□□ 0.57
CHMP4A-204ENST00000530996 RANBP17Q9H2T7 1088 aaKnown RBP18.64■□□□□ 0.57
CHMP4A-204ENST00000530996 ADD3Q9UEY8 706 aaKnown RBP18.64■□□□□ 0.57
CHMP4A-204ENST00000530996 CDH23Q9H251 3354 aa18.64■□□□□ 0.57
CHMP4A-204ENST00000530996 MCM3APO60318 1980 aa18.63■□□□□ 0.57
CHMP4A-204ENST00000530996 GRXCR1A8MXD5 290 aa18.63■□□□□ 0.57
CHMP4A-204ENST00000530996 TOP1P11387 765 aaKnown RBP18.63■□□□□ 0.57
CHMP4A-204ENST00000530996 CALML3P27482 149 aa18.63■□□□□ 0.57
CHMP4A-204ENST00000530996 PDE1AP54750 535 aa18.63■□□□□ 0.57
CHMP4A-204ENST00000530996 PSMC6P62333 389 aa18.63■□□□□ 0.57
CHMP4A-204ENST00000530996 MCMDC2Q4G0Z9 681 aa18.63■□□□□ 0.57
CHMP4A-204ENST00000530996 GAS2L1Q99501 681 aaPredicted RBP18.63■□□□□ 0.57
CHMP4A-204ENST00000530996 NFIBO00712 420 aa18.62■□□□□ 0.57
CHMP4A-204ENST00000530996 PBX2P40425 430 aa18.62■□□□□ 0.57
CHMP4A-204ENST00000530996 ALDH5A1P51649 535 aaPredicted RBP18.62■□□□□ 0.57
CHMP4A-204ENST00000530996 CCL23P55773 120 aa18.62■□□□□ 0.57
CHMP4A-204ENST00000530996 NKX3-2P78367 333 aa18.62■□□□□ 0.57
CHMP4A-204ENST00000530996 NMIQ13287 307 aaPredicted RBP18.62■□□□□ 0.57
CHMP4A-204ENST00000530996 BAATQ14032 418 aaPredicted RBP18.62■□□□□ 0.57
CHMP4A-204ENST00000530996 IQSEC1Q6DN90 963 aa18.62■□□□□ 0.57
CHMP4A-204ENST00000530996 SLC30A10Q6XR72 485 aa18.62■□□□□ 0.57
CHMP4A-204ENST00000530996 RILPL2Q969X0 211 aa18.62■□□□□ 0.57
CHMP4A-204ENST00000530996 TMEM47Q9BQJ4 181 aa18.62■□□□□ 0.57
CHMP4A-204ENST00000530996 PBX4Q9BYU1 374 aa18.62■□□□□ 0.57
CHMP4A-204ENST00000530996 IL23AQ9NPF7 189 aa18.62■□□□□ 0.57
CHMP4A-204ENST00000530996 UMODL1Q5DID0 1318 aa18.62■□□□□ 0.57
CHMP4A-204ENST00000530996 CCDC171Q6TFL3 1326 aa18.61■□□□□ 0.57
CHMP4A-204ENST00000530996 CD4P01730 458 aa18.61■□□□□ 0.57
CHMP4A-204ENST00000530996 FGAP02671 866 aa18.61■□□□□ 0.57
CHMP4A-204ENST00000530996 ALX1Q15699 326 aa18.61■□□□□ 0.57
CHMP4A-204ENST00000530996 RAB30Q15771 203 aa18.61■□□□□ 0.57
CHMP4A-204ENST00000530996 TAPT1Q6NXT6 567 aa18.61■□□□□ 0.57
CHMP4A-204ENST00000530996 C16orf59Q7L2K0 433 aa18.61■□□□□ 0.57
CHMP4A-204ENST00000530996 ZNF589Q86UQ0 364 aaPredicted RBP18.61■□□□□ 0.57
CHMP4A-204ENST00000530996 PPM1EQ8WY54 764 aa18.61■□□□□ 0.57
CHMP4A-204ENST00000530996 MPHOSPH6Q99547 160 aaKnown RBP18.61■□□□□ 0.57
CHMP4A-204ENST00000530996 TRPV6Q9H1D0 765 aa18.61■□□□□ 0.57
CHMP4A-204ENST00000530996 MSRAQ9UJ68 235 aa18.61■□□□□ 0.57
CHMP4A-204ENST00000530996 ZMYM6O95789 1325 aa18.6■□□□□ 0.57
CHMP4A-204ENST00000530996 RAD50Q92878 1312 aa18.6■□□□□ 0.57
CHMP4A-204ENST00000530996 ZBBXA8MT70 800 aa18.6■□□□□ 0.57
CHMP4A-204ENST00000530996 B4GALT4O60513 344 aa18.6■□□□□ 0.57
CHMP4A-204ENST00000530996 FGBP02675 491 aa18.6■□□□□ 0.57
CHMP4A-204ENST00000530996 MYL3P08590 195 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms