RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 DDX11Q96FC9 970 aa13.82□□□□□ -0.2
LTBP3-219ENST00000530990 FGD4Q96M96 766 aa13.82□□□□□ -0.2
LTBP3-219ENST00000530990 MAP3K14Q99558 947 aa13.82□□□□□ -0.2
LTBP3-219ENST00000530990 RNF208Q9H0X6 261 aa13.82□□□□□ -0.2
LTBP3-219ENST00000530990 SLC5A4Q9NY91 659 aa13.82□□□□□ -0.2
LTBP3-219ENST00000530990 BRPF3Q9ULD4 1205 aa13.82□□□□□ -0.2
LTBP3-219ENST00000530990 KLF18A0A0U1RQI7 1052 aa13.81□□□□□ -0.2
LTBP3-219ENST00000530990 PLEKHA8P1O95397 391 aa13.81□□□□□ -0.2
LTBP3-219ENST00000530990 KIF5BP33176 963 aa13.81□□□□□ -0.2
LTBP3-219ENST00000530990 CYP2C19P33261 490 aa13.81□□□□□ -0.2
LTBP3-219ENST00000530990 NSMFQ6X4W1 530 aa13.81□□□□□ -0.2
LTBP3-219ENST00000530990 HOMER1Q86YM7 354 aa13.81□□□□□ -0.2
LTBP3-219ENST00000530990 CLEC4DQ8WXI8 215 aa13.81□□□□□ -0.2
LTBP3-219ENST00000530990 BRF1Q92994 677 aa13.81□□□□□ -0.2
LTBP3-219ENST00000530990 MTMR8Q96EF0 704 aa13.81□□□□□ -0.2
LTBP3-219ENST00000530990 TMEM106CQ9BVX2 250 aa13.81□□□□□ -0.2
LTBP3-219ENST00000530990 UPF3BQ9BZI7 483 aaKnown RBP13.81□□□□□ -0.2
LTBP3-219ENST00000530990 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.81□□□□□ -0.2
LTBP3-219ENST00000530990 RIOX1Q9H6W3 641 aa13.81□□□□□ -0.2
LTBP3-219ENST00000530990 PFASO15067 1338 aa13.81□□□□□ -0.2
LTBP3-219ENST00000530990 ZBTB5O15062 677 aa13.8□□□□□ -0.2
LTBP3-219ENST00000530990 PPP1R11O60927 126 aaPredicted RBP13.8□□□□□ -0.2
LTBP3-219ENST00000530990 CCND3P30281 292 aaPredicted RBP13.8□□□□□ -0.2
LTBP3-219ENST00000530990 FGD1P98174 961 aa13.8□□□□□ -0.2
LTBP3-219ENST00000530990 CNTN2Q02246 1040 aa13.8□□□□□ -0.2
LTBP3-219ENST00000530990 APOBRQ0VD83 1088 aa13.8□□□□□ -0.2
LTBP3-219ENST00000530990 MFSD14CQ5VZR4 134 aa13.8□□□□□ -0.2
LTBP3-219ENST00000530990 SLC30A10Q6XR72 485 aa13.8□□□□□ -0.2
LTBP3-219ENST00000530990 RUFY3Q7L099 469 aa13.8□□□□□ -0.2
LTBP3-219ENST00000530990 CMTR1Q8N1G2 835 aaKnown RBP13.8□□□□□ -0.2
LTBP3-219ENST00000530990 SHISA4Q96DD7 197 aa13.8□□□□□ -0.2
LTBP3-219ENST00000530990 PIGSQ96S52 555 aa13.8□□□□□ -0.2
LTBP3-219ENST00000530990 SPZ1Q9BXG8 430 aa13.8□□□□□ -0.2
LTBP3-219ENST00000530990 AGXT2Q9BYV1 514 aa13.8□□□□□ -0.2
LTBP3-219ENST00000530990 ZSWIM6Q9HCJ5 1215 aa13.8□□□□□ -0.2
LTBP3-219ENST00000530990 PAK6Q9NQU5 681 aaPredicted RBP13.8□□□□□ -0.2
LTBP3-219ENST00000530990 CYP39A1Q9NYL5 469 aa13.8□□□□□ -0.2
LTBP3-219ENST00000530990 PNMA2Q9UL42 364 aa13.8□□□□□ -0.2
LTBP3-219ENST00000530990 DIS3Q9Y2L1 958 aaKnown RBP13.8□□□□□ -0.2
LTBP3-219ENST00000530990 ABCB11O95342 1321 aa13.8□□□□□ -0.2
LTBP3-219ENST00000530990 RPTORQ8N122 1335 aa13.8□□□□□ -0.2
LTBP3-219ENST00000530990 POTEB2H3BUK9 544 aa13.79□□□□□ -0.2
LTBP3-219ENST00000530990 ZBTB43O43298 467 aa13.79□□□□□ -0.2
LTBP3-219ENST00000530990 EIF5BO60841 1220 aaKnown RBP13.79□□□□□ -0.2
LTBP3-219ENST00000530990 GJB1P08034 283 aa13.79□□□□□ -0.2
LTBP3-219ENST00000530990 CYBAP13498 195 aa13.79□□□□□ -0.2
LTBP3-219ENST00000530990 SYNE3Q6ZMZ3 975 aa13.79□□□□□ -0.2
LTBP3-219ENST00000530990 FBXO11Q86XK2 927 aa13.79□□□□□ -0.2
LTBP3-219ENST00000530990 SRBD1Q8N5C6 995 aaKnown RBP13.79□□□□□ -0.2
LTBP3-219ENST00000530990 FAM133AQ8N9E0 248 aa13.79□□□□□ -0.2
LTBP3-219ENST00000530990 FANCBQ8NB91 859 aa13.79□□□□□ -0.2
LTBP3-219ENST00000530990 TRPV1Q8NER1 839 aa13.79□□□□□ -0.2
LTBP3-219ENST00000530990 PIBF1Q8WXW3 757 aa13.79□□□□□ -0.2
LTBP3-219ENST00000530990 AMNQ9BXJ7 453 aa13.79□□□□□ -0.2
LTBP3-219ENST00000530990 TM6SF1Q9BZW5 370 aa13.79□□□□□ -0.2
LTBP3-219ENST00000530990 HMX1Q9NP08 348 aaPredicted RBP13.79□□□□□ -0.2
LTBP3-219ENST00000530990 CYP46A1Q9Y6A2 500 aa13.79□□□□□ -0.2
LTBP3-219ENST00000530990 ASTN1O14525 1302 aa13.79□□□□□ -0.2
LTBP3-219ENST00000530990 PTPDC1A2A3K4 754 aa13.78□□□□□ -0.2
LTBP3-219ENST00000530990 GOLGA8AA7E2F4 631 aa13.78□□□□□ -0.2
LTBP3-219ENST00000530990 GOLGA8BA8MQT2 603 aa13.78□□□□□ -0.2
LTBP3-219ENST00000530990 EN2P19622 333 aaPredicted RBP13.78□□□□□ -0.2
LTBP3-219ENST00000530990 GJA8P48165 433 aa13.78□□□□□ -0.2
LTBP3-219ENST00000530990 GNAQP50148 359 aa13.78□□□□□ -0.2
LTBP3-219ENST00000530990 ANAPC15P60006 121 aa13.78□□□□□ -0.2
LTBP3-219ENST00000530990 BAATQ14032 418 aaPredicted RBP13.78□□□□□ -0.2
LTBP3-219ENST00000530990 TOB2Q14106 344 aaPredicted RBP13.78□□□□□ -0.2
LTBP3-219ENST00000530990 RTN1Q16799 776 aa13.78□□□□□ -0.2
LTBP3-219ENST00000530990 TMTC3Q6ZXV5 915 aa13.78□□□□□ -0.2
LTBP3-219ENST00000530990 ZNF467Q7Z7K2 595 aaPredicted RBP13.78□□□□□ -0.2
LTBP3-219ENST00000530990 FBXL16Q8N461 479 aa13.78□□□□□ -0.2
LTBP3-219ENST00000530990 U2AF1L4Q8WU68 220 aaKnown RBP13.78□□□□□ -0.2
LTBP3-219ENST00000530990 DEFB118Q96PH6 123 aa13.78□□□□□ -0.2
LTBP3-219ENST00000530990 PURBQ96QR8 312 aaKnown RBP13.78□□□□□ -0.2
LTBP3-219ENST00000530990 TINF2Q9BSI4 451 aa13.78□□□□□ -0.2
LTBP3-219ENST00000530990 NAP1L2Q9ULW6 460 aaPredicted RBP13.78□□□□□ -0.2
LTBP3-219ENST00000530990 CNTNAP5Q8WYK1 1306 aa13.78□□□□□ -0.2
LTBP3-219ENST00000530990 NID2Q14112 1375 aa13.78□□□□□ -0.2
LTBP3-219ENST00000530990 SOWAHBA6NEL2 793 aa13.77□□□□□ -0.21
LTBP3-219ENST00000530990 OPLAHO14841 1288 aa13.77□□□□□ -0.21
LTBP3-219ENST00000530990 CALML3P27482 149 aa13.77□□□□□ -0.21
LTBP3-219ENST00000530990 SMARCA1P28370 1054 aa13.77□□□□□ -0.21
LTBP3-219ENST00000530990 RCAN1P53805 252 aa13.77□□□□□ -0.21
LTBP3-219ENST00000530990 RPS6P62753 249 aaKnown RBP13.77□□□□□ -0.21
LTBP3-219ENST00000530990 PRAMEF19Q5SWL8 479 aa13.77□□□□□ -0.21
LTBP3-219ENST00000530990 MAMDC4Q6UXC1 1216 aa13.77□□□□□ -0.21
LTBP3-219ENST00000530990 RNF207Q6ZRF8 634 aa13.77□□□□□ -0.21
LTBP3-219ENST00000530990 ARMCX2Q7L311 632 aa13.77□□□□□ -0.21
LTBP3-219ENST00000530990 IL17RAQ96F46 866 aa13.77□□□□□ -0.21
LTBP3-219ENST00000530990 SYNGAP1Q96PV0 1343 aa13.77□□□□□ -0.21
LTBP3-219ENST00000530990 LZTS2Q9BRK4 669 aa13.77□□□□□ -0.21
LTBP3-219ENST00000530990 RBM28Q9NW13 759 aaKnown RBP13.77□□□□□ -0.21
LTBP3-219ENST00000530990 PCDHA1Q9Y5I3 950 aa13.77□□□□□ -0.21
LTBP3-219ENST00000530990 DDX49Q9Y6V7 483 aaKnown RBP13.77□□□□□ -0.21
LTBP3-219ENST00000530990 PNMA6FA0A0J9YX94 578 aa13.76□□□□□ -0.21
LTBP3-219ENST00000530990 SGPL1O95470 568 aa13.76□□□□□ -0.21
LTBP3-219ENST00000530990 CNGA1P29973 690 aa13.76□□□□□ -0.21
LTBP3-219ENST00000530990 CDC27P30260 824 aa13.76□□□□□ -0.21
LTBP3-219ENST00000530990 METAP2P50579 478 aaKnown RBP eCLIP13.76□□□□□ -0.21
LTBP3-219ENST00000530990 CCDC82Q8N4S0 544 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms