RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 ABCF2Q9UG63 623 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 AFF2P51816 1311 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 ROBO3Q96MS0 1386 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 LRRC37AA6NMS7 1700 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 ECM29Q5VYK3 1845 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 FAM237AA0A1B0GTK4 181 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 NPHP1O15259 732 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 SPTLC2O15270 562 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 MYO1BO43795 1136 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 BBOX1O75936 387 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 BAG3O95817 575 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 INHAP05111 366 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 PTMAP06454 111 aaKnown RBP6.41□□□□□ -1.38
PCF11-205ENST00000530906 ATP2B4P23634 1241 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 CMA1P23946 247 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 TM4SF1P30408 202 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 HOXA10P31260 410 aaPredicted RBP6.41□□□□□ -1.38
PCF11-205ENST00000530906 BAG6P46379 1132 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 GYG1P46976 350 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 PLA2G4AP47712 749 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 GDF10P55107 478 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 PDE4BQ07343 736 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 GNL2Q13823 731 aaKnown RBP6.41□□□□□ -1.38
PCF11-205ENST00000530906 SLC39A14Q15043 492 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 ZRSR1Q15695 479 aaKnown RBP6.41□□□□□ -1.38
PCF11-205ENST00000530906 RTN1Q16799 776 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 OXLD1Q5BKU9 147 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 RILPL1Q5EBL4 403 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 ANO1Q5XXA6 986 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 KRT40Q6A162 431 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.41□□□□□ -1.38
PCF11-205ENST00000530906 CHST3Q7LGC8 479 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 MICU3Q86XE3 530 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 CCAR1Q8IX12 1150 aaKnown RBP6.41□□□□□ -1.38
PCF11-205ENST00000530906 AMOTL1Q8IY63 956 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 ZNF654Q8IZM8 581 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 RNF214Q8ND24 703 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 ENGASEQ8NFI3 743 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 TDRD7Q8NHU6 1098 aaKnown RBP6.41□□□□□ -1.38
PCF11-205ENST00000530906 TBC1D22AQ8WUA7 517 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 NSUN4Q96CB9 384 aaKnown RBP6.41□□□□□ -1.38
PCF11-205ENST00000530906 CCDC34Q96HJ3 373 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 RBM17Q96I25 401 aaKnown RBP6.41□□□□□ -1.38
PCF11-205ENST00000530906 BTBD6Q96KE9 485 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 BPIFA3Q9BQP9 254 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 ZCCHC2Q9C0B9 1178 aaKnown RBP6.41□□□□□ -1.38
PCF11-205ENST00000530906 RRAGDQ9NQL2 400 aaPredicted RBP6.41□□□□□ -1.38
PCF11-205ENST00000530906 ANO10Q9NW15 660 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 HOOK1Q9UJC3 728 aaKnown RBP6.41□□□□□ -1.38
PCF11-205ENST00000530906 CEP131Q9UPN4 1083 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 TNRC6CQ9HCJ0 1690 aaKnown RBP6.41□□□□□ -1.38
PCF11-205ENST00000530906 IRS2Q9Y4H2 1338 aa6.41□□□□□ -1.38
PCF11-205ENST00000530906 COL4A1P02462 1669 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 RGPD3A6NKT7 1758 aaPredicted RBP6.4□□□□□ -1.38
PCF11-205ENST00000530906 RGPD4Q7Z3J3 1758 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 KLRG2A4D1S0 409 aaPredicted RBP6.4□□□□□ -1.38
PCF11-205ENST00000530906 CUTAO60888 179 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 MMP1P03956 469 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 ARAFP10398 606 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 CDC25BP30305 580 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 RBM6P78332 1123 aaKnown RBP6.4□□□□□ -1.38
PCF11-205ENST00000530906 AKAP17AQ02040 695 aaKnown RBP6.4□□□□□ -1.38
PCF11-205ENST00000530906 MECOMQ03112 1051 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 VAC14Q08AM6 782 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 KIAA2012Q0VF49 1180 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 SNW1Q13573 536 aaKnown RBP6.4□□□□□ -1.38
PCF11-205ENST00000530906 NFIXQ14938 502 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 SEC23AQ15436 765 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 FAM173BQ6P4H8 233 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 FIGNL1Q6PIW4 674 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 SARM1Q6SZW1 724 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 BICDL1Q6ZP65 573 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 CATIPQ7Z7H3 387 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 NLRP8Q86W28 1048 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 DZIP1Q86YF9 867 aaKnown RBP6.4□□□□□ -1.38
PCF11-205ENST00000530906 NOSTRINQ8IVI9 506 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 CEP57L1Q8IYX8 460 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 FMR1NBQ8N0W7 255 aaPredicted RBP6.4□□□□□ -1.38
PCF11-205ENST00000530906 FSIP1Q8NA03 581 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 FANCBQ8NB91 859 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 FLAD1Q8NFF5 587 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 C1orf216Q8TAB5 229 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 RPGRQ92834 1020 aaKnown RBP6.4□□□□□ -1.38
PCF11-205ENST00000530906 CRAMP1Q96RY5 1269 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 BRMS1Q9HCU9 246 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 TOMM22Q9NS69 142 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 PODXL2Q9NZ53 605 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 SRP68Q9UHB9 627 aaKnown RBP6.4□□□□□ -1.38
PCF11-205ENST00000530906 PCDHA7Q9UN72 937 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.4□□□□□ -1.38
PCF11-205ENST00000530906 SUGT1Q9Y2Z0 365 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 PCDHGC4Q9Y5F7 938 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 MRVI1Q9Y6F6 885 aa6.4□□□□□ -1.38
PCF11-205ENST00000530906 TAF1P21675 1872 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 MYH6P13533 1939 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 GOLGA6L19H0YKK7 550 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 SNAP23O00161 211 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 PRPF3O43395 683 aaKnown RBP6.39□□□□□ -1.39
PCF11-205ENST00000530906 PRKAB2O43741 272 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 NEMFO60524 1076 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms