RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 MAF1Q9H063 256 aa21.51■■□□□ 1.03
PSMC3-208ENST00000530887 PRR12Q9ULL5 1215 aa21.51■■□□□ 1.03
PSMC3-208ENST00000530887 GNEQ9Y223 722 aaKnown RBP21.51■■□□□ 1.03
PSMC3-208ENST00000530887 ZMYM6O95789 1325 aa21.51■■□□□ 1.03
PSMC3-208ENST00000530887 B4DLN1 442 aa21.5■■□□□ 1.03
PSMC3-208ENST00000530887 RANBP6O60518 1105 aaKnown RBP21.5■■□□□ 1.03
PSMC3-208ENST00000530887 FGRP09769 529 aa21.5■■□□□ 1.03
PSMC3-208ENST00000530887 MRPL12P52815 198 aaKnown RBP21.5■■□□□ 1.03
PSMC3-208ENST00000530887 EPHB4P54760 987 aa21.5■■□□□ 1.03
PSMC3-208ENST00000530887 CNTN2Q02246 1040 aa21.5■■□□□ 1.03
PSMC3-208ENST00000530887 FSCN1Q16658 493 aaKnown RBP21.5■■□□□ 1.03
PSMC3-208ENST00000530887 SLC43A3Q8NBI5 491 aa21.5■■□□□ 1.03
PSMC3-208ENST00000530887 MYLIPQ8WY64 445 aa21.5■■□□□ 1.03
PSMC3-208ENST00000530887 TIFAQ96CG3 184 aa21.5■■□□□ 1.03
PSMC3-208ENST00000530887 AGBL1Q96MI9 1066 aa21.5■■□□□ 1.03
PSMC3-208ENST00000530887 TCP11L1Q9NUJ3 509 aa21.5■■□□□ 1.03
PSMC3-208ENST00000530887 CYP39A1Q9NYL5 469 aa21.5■■□□□ 1.03
PSMC3-208ENST00000530887 CCPG1Q9ULG6 757 aa21.5■■□□□ 1.03
PSMC3-208ENST00000530887 CD4P01730 458 aa21.49■■□□□ 1.03
PSMC3-208ENST00000530887 MFAP1P55081 439 aaKnown RBP21.49■■□□□ 1.03
PSMC3-208ENST00000530887 RAB30Q15771 203 aa21.49■■□□□ 1.03
PSMC3-208ENST00000530887 BRDTQ58F21 947 aaPredicted RBP21.49■■□□□ 1.03
PSMC3-208ENST00000530887 BTNL9Q6UXG8 535 aa21.49■■□□□ 1.03
PSMC3-208ENST00000530887 MORC4Q8TE76 937 aa21.49■■□□□ 1.03
PSMC3-208ENST00000530887 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.49■■□□□ 1.031e-10■□□□□ 10.4
PSMC3-208ENST00000530887 PCDHB15Q9Y5E8 787 aa21.49■■□□□ 1.03
PSMC3-208ENST00000530887 SOWAHBA6NEL2 793 aa21.48■■□□□ 1.03
PSMC3-208ENST00000530887 TOP1P11387 765 aaKnown RBP21.48■■□□□ 1.03
PSMC3-208ENST00000530887 CCDC96Q2M329 555 aa21.48■■□□□ 1.03
PSMC3-208ENST00000530887 TMEM240Q5SV17 173 aa21.48■■□□□ 1.03
PSMC3-208ENST00000530887 RASIP1Q5U651 963 aa21.48■■□□□ 1.03
PSMC3-208ENST00000530887 KCTD1Q719H9 257 aa21.48■■□□□ 1.03
PSMC3-208ENST00000530887 TTC14Q96N46 770 aa21.48■■□□□ 1.03
PSMC3-208ENST00000530887 GAS2L1Q99501 681 aaPredicted RBP21.48■■□□□ 1.03
PSMC3-208ENST00000530887 RANBP17Q9H2T7 1088 aaKnown RBP21.48■■□□□ 1.03
PSMC3-208ENST00000530887 ZNF576Q9H609 170 aa21.48■■□□□ 1.03
PSMC3-208ENST00000530887 IL23AQ9NPF7 189 aa21.48■■□□□ 1.03
PSMC3-208ENST00000530887 IL17RBQ9NRM6 502 aa21.48■■□□□ 1.03
PSMC3-208ENST00000530887 UNC80Q8N2C7 3258 aa21.48■■□□□ 1.03
PSMC3-208ENST00000530887 SALL3Q9BXA9 1300 aa21.48■■□□□ 1.03
PSMC3-208ENST00000530887 CTAGE5O15320 804 aa21.47■■□□□ 1.03
PSMC3-208ENST00000530887 ADCY6O43306 1168 aa21.47■■□□□ 1.03
PSMC3-208ENST00000530887 SUPT20HL2P0C7V6 817 aa21.47■■□□□ 1.03
PSMC3-208ENST00000530887 ITGA7Q13683 1181 aa21.47■■□□□ 1.03
PSMC3-208ENST00000530887 MCMDC2Q4G0Z9 681 aa21.47■■□□□ 1.03
PSMC3-208ENST00000530887 RPUSD2Q8IZ73 545 aaKnown RBP21.47■■□□□ 1.03
PSMC3-208ENST00000530887 POLR3EQ9NVU0 708 aa21.47■■□□□ 1.03
PSMC3-208ENST00000530887 MSRAQ9UJ68 235 aa21.47■■□□□ 1.03
PSMC3-208ENST00000530887 RAD50Q92878 1312 aa21.47■■□□□ 1.03
PSMC3-208ENST00000530887 NKRFO15226 690 aaKnown RBP eCLIP21.46■■□□□ 1.03
PSMC3-208ENST00000530887 PFKMP08237 780 aa21.46■■□□□ 1.03
PSMC3-208ENST00000530887 CSF2RAP15509 400 aa21.46■■□□□ 1.03
PSMC3-208ENST00000530887 CTDSPL2Q05D32 466 aa21.46■■□□□ 1.03
PSMC3-208ENST00000530887 CCDC178Q5BJE1 867 aa21.46■■□□□ 1.03
PSMC3-208ENST00000530887 ANKRD45Q5TZF3 282 aa21.46■■□□□ 1.03
PSMC3-208ENST00000530887 NSMFQ6X4W1 530 aa21.46■■□□□ 1.03
PSMC3-208ENST00000530887 HERVK_113Q902F9 699 aa21.46■■□□□ 1.03
PSMC3-208ENST00000530887 HIPK3Q9H422 1215 aa21.46■■□□□ 1.03
PSMC3-208ENST00000530887 RNF41Q9H4P4 317 aaPredicted RBP21.46■■□□□ 1.03
PSMC3-208ENST00000530887 TOMM22Q9NS69 142 aa21.46■■□□□ 1.03
PSMC3-208ENST00000530887 DYNC1LI2O43237 492 aaPredicted RBP21.45■■□□□ 1.02
PSMC3-208ENST00000530887 CPT1AP50416 773 aa21.45■■□□□ 1.02
PSMC3-208ENST00000530887 HDAC1Q13547 482 aaPredicted RBP21.45■■□□□ 1.02
PSMC3-208ENST00000530887 DUSP28Q4G0W2 176 aa21.45■■□□□ 1.02
PSMC3-208ENST00000530887 SYDE2Q5VT97 1194 aa21.45■■□□□ 1.02
PSMC3-208ENST00000530887 CXCL17Q6UXB2 119 aa21.45■■□□□ 1.02
PSMC3-208ENST00000530887 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.44■■□□□ 1.02
PSMC3-208ENST00000530887 KPNA6O60684 536 aa21.44■■□□□ 1.02
PSMC3-208ENST00000530887 FGBP02675 491 aa21.44■■□□□ 1.02
PSMC3-208ENST00000530887 SMPD1P17405 629 aa21.44■■□□□ 1.02
PSMC3-208ENST00000530887 PDE1AP54750 535 aa21.44■■□□□ 1.02
PSMC3-208ENST00000530887 BEX3Q00994 111 aa21.44■■□□□ 1.02
PSMC3-208ENST00000530887 TAPT1Q6NXT6 567 aa21.44■■□□□ 1.02
PSMC3-208ENST00000530887 KIAA1211Q6ZU35 1233 aa21.44■■□□□ 1.02
PSMC3-208ENST00000530887 ZNF365Q70YC5 407 aa21.44■■□□□ 1.02
PSMC3-208ENST00000530887 DNERQ8NFT8 737 aa21.44■■□□□ 1.02
PSMC3-208ENST00000530887 OTUD7AQ8TE49 926 aaPredicted RBP21.44■■□□□ 1.02
PSMC3-208ENST00000530887 PPP1R12CQ9BZL4 782 aa21.44■■□□□ 1.02
PSMC3-208ENST00000530887 WDR19Q8NEZ3 1342 aa21.44■■□□□ 1.02
PSMC3-208ENST00000530887 FOXP2O15409 715 aa21.43■■□□□ 1.02
PSMC3-208ENST00000530887 MUM1L1Q5H9M0 696 aa21.43■■□□□ 1.02
PSMC3-208ENST00000530887 AKNAD1Q5T1N1 836 aa21.43■■□□□ 1.02
PSMC3-208ENST00000530887 GPATCH4Q5T3I0 446 aaKnown RBP21.43■■□□□ 1.02
PSMC3-208ENST00000530887 GPHNQ9NQX3 736 aaPredicted RBP21.43■■□□□ 1.02
PSMC3-208ENST00000530887 ASTN1O14525 1302 aa21.43■■□□□ 1.02
PSMC3-208ENST00000530887 FGAP02671 866 aa21.42■■□□□ 1.02
PSMC3-208ENST00000530887 ALDH5A1P51649 535 aaPredicted RBP21.42■■□□□ 1.02
PSMC3-208ENST00000530887 RRP1P56182 461 aaKnown RBP21.42■■□□□ 1.02
PSMC3-208ENST00000530887 GRIN2CQ14957 1233 aa21.42■■□□□ 1.02
PSMC3-208ENST00000530887 MFSD6Q6ZSS7 791 aa21.42■■□□□ 1.02
PSMC3-208ENST00000530887 FBXO16Q8IX29 292 aaPredicted RBP21.42■■□□□ 1.02
PSMC3-208ENST00000530887 TMEM47Q9BQJ4 181 aa21.42■■□□□ 1.02
PSMC3-208ENST00000530887 PBX4Q9BYU1 374 aa21.42■■□□□ 1.02
PSMC3-208ENST00000530887 MYO9BQ13459 2157 aa21.41■■□□□ 1.02
PSMC3-208ENST00000530887 LRRC37A2A6NM11 1700 aa21.41■■□□□ 1.02
PSMC3-208ENST00000530887 RBM47A0AV96 593 aaKnown RBP21.41■■□□□ 1.02
PSMC3-208ENST00000530887 NMT2O60551 498 aa21.41■■□□□ 1.02
PSMC3-208ENST00000530887 BAATQ14032 418 aaPredicted RBP21.41■■□□□ 1.02
PSMC3-208ENST00000530887 C16orf59Q7L2K0 433 aa21.41■■□□□ 1.02
PSMC3-208ENST00000530887 WDR11Q9BZH6 1224 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms