RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 SLC23A3Q6PIS1 610 aa9.84□□□□□ -0.83
CHKA-205ENST00000530730 PI4K2BQ8TCG2 481 aa9.84□□□□□ -0.83
CHKA-205ENST00000530730 WNT10AQ9GZT5 417 aa9.84□□□□□ -0.83
CHKA-205ENST00000530730 RC3H2Q9HBD1 1191 aaKnown RBP9.84□□□□□ -0.83
CHKA-205ENST00000530730 TACC3Q9Y6A5 838 aa9.84□□□□□ -0.83
CHKA-205ENST00000530730 AK5Q9Y6K8 562 aa9.84□□□□□ -0.83
CHKA-205ENST00000530730 FAM208AQ9UK61 1670 aaKnown RBP9.83□□□□□ -0.84
CHKA-205ENST00000530730 ITIH2P19823 946 aa9.83□□□□□ -0.84
CHKA-205ENST00000530730 PTPN11Q06124 597 aaPredicted RBP9.83□□□□□ -0.84
CHKA-205ENST00000530730 NKPD1Q17RQ9 610 aa9.83□□□□□ -0.84
CHKA-205ENST00000530730 TTBK2Q6IQ55 1244 aa9.83□□□□□ -0.84
CHKA-205ENST00000530730 PRDM5Q9NQX1 630 aaPredicted RBP9.83□□□□□ -0.84
CHKA-205ENST00000530730 FLT4P35916 1363 aa9.83□□□□□ -0.84
CHKA-205ENST00000530730 PCDH11XQ9BZA7 1347 aa9.82□□□□□ -0.84
CHKA-205ENST00000530730 PCDH11YQ9BZA8 1340 aa9.82□□□□□ -0.84
CHKA-205ENST00000530730 SMG6Q86US8 1419 aaKnown RBP9.82□□□□□ -0.84
CHKA-205ENST00000530730 PPM1GO15355 546 aaPredicted RBP9.82□□□□□ -0.84
CHKA-205ENST00000530730 CD96P40200 585 aa9.82□□□□□ -0.84
CHKA-205ENST00000530730 PLPPR2Q96GM1 343 aa9.82□□□□□ -0.84
CHKA-205ENST00000530730 KIF24Q5T7B8 1368 aa9.82□□□□□ -0.84
CHKA-205ENST00000530730 GNAT3A8MTJ3 354 aa9.81□□□□□ -0.84
CHKA-205ENST00000530730 C1QTNF8P60827 252 aa9.81□□□□□ -0.84
CHKA-205ENST00000530730 SLBPQ14493 270 aaKnown RBP eCLIP9.81□□□□□ -0.84
CHKA-205ENST00000530730 MFSD2AQ8NA29 543 aa9.81□□□□□ -0.84
CHKA-205ENST00000530730 PIGBQ92521 554 aa9.81□□□□□ -0.84
CHKA-205ENST00000530730 FOXQ1Q9C009 403 aa9.81□□□□□ -0.84
CHKA-205ENST00000530730 CLSPNQ9HAW4 1339 aa9.81□□□□□ -0.84
CHKA-205ENST00000530730 RGPD2P0DJD1 1756 aa9.8□□□□□ -0.84
CHKA-205ENST00000530730 PALLDQ8WX93 1383 aa9.8□□□□□ -0.84
CHKA-205ENST00000530730 HMGB2P26583 209 aaKnown RBP9.8□□□□□ -0.84
CHKA-205ENST00000530730 SND1Q7KZF4 910 aaKnown RBP eCLIP9.8□□□□□ -0.84
CHKA-205ENST00000530730 LRRN4CLQ8ND94 238 aa9.8□□□□□ -0.84
CHKA-205ENST00000530730 FLAD1Q8NFF5 587 aa9.8□□□□□ -0.84
CHKA-205ENST00000530730 SMARCC1Q92922 1105 aaPredicted RBP9.8□□□□□ -0.84
CHKA-205ENST00000530730 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.8□□□□□ -0.84
CHKA-205ENST00000530730 WASHC2AQ641Q2 1341 aa9.8□□□□□ -0.84
CHKA-205ENST00000530730 PITPNM2Q9BZ72 1349 aa9.8□□□□□ -0.84
CHKA-205ENST00000530730 DOT1LQ8TEK3 1739 aa9.79□□□□□ -0.84
CHKA-205ENST00000530730 SHANK3Q9BYB0 1731 aa9.79□□□□□ -0.84
CHKA-205ENST00000530730 PRAMEF27A3QJZ7 478 aa9.79□□□□□ -0.84
CHKA-205ENST00000530730 GRIN3BO60391 1043 aa9.79□□□□□ -0.84
CHKA-205ENST00000530730 SLITRK5O94991 958 aa9.79□□□□□ -0.84
CHKA-205ENST00000530730 ZNF865P0CJ78 1059 aaPredicted RBP9.79□□□□□ -0.84
CHKA-205ENST00000530730 CCDC85BQ15834 202 aaPredicted RBP9.79□□□□□ -0.84
CHKA-205ENST00000530730 WIPI1Q5MNZ9 446 aaPredicted RBP9.79□□□□□ -0.84
CHKA-205ENST00000530730 AGMOQ6ZNB7 445 aa9.79□□□□□ -0.84
CHKA-205ENST00000530730 SMIM5Q71RC9 77 aa9.79□□□□□ -0.84
CHKA-205ENST00000530730 AMIGO3Q86WK7 504 aa9.79□□□□□ -0.84
CHKA-205ENST00000530730 HID1Q8IV36 788 aa9.79□□□□□ -0.84
CHKA-205ENST00000530730 FBRSQ9HAH7 460 aa9.79□□□□□ -0.84
CHKA-205ENST00000530730 POLKQ9UBT6 870 aa9.79□□□□□ -0.84
CHKA-205ENST00000530730 CD2APQ9Y5K6 639 aa9.79□□□□□ -0.84
CHKA-205ENST00000530730 NSD3Q9BZ95 1437 aa9.79□□□□□ -0.84
CHKA-205ENST00000530730 LY75O60449 1722 aa9.79□□□□□ -0.84
CHKA-205ENST00000530730 ARID1BQ8NFD5 2236 aaPredicted RBP9.78□□□□□ -0.84
CHKA-205ENST00000530730 EAPPQ56P03 285 aaPredicted RBP9.78□□□□□ -0.84
CHKA-205ENST00000530730 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.78□□□□□ -0.84
CHKA-205ENST00000530730 LMCD1Q9NZU5 365 aa9.78□□□□□ -0.84
CHKA-205ENST00000530730 COL24A1Q17RW2 1714 aa9.78□□□□□ -0.84
CHKA-205ENST00000530730 QSER1Q2KHR3 1735 aa9.78□□□□□ -0.84
CHKA-205ENST00000530730 GFRA2O00451 464 aa9.77□□□□□ -0.85
CHKA-205ENST00000530730 ZNF746Q6NUN9 644 aaPredicted RBP9.77□□□□□ -0.85
CHKA-205ENST00000530730 TMEM40Q8WWA1 233 aa9.77□□□□□ -0.85
CHKA-205ENST00000530730 COX4I2Q96KJ9 171 aa9.77□□□□□ -0.85
CHKA-205ENST00000530730 DUSP9Q99956 384 aaKnown RBP9.77□□□□□ -0.85
CHKA-205ENST00000530730 POLR3GLQ9BT43 218 aa9.77□□□□□ -0.85
CHKA-205ENST00000530730 ASAP1Q9ULH1 1129 aa9.77□□□□□ -0.85
CHKA-205ENST00000530730 NCAPD2Q15021 1401 aa9.76□□□□□ -0.85
CHKA-205ENST00000530730 ANKRD33BA6NCL7 494 aa9.76□□□□□ -0.85
CHKA-205ENST00000530730 RLBP1P12271 317 aa9.76□□□□□ -0.85
CHKA-205ENST00000530730 PHKG2P15735 406 aa9.76□□□□□ -0.85
CHKA-205ENST00000530730 TNNT2P45379 298 aaPredicted RBP9.76□□□□□ -0.85
CHKA-205ENST00000530730 ETF1P62495 437 aaKnown RBP9.76□□□□□ -0.85
CHKA-205ENST00000530730 NKG7Q16617 165 aa9.76□□□□□ -0.85
CHKA-205ENST00000530730 IFNL2Q8IZJ0 200 aa9.76□□□□□ -0.85
CHKA-205ENST00000530730 LINC00116Q8NCU8 138 aa9.76□□□□□ -0.85
CHKA-205ENST00000530730 FAM168AQ92567 244 aa9.76□□□□□ -0.85
CHKA-205ENST00000530730 TMOD3Q9NYL9 352 aa9.76□□□□□ -0.85
CHKA-205ENST00000530730 TUBGCP6Q96RT7 1819 aa9.75□□□□□ -0.85
CHKA-205ENST00000530730 CST3P01034 146 aaPredicted RBP9.75□□□□□ -0.85
CHKA-205ENST00000530730 C8AP07357 584 aa9.75□□□□□ -0.85
CHKA-205ENST00000530730 LIG3P49916 1009 aa9.75□□□□□ -0.85
CHKA-205ENST00000530730 ZP2Q05996 745 aa9.75□□□□□ -0.85
CHKA-205ENST00000530730 IKZF1Q13422 519 aa9.75□□□□□ -0.85
CHKA-205ENST00000530730 ITPK1Q13572 414 aa9.75□□□□□ -0.85
CHKA-205ENST00000530730 EIF4A2Q14240 407 aaKnown RBP9.75□□□□□ -0.85
CHKA-205ENST00000530730 SFRP5Q5T4F7 317 aa9.75□□□□□ -0.85
CHKA-205ENST00000530730 NOC4LQ9BVI4 516 aaKnown RBP9.75□□□□□ -0.85
CHKA-205ENST00000530730 CHD4Q14839 1912 aa9.74□□□□□ -0.85
CHKA-205ENST00000530730 LMNB1P20700 586 aa9.74□□□□□ -0.85
CHKA-205ENST00000530730 ST13P50502 369 aaKnown RBP9.74□□□□□ -0.85
CHKA-205ENST00000530730 MFSD4AQ8N468 514 aa9.74□□□□□ -0.85
CHKA-205ENST00000530730 MIPEPQ99797 713 aa9.74□□□□□ -0.85
CHKA-205ENST00000530730 SEMA3GQ9NS98 782 aa9.74□□□□□ -0.85
CHKA-205ENST00000530730 CDK8P49336 464 aa9.73□□□□□ -0.85
CHKA-205ENST00000530730 LETMD1Q6P1Q0 360 aa9.73□□□□□ -0.85
CHKA-205ENST00000530730 MRPL41Q8IXM3 137 aaKnown RBP9.73□□□□□ -0.85
CHKA-205ENST00000530730 PANK3Q9H999 370 aa9.73□□□□□ -0.85
CHKA-205ENST00000530730 TPX2Q9ULW0 747 aaKnown RBP9.73□□□□□ -0.85
CHKA-205ENST00000530730 PCDHB5Q9Y5E4 795 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms