RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 PFKFB2O60825 505 aa17.14■□□□□ 0.33
SRPRA-204ENST00000530680 KCTD2Q14681 263 aa17.14■□□□□ 0.33
SRPRA-204ENST00000530680 PLEKHH3Q7Z736 793 aa17.14■□□□□ 0.33
SRPRA-204ENST00000530680 REPS2Q8NFH8 660 aa17.14■□□□□ 0.33
SRPRA-204ENST00000530680 GTF3C6Q969F1 213 aa17.14■□□□□ 0.33
SRPRA-204ENST00000530680 SLC26A6Q9BXS9 759 aa17.14■□□□□ 0.33
SRPRA-204ENST00000530680 PORCNQ9H237 461 aa17.14■□□□□ 0.33
SRPRA-204ENST00000530680 ACAD9Q9H845 621 aa17.14■□□□□ 0.33
SRPRA-204ENST00000530680 ABCB11O95342 1321 aa17.14■□□□□ 0.33
SRPRA-204ENST00000530680 FCER1AP12319 257 aa17.13■□□□□ 0.33
SRPRA-204ENST00000530680 SSRP1Q08945 709 aaKnown RBP17.13■□□□□ 0.33
SRPRA-204ENST00000530680 SCRN1Q12765 414 aa17.13■□□□□ 0.33
SRPRA-204ENST00000530680 ME3Q16798 604 aa17.13■□□□□ 0.33
SRPRA-204ENST00000530680 Q3C1V9 767 aa17.13■□□□□ 0.33
SRPRA-204ENST00000530680 HEATR3Q7Z4Q2 680 aa17.13■□□□□ 0.33
SRPRA-204ENST00000530680 GPR142Q7Z601 462 aa17.13■□□□□ 0.33
SRPRA-204ENST00000530680 NBPF11Q86T75 865 aa17.13■□□□□ 0.33
SRPRA-204ENST00000530680 HSCBQ8IWL3 235 aa17.13■□□□□ 0.33
SRPRA-204ENST00000530680 NECAB1Q8N987 351 aa17.13■□□□□ 0.33
SRPRA-204ENST00000530680 CHST13Q8NET6 341 aa17.13■□□□□ 0.33
SRPRA-204ENST00000530680 TRERF1Q96PN7 1200 aa17.13■□□□□ 0.33
SRPRA-204ENST00000530680 MMP19Q99542 508 aa17.13■□□□□ 0.33
SRPRA-204ENST00000530680 PLXNA1Q9UIW2 1896 aa17.13■□□□□ 0.33
SRPRA-204ENST00000530680 ZNF236Q9UL36 1845 aa17.12■□□□□ 0.33
SRPRA-204ENST00000530680 ZNFX1Q9P2E3 1918 aaKnown RBP17.12■□□□□ 0.33
SRPRA-204ENST00000530680 hCG_1642624A0A1W2PR95 340 aa17.12■□□□□ 0.33
SRPRA-204ENST00000530680 CYTH3O43739 400 aa17.12■□□□□ 0.33
SRPRA-204ENST00000530680 GNRH1P01148 92 aa17.12■□□□□ 0.33
SRPRA-204ENST00000530680 EN2P19622 333 aaPredicted RBP17.12■□□□□ 0.33
SRPRA-204ENST00000530680 CCDC83Q8IWF9 413 aa17.12■□□□□ 0.33
SRPRA-204ENST00000530680 ANKRD35Q8N283 1001 aa17.12■□□□□ 0.33
SRPRA-204ENST00000530680 SOCS4Q8WXH5 440 aa17.12■□□□□ 0.33
SRPRA-204ENST00000530680 PHKBQ93100 1093 aa17.12■□□□□ 0.33
SRPRA-204ENST00000530680 ARHGAP39Q9C0H5 1083 aa17.12■□□□□ 0.33
SRPRA-204ENST00000530680 MRPL11Q9Y3B7 192 aaKnown RBP17.12■□□□□ 0.33
SRPRA-204ENST00000530680 PCDHA1Q9Y5I3 950 aa17.12■□□□□ 0.33
SRPRA-204ENST00000530680 CEP290O15078 2479 aa17.11■□□□□ 0.33
SRPRA-204ENST00000530680 LARGE1O95461 756 aa17.11■□□□□ 0.33
SRPRA-204ENST00000530680 IFNAR1P17181 557 aa17.11■□□□□ 0.33
SRPRA-204ENST00000530680 POTEEQ6S8J3 1075 aa17.11■□□□□ 0.33
SRPRA-204ENST00000530680 NSMFQ6X4W1 530 aa17.11■□□□□ 0.33
SRPRA-204ENST00000530680 DDX11Q96FC9 970 aa17.11■□□□□ 0.33
SRPRA-204ENST00000530680 TRIM47Q96LD4 638 aa17.11■□□□□ 0.33
SRPRA-204ENST00000530680 NUDT12Q9BQG2 462 aa17.11■□□□□ 0.33
SRPRA-204ENST00000530680 TMEM106CQ9BVX2 250 aa17.11■□□□□ 0.33
SRPRA-204ENST00000530680 RNF26Q9BY78 433 aaPredicted RBP17.11■□□□□ 0.33
SRPRA-204ENST00000530680 FAM217BQ9NTX9 383 aaPredicted RBP17.11■□□□□ 0.33
SRPRA-204ENST00000530680 SLC5A4Q9NY91 659 aa17.11■□□□□ 0.33
SRPRA-204ENST00000530680 V9GY48 417 aaPredicted RBP17.11■□□□□ 0.33
SRPRA-204ENST00000530680 ZNF536O15090 1300 aa17.11■□□□□ 0.33
SRPRA-204ENST00000530680 SMCHD1A6NHR9 2005 aa17.11■□□□□ 0.33
SRPRA-204ENST00000530680 DOCK3Q8IZD9 2030 aa17.1■□□□□ 0.33
SRPRA-204ENST00000530680 PTPDC1A2A3K4 754 aa17.1■□□□□ 0.33
SRPRA-204ENST00000530680 STRNO43815 780 aa17.1■□□□□ 0.33
SRPRA-204ENST00000530680 PPFIA3O75145 1194 aa17.1■□□□□ 0.33
SRPRA-204ENST00000530680 TAL1P17542 331 aaPredicted RBP17.1■□□□□ 0.33
SRPRA-204ENST00000530680 FXR1P51114 621 aaKnown RBP eCLIP17.1■□□□□ 0.33
SRPRA-204ENST00000530680 NAPAP54920 295 aa17.1■□□□□ 0.33
SRPRA-204ENST00000530680 DPP9Q86TI2 863 aa17.1■□□□□ 0.33
SRPRA-204ENST00000530680 MCF2L2Q86YR7 1114 aa17.1■□□□□ 0.33
SRPRA-204ENST00000530680 RAET1EQ8TD07 263 aa17.1■□□□□ 0.33
SRPRA-204ENST00000530680 CCDC12Q8WUD4 166 aaPredicted RBP17.1■□□□□ 0.33
SRPRA-204ENST00000530680 MTMR8Q96EF0 704 aa17.1■□□□□ 0.33
SRPRA-204ENST00000530680 RIPK3Q9Y572 518 aa17.1■□□□□ 0.33
SRPRA-204ENST00000530680 PFASO15067 1338 aa17.1■□□□□ 0.33
SRPRA-204ENST00000530680 SLC15A5A6NIM6 579 aa17.09■□□□□ 0.33
SRPRA-204ENST00000530680 hCG_1984214I3L0E3 225 aa17.09■□□□□ 0.33
SRPRA-204ENST00000530680 DEXIO95424 95 aa17.09■□□□□ 0.33
SRPRA-204ENST00000530680 XBP1P17861 261 aa17.09■□□□□ 0.33
SRPRA-204ENST00000530680 RGS2P41220 211 aa17.09■□□□□ 0.33
SRPRA-204ENST00000530680 ZNF713Q8N859 430 aaPredicted RBP17.09■□□□□ 0.33
SRPRA-204ENST00000530680 WASF1Q92558 559 aa17.09■□□□□ 0.33
SRPRA-204ENST00000530680 GPKOWQ92917 476 aaPredicted RBP eCLIP17.09■□□□□ 0.33
SRPRA-204ENST00000530680 CUL5Q93034 780 aa17.09■□□□□ 0.33
SRPRA-204ENST00000530680 ZNF333Q96JL9 665 aa17.09■□□□□ 0.33
SRPRA-204ENST00000530680 STK36Q9NRP7 1315 aa17.08■□□□□ 0.32
SRPRA-204ENST00000530680 PRPF3O43395 683 aaKnown RBP17.08■□□□□ 0.32
SRPRA-204ENST00000530680 HSP90AA1P07900 732 aaKnown RBP17.08■□□□□ 0.32
SRPRA-204ENST00000530680 SCG2P13521 617 aa17.08■□□□□ 0.32
SRPRA-204ENST00000530680 PTPREP23469 700 aa17.08■□□□□ 0.32
SRPRA-204ENST00000530680 ADORA2AP29274 412 aa17.08■□□□□ 0.32
SRPRA-204ENST00000530680 PRMT2P55345 433 aa17.08■□□□□ 0.32
SRPRA-204ENST00000530680 CAP1Q01518 475 aa17.08■□□□□ 0.32
SRPRA-204ENST00000530680 SLC35G1Q2M3R5 365 aa17.08■□□□□ 0.32
SRPRA-204ENST00000530680 MUM1L1Q5H9M0 696 aa17.08■□□□□ 0.32
SRPRA-204ENST00000530680 RNF207Q6ZRF8 634 aa17.08■□□□□ 0.32
SRPRA-204ENST00000530680 CCDC148Q8NFR7 591 aa17.08■□□□□ 0.32
SRPRA-204ENST00000530680 SRRDQ9UH36 339 aa17.08■□□□□ 0.32
SRPRA-204ENST00000530680 KIF3AQ9Y496 699 aa17.08■□□□□ 0.32
SRPRA-204ENST00000530680 NFIBO00712 420 aa17.07■□□□□ 0.32
SRPRA-204ENST00000530680 CD2BP2O95400 341 aaKnown RBP17.07■□□□□ 0.32
SRPRA-204ENST00000530680 CFBP00751 764 aa17.07■□□□□ 0.32
SRPRA-204ENST00000530680 CALML3P27482 149 aa17.07■□□□□ 0.32
SRPRA-204ENST00000530680 PRKCZQ05513 592 aa17.07■□□□□ 0.32
SRPRA-204ENST00000530680 FUT2Q10981 343 aa17.07■□□□□ 0.32
SRPRA-204ENST00000530680 GRB14Q14449 540 aa17.07■□□□□ 0.32
SRPRA-204ENST00000530680 NTRK3Q16288 839 aa17.07■□□□□ 0.32
SRPRA-204ENST00000530680 PFKFB3Q16875 520 aaPredicted RBP17.07■□□□□ 0.32
SRPRA-204ENST00000530680 SLC9C1Q4G0N8 1177 aa17.07■□□□□ 0.32
SRPRA-204ENST00000530680 PPP1R18Q6NYC8 613 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms