RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 KIFC2Q96AC6 838 aa12.79□□□□□ -0.36
TM9SF1-210ENST00000530563 STRBPQ96SI9 672 aaKnown RBP12.79□□□□□ -0.36
TM9SF1-210ENST00000530563 HAUS7Q99871 368 aa12.79□□□□□ -0.36
TM9SF1-210ENST00000530563 BOLA2Q9H3K6 86 aa12.79□□□□□ -0.36
TM9SF1-210ENST00000530563 CLIP2Q9UDT6 1046 aa12.79□□□□□ -0.36
TM9SF1-210ENST00000530563 GSG1L2A8MUP6 293 aa12.78□□□□□ -0.36
TM9SF1-210ENST00000530563 DYNC1LI2O43237 492 aaPredicted RBP12.78□□□□□ -0.36
TM9SF1-210ENST00000530563 GPR37L1O60883 481 aa12.78□□□□□ -0.36
TM9SF1-210ENST00000530563 AMOTL1Q8IY63 956 aa12.78□□□□□ -0.36
TM9SF1-210ENST00000530563 KIF1BPQ96EK5 621 aa12.78□□□□□ -0.36
TM9SF1-210ENST00000530563 ALDH8A1Q9H2A2 487 aaPredicted RBP12.78□□□□□ -0.36
TM9SF1-210ENST00000530563 CERS4Q9HA82 394 aa12.78□□□□□ -0.36
TM9SF1-210ENST00000530563 CD320Q9NPF0 282 aa12.78□□□□□ -0.36
TM9SF1-210ENST00000530563 A1CFQ9NQ94 594 aaKnown RBP12.78□□□□□ -0.36
TM9SF1-210ENST00000530563 FEM1BQ9UK73 627 aa12.78□□□□□ -0.36
TM9SF1-210ENST00000530563 COG5Q9UP83 839 aa12.78□□□□□ -0.36
TM9SF1-210ENST00000530563 BRWD1Q9NSI6 2320 aa12.78□□□□□ -0.36
TM9SF1-210ENST00000530563 LPXNO60711 386 aa12.77□□□□□ -0.37
TM9SF1-210ENST00000530563 IFIT2P09913 472 aaKnown RBP12.77□□□□□ -0.37
TM9SF1-210ENST00000530563 TAP1Q03518 808 aa12.77□□□□□ -0.37
TM9SF1-210ENST00000530563 TMEM67Q5HYA8 995 aa12.77□□□□□ -0.37
TM9SF1-210ENST00000530563 TMEM31Q5JXX7 168 aa12.77□□□□□ -0.37
TM9SF1-210ENST00000530563 FTSJ3Q8IY81 847 aaKnown RBP12.77□□□□□ -0.37
TM9SF1-210ENST00000530563 GMCL1P1Q8NEA9 526 aa12.77□□□□□ -0.37
TM9SF1-210ENST00000530563 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.77□□□□□ -0.37
TM9SF1-210ENST00000530563 TRMT13Q9NUP7 481 aaKnown RBP12.77□□□□□ -0.37
TM9SF1-210ENST00000530563 MTMR4Q9NYA4 1195 aa12.77□□□□□ -0.37
TM9SF1-210ENST00000530563 ARPP21Q9UBL0 812 aaPredicted RBP12.77□□□□□ -0.37
TM9SF1-210ENST00000530563 SYNPO2Q9UMS6 1093 aa12.77□□□□□ -0.37
TM9SF1-210ENST00000530563 Q9Y3F1 56 aa12.77□□□□□ -0.37
TM9SF1-210ENST00000530563 LRRC37A2A6NM11 1700 aa12.76□□□□□ -0.37
TM9SF1-210ENST00000530563 ASB14A6NK59 587 aa12.76□□□□□ -0.37
TM9SF1-210ENST00000530563 ZBBXA8MT70 800 aa12.76□□□□□ -0.37
TM9SF1-210ENST00000530563 PFKMP08237 780 aa12.76□□□□□ -0.37
TM9SF1-210ENST00000530563 CYP2C9P11712 490 aa12.76□□□□□ -0.37
TM9SF1-210ENST00000530563 SKIV2LQ15477 1246 aaKnown RBP12.76□□□□□ -0.37
TM9SF1-210ENST00000530563 IQSEC1Q6DN90 963 aa12.76□□□□□ -0.37
TM9SF1-210ENST00000530563 NOL8Q76FK4 1167 aaKnown RBP12.76□□□□□ -0.37
TM9SF1-210ENST00000530563 SPRED2Q7Z698 418 aa12.76□□□□□ -0.37
TM9SF1-210ENST00000530563 RPAP2Q8IXW5 612 aaPredicted RBP12.76□□□□□ -0.37
TM9SF1-210ENST00000530563 MORC4Q8TE76 937 aa12.76□□□□□ -0.37
TM9SF1-210ENST00000530563 CEP95Q96GE4 821 aa12.76□□□□□ -0.37
TM9SF1-210ENST00000530563 AP5M1Q9H0R1 490 aa12.76□□□□□ -0.37
TM9SF1-210ENST00000530563 ACAD9Q9H845 621 aa12.76□□□□□ -0.37
TM9SF1-210ENST00000530563 HOMER2Q9NSB8 354 aa12.76□□□□□ -0.37
TM9SF1-210ENST00000530563 USP34Q70CQ2 3546 aa12.75□□□□□ -0.37
TM9SF1-210ENST00000530563 BMP3P12645 472 aa12.75□□□□□ -0.37
TM9SF1-210ENST00000530563 GIMAP6Q6P9H5 292 aa12.75□□□□□ -0.37
TM9SF1-210ENST00000530563 STK11IPQ8N1F8 1099 aa12.75□□□□□ -0.37
TM9SF1-210ENST00000530563 PHOSPHO2Q8TCD6 241 aa12.75□□□□□ -0.37
TM9SF1-210ENST00000530563 PANK1Q8TE04 598 aa12.75□□□□□ -0.37
TM9SF1-210ENST00000530563 HLA-CQ95604 372 aa12.75□□□□□ -0.37
TM9SF1-210ENST00000530563 DDRGK1Q96HY6 314 aa12.75□□□□□ -0.37
TM9SF1-210ENST00000530563 PURBQ96QR8 312 aaKnown RBP12.75□□□□□ -0.37
TM9SF1-210ENST00000530563 C5orf42Q9H799 3197 aa12.75□□□□□ -0.37
TM9SF1-210ENST00000530563 MKNK2Q9HBH9 465 aa12.75□□□□□ -0.37
TM9SF1-210ENST00000530563 EPB41L4AQ9HCS5 686 aaPredicted RBP12.75□□□□□ -0.37
TM9SF1-210ENST00000530563 RNF146Q9NTX7 359 aa12.75□□□□□ -0.37
TM9SF1-210ENST00000530563 HCN4Q9Y3Q4 1203 aa12.75□□□□□ -0.37
TM9SF1-210ENST00000530563 SCN5AQ14524 2016 aa12.74□□□□□ -0.37
TM9SF1-210ENST00000530563 TNKSO95271 1327 aa12.74□□□□□ -0.37
TM9SF1-210ENST00000530563 PI4K2BG5E9Z4 385 aa12.74□□□□□ -0.37
TM9SF1-210ENST00000530563 GTPBP6O43824 516 aaPredicted RBP12.74□□□□□ -0.37
TM9SF1-210ENST00000530563 ZEB2O60315 1214 aa12.74□□□□□ -0.37
TM9SF1-210ENST00000530563 PRDM1O75626 825 aa12.74□□□□□ -0.37
TM9SF1-210ENST00000530563 FDX1P10109 184 aa12.74□□□□□ -0.37
TM9SF1-210ENST00000530563 PURAQ00577 322 aaKnown RBP12.74□□□□□ -0.37
TM9SF1-210ENST00000530563 GRB10Q13322 594 aa12.74□□□□□ -0.37
TM9SF1-210ENST00000530563 MUM1L1Q5H9M0 696 aa12.74□□□□□ -0.37
TM9SF1-210ENST00000530563 SLFN13Q68D06 897 aa12.74□□□□□ -0.37
TM9SF1-210ENST00000530563 DEFB128Q7Z7B8 93 aa12.74□□□□□ -0.37
TM9SF1-210ENST00000530563 FBXO16Q8IX29 292 aaPredicted RBP12.74□□□□□ -0.37
TM9SF1-210ENST00000530563 LRRC47Q8N1G4 583 aaKnown RBP12.74□□□□□ -0.37
TM9SF1-210ENST00000530563 ARNTL2Q8WYA1 636 aa12.74□□□□□ -0.37
TM9SF1-210ENST00000530563 OSBP2Q969R2 916 aa12.74□□□□□ -0.37
TM9SF1-210ENST00000530563 TRERF1Q96PN7 1200 aa12.74□□□□□ -0.37
TM9SF1-210ENST00000530563 CYP39A1Q9NYL5 469 aa12.74□□□□□ -0.37
TM9SF1-210ENST00000530563 CTDP1Q9Y5B0 961 aaPredicted RBP12.74□□□□□ -0.37
TM9SF1-210ENST00000530563 LCTP09848 1927 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 MYH4Q9Y623 1939 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 FAM86C2PA6NEL3 165 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 MINDY4BA8MYZ0 360 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 TMEM232C9JQI7 657 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 PLA2G6O60733 806 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 RAB11FIP3O75154 756 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 TTLL1O95922 423 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 SUPT20HL2P0C7V6 817 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 GPNMBQ14956 572 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 TKFCQ3LXA3 575 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 DUSP28Q4G0W2 176 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 EEPD1Q7L9B9 569 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 HERC6Q8IVU3 1022 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 NEDD1Q8NHV4 660 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 STAG1Q8WVM7 1258 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 GMCL1Q96IK5 515 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 SLC9A7Q96T83 725 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 VTA1Q9NP79 307 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 COG6Q9Y2V7 657 aa12.73□□□□□ -0.37
TM9SF1-210ENST00000530563 MYH7P12883 1935 aa12.72□□□□□ -0.37
TM9SF1-210ENST00000530563 PLIN4Q96Q06 1357 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms