RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 RAVER2Q9HCJ3 691 aaKnown RBP13.97□□□□□ -0.17
AMBRA1-207ENST00000529553 POLR3EQ9NVU0 708 aa13.97□□□□□ -0.17
AMBRA1-207ENST00000529553 FEM1BQ9UK73 627 aa13.97□□□□□ -0.17
AMBRA1-207ENST00000529553 GBF1Q92538 1859 aa13.97□□□□□ -0.17
AMBRA1-207ENST00000529553 MYO5AQ9Y4I1 1855 aaKnown RBP13.97□□□□□ -0.17
AMBRA1-207ENST00000529553 TNKSO95271 1327 aa13.96□□□□□ -0.17
AMBRA1-207ENST00000529553 ARHGEF15O94989 841 aa13.96□□□□□ -0.17
AMBRA1-207ENST00000529553 IQCF3P0C7M6 154 aa13.96□□□□□ -0.17
AMBRA1-207ENST00000529553 CYP2C9P11712 490 aa13.96□□□□□ -0.17
AMBRA1-207ENST00000529553 SSTR3P32745 418 aaPredicted RBP13.96□□□□□ -0.17
AMBRA1-207ENST00000529553 PSMC6P62333 389 aa13.96□□□□□ -0.17
AMBRA1-207ENST00000529553 ERC1Q8IUD2 1116 aa13.96□□□□□ -0.17
AMBRA1-207ENST00000529553 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.96□□□□□ -0.17
AMBRA1-207ENST00000529553 NUP88Q99567 741 aaPredicted RBP13.96□□□□□ -0.17
AMBRA1-207ENST00000529553 ARMT1Q9H993 441 aa13.96□□□□□ -0.17
AMBRA1-207ENST00000529553 TRMT13Q9NUP7 481 aaKnown RBP13.96□□□□□ -0.17
AMBRA1-207ENST00000529553 SYNPO2Q9UMS6 1093 aa13.96□□□□□ -0.17
AMBRA1-207ENST00000529553 PARP14Q460N5 1801 aa13.96□□□□□ -0.17
AMBRA1-207ENST00000529553 COL11A1P12107 1806 aaPredicted RBP13.95□□□□□ -0.18
AMBRA1-207ENST00000529553 GRXCR2A6NFK2 248 aa13.95□□□□□ -0.18
AMBRA1-207ENST00000529553 DCXO43602 365 aa13.95□□□□□ -0.18
AMBRA1-207ENST00000529553 PRKAB2O43741 272 aa13.95□□□□□ -0.18
AMBRA1-207ENST00000529553 NDUFB10O96000 172 aa13.95□□□□□ -0.18
AMBRA1-207ENST00000529553 TKFCQ3LXA3 575 aa13.95□□□□□ -0.18
AMBRA1-207ENST00000529553 TAPT1Q6NXT6 567 aa13.95□□□□□ -0.18
AMBRA1-207ENST00000529553 MKL1Q969V6 931 aa13.95□□□□□ -0.18
AMBRA1-207ENST00000529553 KIFC2Q96AC6 838 aa13.95□□□□□ -0.18
AMBRA1-207ENST00000529553 FTOQ9C0B1 505 aaKnown RBP eCLIP13.95□□□□□ -0.18
AMBRA1-207ENST00000529553 ACAD9Q9H845 621 aa13.95□□□□□ -0.18
AMBRA1-207ENST00000529553 SOWAHBA6NEL2 793 aa13.94□□□□□ -0.18
AMBRA1-207ENST00000529553 KCNJ6P48051 423 aa13.94□□□□□ -0.18
AMBRA1-207ENST00000529553 PTPN11Q06124 597 aaPredicted RBP13.94□□□□□ -0.18
AMBRA1-207ENST00000529553 BFSP2Q13515 415 aa13.94□□□□□ -0.18
AMBRA1-207ENST00000529553 LRRFIP1Q32MZ4 808 aaKnown RBP13.94□□□□□ -0.18
AMBRA1-207ENST00000529553 PTCRAQ6ISU1 281 aaPredicted RBP13.94□□□□□ -0.18
AMBRA1-207ENST00000529553 CTR9Q6PD62 1173 aa13.94□□□□□ -0.18
AMBRA1-207ENST00000529553 AACSQ86V21 672 aa13.94□□□□□ -0.18
AMBRA1-207ENST00000529553 RPAP2Q8IXW5 612 aaPredicted RBP13.94□□□□□ -0.18
AMBRA1-207ENST00000529553 MFSD14AQ96MC6 490 aa13.94□□□□□ -0.18
AMBRA1-207ENST00000529553 VTA1Q9NP79 307 aa13.94□□□□□ -0.18
AMBRA1-207ENST00000529553 COG6Q9Y2V7 657 aa13.94□□□□□ -0.18
AMBRA1-207ENST00000529553 ZNF536O15090 1300 aa13.93□□□□□ -0.18
AMBRA1-207ENST00000529553 CYP2D7A0A087X1C5 515 aa13.93□□□□□ -0.18
AMBRA1-207ENST00000529553 MBD4O95243 580 aa13.93□□□□□ -0.18
AMBRA1-207ENST00000529553 CPT1AP50416 773 aa13.93□□□□□ -0.18
AMBRA1-207ENST00000529553 ERVK-21P61565 698 aa13.93□□□□□ -0.18
AMBRA1-207ENST00000529553 PURAQ00577 322 aaKnown RBP13.93□□□□□ -0.18
AMBRA1-207ENST00000529553 DUSP28Q4G0W2 176 aa13.93□□□□□ -0.18
AMBRA1-207ENST00000529553 NFRKBQ6P4R8 1299 aa13.93□□□□□ -0.18
AMBRA1-207ENST00000529553 MORC4Q8TE76 937 aa13.93□□□□□ -0.18
AMBRA1-207ENST00000529553 TGS1Q96RS0 853 aaKnown RBP13.93□□□□□ -0.18
AMBRA1-207ENST00000529553 RAD9AQ99638 391 aa13.93□□□□□ -0.18
AMBRA1-207ENST00000529553 MTG1Q9BT17 334 aaPredicted RBP13.93□□□□□ -0.18
AMBRA1-207ENST00000529553 SUGCTQ9HAC7 445 aa13.93□□□□□ -0.18
AMBRA1-207ENST00000529553 A1CFQ9NQ94 594 aaKnown RBP13.93□□□□□ -0.18
AMBRA1-207ENST00000529553 PDGFCQ9NRA1 345 aa13.93□□□□□ -0.18
AMBRA1-207ENST00000529553 CLIP2Q9UDT6 1046 aa13.93□□□□□ -0.18
AMBRA1-207ENST00000529553 PRKAG3Q9UGI9 489 aa13.93□□□□□ -0.18
AMBRA1-207ENST00000529553 FAM50BQ9Y247 325 aa13.93□□□□□ -0.18
AMBRA1-207ENST00000529553 ZBED9Q6R2W3 1325 aa13.92□□□□□ -0.18
AMBRA1-207ENST00000529553 GOLIM4O00461 696 aa13.92□□□□□ -0.18
AMBRA1-207ENST00000529553 ST18O60284 1047 aa13.92□□□□□ -0.18
AMBRA1-207ENST00000529553 KPNA6O60684 536 aa13.92□□□□□ -0.18
AMBRA1-207ENST00000529553 PARNO95453 639 aaKnown RBP13.92□□□□□ -0.18
AMBRA1-207ENST00000529553 KCNA5P22460 613 aa13.92□□□□□ -0.18
AMBRA1-207ENST00000529553 ADD2P35612 726 aa13.92□□□□□ -0.18
AMBRA1-207ENST00000529553 FOXK2Q01167 660 aa13.92□□□□□ -0.18
AMBRA1-207ENST00000529553 KIAA1211Q6ZU35 1233 aa13.92□□□□□ -0.18
AMBRA1-207ENST00000529553 NEK9Q8TD19 979 aa13.92□□□□□ -0.18
AMBRA1-207ENST00000529553 GDPD5Q8WTR4 605 aa13.92□□□□□ -0.18
AMBRA1-207ENST00000529553 ZBED2Q9BTP6 218 aa13.92□□□□□ -0.18
AMBRA1-207ENST00000529553 UPF3BQ9BZI7 483 aaKnown RBP13.92□□□□□ -0.18
AMBRA1-207ENST00000529553 GPHNQ9NQX3 736 aaPredicted RBP13.92□□□□□ -0.18
AMBRA1-207ENST00000529553 CTNNA3Q9UI47 895 aa13.92□□□□□ -0.18
AMBRA1-207ENST00000529553 NAV1Q8NEY1 1877 aa13.91□□□□□ -0.18
AMBRA1-207ENST00000529553 LOC102724159A0A0B4J2E5 919 aa13.91□□□□□ -0.18
AMBRA1-207ENST00000529553 IL9P15248 144 aa13.91□□□□□ -0.18
AMBRA1-207ENST00000529553 PWP2Q15269 919 aaKnown RBP13.91□□□□□ -0.18
AMBRA1-207ENST00000529553 NBPF20Q3BBV1 942 aa13.91□□□□□ -0.18
AMBRA1-207ENST00000529553 SBK1Q52WX2 424 aa13.91□□□□□ -0.18
AMBRA1-207ENST00000529553 BRDTQ58F21 947 aaPredicted RBP13.91□□□□□ -0.18
AMBRA1-207ENST00000529553 TMEM57Q8N5G2 664 aa13.91□□□□□ -0.18
AMBRA1-207ENST00000529553 GMCL1P1Q8NEA9 526 aa13.91□□□□□ -0.18
AMBRA1-207ENST00000529553 FRAT1Q92837 279 aaPredicted RBP13.91□□□□□ -0.18
AMBRA1-207ENST00000529553 CLUAP1Q96AJ1 413 aa13.91□□□□□ -0.18
AMBRA1-207ENST00000529553 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.91□□□□□ -0.18
AMBRA1-207ENST00000529553 MKNK2Q9HBH9 465 aa13.91□□□□□ -0.18
AMBRA1-207ENST00000529553 ARPP21Q9UBL0 812 aaPredicted RBP13.91□□□□□ -0.18
AMBRA1-207ENST00000529553 IGKV6D-41A0A0C4DH26 115 aa13.9□□□□□ -0.18
AMBRA1-207ENST00000529553 LCHNA4D1U4 455 aa13.9□□□□□ -0.18
AMBRA1-207ENST00000529553 C19orf67A6NJJ6 358 aa13.9□□□□□ -0.18
AMBRA1-207ENST00000529553 BMP3P12645 472 aa13.9□□□□□ -0.18
AMBRA1-207ENST00000529553 RASA1P20936 1047 aa13.9□□□□□ -0.18
AMBRA1-207ENST00000529553 WDR5P61964 334 aaKnown RBP13.9□□□□□ -0.18
AMBRA1-207ENST00000529553 UBE3CQ15386 1083 aa13.9□□□□□ -0.18
AMBRA1-207ENST00000529553 HSP90AB4PQ58FF6 505 aa13.9□□□□□ -0.18
AMBRA1-207ENST00000529553 SPRED2Q7Z698 418 aa13.9□□□□□ -0.18
AMBRA1-207ENST00000529553 CCDC155Q8N6L0 562 aa13.9□□□□□ -0.18
AMBRA1-207ENST00000529553 CAGE1Q8TC20 777 aa13.9□□□□□ -0.18
AMBRA1-207ENST00000529553 CHURC1Q8WUH1 139 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms