RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 SHCBP1Q8NEM2 672 aa13.2□□□□□ -0.3
CHD7-209ENST00000529472 GPKOWQ92917 476 aaPredicted RBP eCLIP13.2□□□□□ -0.3
CHD7-209ENST00000529472 TRERF1Q96PN7 1200 aa13.2□□□□□ -0.3
CHD7-209ENST00000529472 SH2B1Q9NRF2 756 aaPredicted RBP13.2□□□□□ -0.3
CHD7-209ENST00000529472 PNMA2Q9UL42 364 aa13.2□□□□□ -0.3
CHD7-209ENST00000529472 PCDHA1Q9Y5I3 950 aa13.2□□□□□ -0.3
CHD7-209ENST00000529472 IVNS1ABPQ9Y6Y0 642 aa13.2□□□□□ -0.3
CHD7-209ENST00000529472 RBBP6Q7Z6E9 1792 aaKnown RBP13.2□□□□□ -0.3
CHD7-209ENST00000529472 DOCK3Q8IZD9 2030 aa13.19□□□□□ -0.3
CHD7-209ENST00000529472 SSRP1Q08945 709 aaKnown RBP13.19□□□□□ -0.3
CHD7-209ENST00000529472 TKFCQ3LXA3 575 aa13.19□□□□□ -0.3
CHD7-209ENST00000529472 MUM1L1Q5H9M0 696 aa13.19□□□□□ -0.3
CHD7-209ENST00000529472 TRIM22Q8IYM9 498 aa13.19□□□□□ -0.3
CHD7-209ENST00000529472 COA7Q96BR5 231 aa13.19□□□□□ -0.3
CHD7-209ENST00000529472 TMX3Q96JJ7 454 aa13.19□□□□□ -0.3
CHD7-209ENST00000529472 MMP19Q99542 508 aa13.19□□□□□ -0.3
CHD7-209ENST00000529472 ACAD9Q9H845 621 aa13.19□□□□□ -0.3
CHD7-209ENST00000529472 BRCA2P51587 3418 aa13.19□□□□□ -0.3
CHD7-209ENST00000529472 ABCB11O95342 1321 aa13.18□□□□□ -0.3
CHD7-209ENST00000529472 NFIBO00712 420 aa13.18□□□□□ -0.3
CHD7-209ENST00000529472 PRPF3O43395 683 aaKnown RBP13.18□□□□□ -0.3
CHD7-209ENST00000529472 JAK2O60674 1132 aa13.18□□□□□ -0.3
CHD7-209ENST00000529472 CTDNEP1O95476 244 aa13.18□□□□□ -0.3
CHD7-209ENST00000529472 FCER1AP12319 257 aa13.18□□□□□ -0.3
CHD7-209ENST00000529472 KCTD2Q14681 263 aa13.18□□□□□ -0.3
CHD7-209ENST00000529472 ARHGEF6Q15052 776 aa13.18□□□□□ -0.3
CHD7-209ENST00000529472 ANKRD35Q8N283 1001 aa13.18□□□□□ -0.3
CHD7-209ENST00000529472 CHST13Q8NET6 341 aa13.18□□□□□ -0.3
CHD7-209ENST00000529472 RNF26Q9BY78 433 aaPredicted RBP13.18□□□□□ -0.3
CHD7-209ENST00000529472 RBM27Q9P2N5 1060 aaKnown RBP13.18□□□□□ -0.3
CHD7-209ENST00000529472 FBXO40Q9UH90 709 aa13.18□□□□□ -0.3
CHD7-209ENST00000529472 TRIM17Q9Y577 477 aa13.18□□□□□ -0.3
CHD7-209ENST00000529472 PTPDC1A2A3K4 754 aa13.17□□□□□ -0.3
CHD7-209ENST00000529472 SCG2P13521 617 aa13.17□□□□□ -0.3
CHD7-209ENST00000529472 PTPREP23469 700 aa13.17□□□□□ -0.3
CHD7-209ENST00000529472 ADORA2AP29274 412 aa13.17□□□□□ -0.3
CHD7-209ENST00000529472 PRKCZQ05513 592 aa13.17□□□□□ -0.3
CHD7-209ENST00000529472 TRAF1Q13077 416 aa13.17□□□□□ -0.3
CHD7-209ENST00000529472 GRB14Q14449 540 aa13.17□□□□□ -0.3
CHD7-209ENST00000529472 PFKFB3Q16875 520 aaPredicted RBP13.17□□□□□ -0.3
CHD7-209ENST00000529472 WWC2Q6AWC2 1192 aa13.17□□□□□ -0.3
CHD7-209ENST00000529472 NSMFQ6X4W1 530 aa13.17□□□□□ -0.3
CHD7-209ENST00000529472 OTOP1Q7RTM1 612 aa13.17□□□□□ -0.3
CHD7-209ENST00000529472 NSUN7Q8NE18 718 aaKnown RBP13.17□□□□□ -0.3
CHD7-209ENST00000529472 SOCS4Q8WXH5 440 aa13.17□□□□□ -0.3
CHD7-209ENST00000529472 CLEC4DQ8WXI8 215 aa13.17□□□□□ -0.3
CHD7-209ENST00000529472 DDX11Q96FC9 970 aa13.17□□□□□ -0.3
CHD7-209ENST00000529472 A1CFQ9NQ94 594 aaKnown RBP13.17□□□□□ -0.3
CHD7-209ENST00000529472 GABRQQ9UN88 632 aa13.17□□□□□ -0.3
CHD7-209ENST00000529472 MRPL11Q9Y3B7 192 aaKnown RBP13.17□□□□□ -0.3
CHD7-209ENST00000529472 ZNF236Q9UL36 1845 aa13.17□□□□□ -0.3
CHD7-209ENST00000529472 ZNFX1Q9P2E3 1918 aaKnown RBP13.17□□□□□ -0.3
CHD7-209ENST00000529472 SLC15A5A6NIM6 579 aa13.16□□□□□ -0.3
CHD7-209ENST00000529472 STXBP3O00186 592 aa13.16□□□□□ -0.3
CHD7-209ENST00000529472 STRNO43815 780 aa13.16□□□□□ -0.3
CHD7-209ENST00000529472 DEXIO95424 95 aa13.16□□□□□ -0.3
CHD7-209ENST00000529472 PGK2P07205 417 aa13.16□□□□□ -0.3
CHD7-209ENST00000529472 NAPAP54920 295 aa13.16□□□□□ -0.3
CHD7-209ENST00000529472 PKN1Q16512 942 aa13.16□□□□□ -0.3
CHD7-209ENST00000529472 MORN1Q5T089 497 aa13.16□□□□□ -0.3
CHD7-209ENST00000529472 HSCBQ8IWL3 235 aa13.16□□□□□ -0.3
CHD7-209ENST00000529472 NUDT12Q9BQG2 462 aa13.16□□□□□ -0.3
CHD7-209ENST00000529472 BARHL2Q9NY43 387 aa13.16□□□□□ -0.3
CHD7-209ENST00000529472 ORC3Q9UBD5 711 aaPredicted RBP13.16□□□□□ -0.3
CHD7-209ENST00000529472 STK36Q9NRP7 1315 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 PLXNA1Q9UIW2 1896 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 OPLAHO14841 1288 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 CFBP00751 764 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 GNRH1P01148 92 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 CYP2B6P20813 491 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 CALML3P27482 149 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 HOXD10P28358 340 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 FLT3LGP49771 235 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 BAATQ14032 418 aaPredicted RBP13.15□□□□□ -0.3
CHD7-209ENST00000529472 TYW1BQ6NUM6 668 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 SLC30A10Q6XR72 485 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 RNF207Q6ZRF8 634 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 DPP9Q86TI2 863 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 ABRAQ8N0Z2 381 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 SNX21Q969T3 373 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 AIFM3Q96NN9 605 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 PRDM10Q9NQV6 1147 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 CYP39A1Q9NYL5 469 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 VPS54Q9P1Q0 977 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 SRRDQ9UH36 339 aa13.15□□□□□ -0.3
CHD7-209ENST00000529472 PFASO15067 1338 aa13.14□□□□□ -0.31
CHD7-209ENST00000529472 LCTP09848 1927 aa13.14□□□□□ -0.31
CHD7-209ENST00000529472 POTEB2H3BUK9 544 aa13.14□□□□□ -0.31
CHD7-209ENST00000529472 hCG_1984214I3L0E3 225 aa13.14□□□□□ -0.31
CHD7-209ENST00000529472 K7ELQ4 463 aaPredicted RBP13.14□□□□□ -0.31
CHD7-209ENST00000529472 COBLO75128 1261 aa13.14□□□□□ -0.31
CHD7-209ENST00000529472 HOXA13P31271 388 aaPredicted RBP13.14□□□□□ -0.31
CHD7-209ENST00000529472 RGS2P41220 211 aa13.14□□□□□ -0.31
CHD7-209ENST00000529472 FOSBP53539 338 aa13.14□□□□□ -0.31
CHD7-209ENST00000529472 RPS6P62753 249 aaKnown RBP13.14□□□□□ -0.31
CHD7-209ENST00000529472 MAP2K5Q13163 448 aa13.14□□□□□ -0.31
CHD7-209ENST00000529472 PPP1R18Q6NYC8 613 aa13.14□□□□□ -0.31
CHD7-209ENST00000529472 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.14□□□□□ -0.31
CHD7-209ENST00000529472 CTU1Q7Z7A3 348 aaKnown RBP13.14□□□□□ -0.31
CHD7-209ENST00000529472 MCF2L2Q86YR7 1114 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms