RNA–Protein interactions for RNA: ENST00000529446.5

C9orf135-207, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 697 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-207ENST00000529446 ABRAQ8N0Z2 381 aa13.55□□□□□ -0.24
C9orf135-207ENST00000529446 FAM184AQ8NB25 1140 aa13.55□□□□□ -0.24
C9orf135-207ENST00000529446 TRERF1Q96PN7 1200 aa13.55□□□□□ -0.24
C9orf135-207ENST00000529446 ACAD9Q9H845 621 aa13.55□□□□□ -0.24
C9orf135-207ENST00000529446 TSHZ2Q9NRE2 1034 aa13.55□□□□□ -0.24
C9orf135-207ENST00000529446 MAP3K20Q9NYL2 800 aaKnown RBP13.55□□□□□ -0.24
C9orf135-207ENST00000529446 SMC3Q9UQE7 1217 aa13.55□□□□□ -0.24
C9orf135-207ENST00000529446 ESYT2A0FGR8 921 aa13.54□□□□□ -0.24
C9orf135-207ENST00000529446 STRNO43815 780 aa13.54□□□□□ -0.24
C9orf135-207ENST00000529446 JAK2O60674 1132 aa13.54□□□□□ -0.24
C9orf135-207ENST00000529446 PPP1R11O60927 126 aaPredicted RBP13.54□□□□□ -0.24
C9orf135-207ENST00000529446 HSP90AA1P07900 732 aaKnown RBP13.54□□□□□ -0.24
C9orf135-207ENST00000529446 ALAS1P13196 640 aa13.54□□□□□ -0.24
C9orf135-207ENST00000529446 PDIA4P13667 645 aaKnown RBP13.54□□□□□ -0.24
C9orf135-207ENST00000529446 ERCC3P19447 782 aa13.54□□□□□ -0.24
C9orf135-207ENST00000529446 GHRHRQ02643 423 aa13.54□□□□□ -0.24
C9orf135-207ENST00000529446 KIF22Q14807 665 aa13.54□□□□□ -0.24
C9orf135-207ENST00000529446 Q3C1V9 767 aa13.54□□□□□ -0.24
C9orf135-207ENST00000529446 USH1GQ495M9 461 aa13.54□□□□□ -0.24
C9orf135-207ENST00000529446 WWC2Q6AWC2 1192 aa13.54□□□□□ -0.24
C9orf135-207ENST00000529446 NCAPG2Q86XI2 1143 aa13.54□□□□□ -0.24
C9orf135-207ENST00000529446 PIBF1Q8WXW3 757 aa13.54□□□□□ -0.24
C9orf135-207ENST00000529446 CWC22Q9HCG8 908 aaKnown RBP13.54□□□□□ -0.24
C9orf135-207ENST00000529446 RNF146Q9NTX7 359 aa13.54□□□□□ -0.24
C9orf135-207ENST00000529446 hCG_1642624A0A1W2PR95 340 aa13.53□□□□□ -0.24
C9orf135-207ENST00000529446 STXBP3O00186 592 aa13.53□□□□□ -0.24
C9orf135-207ENST00000529446 FKTNO75072 461 aa13.53□□□□□ -0.24
C9orf135-207ENST00000529446 GNRH1P01148 92 aa13.53□□□□□ -0.24
C9orf135-207ENST00000529446 FDPSP14324 419 aaKnown RBP13.53□□□□□ -0.24
C9orf135-207ENST00000529446 PDCP20941 246 aa13.53□□□□□ -0.24
C9orf135-207ENST00000529446 CALML3P27482 149 aa13.53□□□□□ -0.24
C9orf135-207ENST00000529446 GNA11P29992 359 aa13.53□□□□□ -0.24
C9orf135-207ENST00000529446 NAPAP54920 295 aa13.53□□□□□ -0.24
C9orf135-207ENST00000529446 LACTBP83111 547 aaPredicted RBP13.53□□□□□ -0.24
C9orf135-207ENST00000529446 TRIM29Q14134 588 aa13.53□□□□□ -0.24
C9orf135-207ENST00000529446 MCTP2Q6DN12 878 aa13.53□□□□□ -0.24
C9orf135-207ENST00000529446 GALNT17Q6IS24 598 aa13.53□□□□□ -0.24
C9orf135-207ENST00000529446 BICD2Q8TD16 824 aa13.53□□□□□ -0.24
C9orf135-207ENST00000529446 DDX11Q96FC9 970 aa13.53□□□□□ -0.24
C9orf135-207ENST00000529446 ERO1AQ96HE7 468 aa13.53□□□□□ -0.24
C9orf135-207ENST00000529446 ALG1Q9BT22 464 aa13.53□□□□□ -0.24
C9orf135-207ENST00000529446 R3HDMLQ9H3Y0 253 aa13.53□□□□□ -0.24
C9orf135-207ENST00000529446 IVNS1ABPQ9Y6Y0 642 aa13.53□□□□□ -0.24
C9orf135-207ENST00000529446 PFASO15067 1338 aa13.53□□□□□ -0.24
C9orf135-207ENST00000529446 COL11A1P12107 1806 aaPredicted RBP13.53□□□□□ -0.24
C9orf135-207ENST00000529446 PIK3CDO00329 1044 aa13.52□□□□□ -0.25
C9orf135-207ENST00000529446 FCER1AP12319 257 aa13.52□□□□□ -0.25
C9orf135-207ENST00000529446 MRPL12P52815 198 aaKnown RBP13.52□□□□□ -0.25
C9orf135-207ENST00000529446 FCGRTP55899 365 aa13.52□□□□□ -0.25
C9orf135-207ENST00000529446 KCTD2Q14681 263 aa13.52□□□□□ -0.25
C9orf135-207ENST00000529446 PLEKHH3Q7Z736 793 aa13.52□□□□□ -0.25
C9orf135-207ENST00000529446 CLEC4DQ8WXI8 215 aa13.52□□□□□ -0.25
C9orf135-207ENST00000529446 GPKOWQ92917 476 aaPredicted RBP eCLIP13.52□□□□□ -0.25
C9orf135-207ENST00000529446 CUL5Q93034 780 aa13.52□□□□□ -0.25
C9orf135-207ENST00000529446 COA7Q96BR5 231 aa13.52□□□□□ -0.25
C9orf135-207ENST00000529446 ZMYND12Q9H0C1 365 aa13.52□□□□□ -0.25
C9orf135-207ENST00000529446 PORCNQ9H237 461 aa13.52□□□□□ -0.25
C9orf135-207ENST00000529446 C6orf50Q9HD87 102 aa13.52□□□□□ -0.25
C9orf135-207ENST00000529446 RBM19Q9Y4C8 960 aaKnown RBP13.52□□□□□ -0.25
C9orf135-207ENST00000529446 RIPK3Q9Y572 518 aa13.52□□□□□ -0.25
C9orf135-207ENST00000529446 SLC15A5A6NIM6 579 aa13.51□□□□□ -0.25
C9orf135-207ENST00000529446 PTPREP23469 700 aa13.51□□□□□ -0.25
C9orf135-207ENST00000529446 GJB2P29033 226 aa13.51□□□□□ -0.25
C9orf135-207ENST00000529446 SLC4A3P48751 1232 aa13.51□□□□□ -0.25
C9orf135-207ENST00000529446 WDR78Q5VTH9 848 aa13.51□□□□□ -0.25
C9orf135-207ENST00000529446 GPR142Q7Z601 462 aa13.51□□□□□ -0.25
C9orf135-207ENST00000529446 ANKRD35Q8N283 1001 aa13.51□□□□□ -0.25
C9orf135-207ENST00000529446 SOCS4Q8WXH5 440 aa13.51□□□□□ -0.25
C9orf135-207ENST00000529446 C8orf76Q96K31 380 aa13.51□□□□□ -0.25
C9orf135-207ENST00000529446 MMP19Q99542 508 aa13.51□□□□□ -0.25
C9orf135-207ENST00000529446 PSTPIP2Q9H939 334 aa13.51□□□□□ -0.25
C9orf135-207ENST00000529446 EFCC1Q9HA90 598 aa13.51□□□□□ -0.25
C9orf135-207ENST00000529446 RIC8AQ9NPQ8 531 aa13.51□□□□□ -0.25
C9orf135-207ENST00000529446 HOMER2Q9NSB8 354 aa13.51□□□□□ -0.25
C9orf135-207ENST00000529446 SMCO2A6NFE2 343 aa13.5□□□□□ -0.25
C9orf135-207ENST00000529446 GCOM1H8Y6P7 765 aaPredicted RBP13.5□□□□□ -0.25
C9orf135-207ENST00000529446 NFIBO00712 420 aa13.5□□□□□ -0.25
C9orf135-207ENST00000529446 TNPO2O14787 897 aaKnown RBP13.5□□□□□ -0.25
C9orf135-207ENST00000529446 PEX10O60683 326 aa13.5□□□□□ -0.25
C9orf135-207ENST00000529446 PPFIA3O75145 1194 aa13.5□□□□□ -0.25
C9orf135-207ENST00000529446 POLR2MP0CAP2 368 aa13.5□□□□□ -0.25
C9orf135-207ENST00000529446 HOXD10P28358 340 aa13.5□□□□□ -0.25
C9orf135-207ENST00000529446 CTCFP49711 727 aaPredicted RBP13.5□□□□□ -0.25
C9orf135-207ENST00000529446 ADCY7P51828 1080 aa13.5□□□□□ -0.25
C9orf135-207ENST00000529446 PRMT2P55345 433 aa13.5□□□□□ -0.25
C9orf135-207ENST00000529446 NLRP5P59047 1200 aa13.5□□□□□ -0.25
C9orf135-207ENST00000529446 GRB14Q14449 540 aa13.5□□□□□ -0.25
C9orf135-207ENST00000529446 TYW1BQ6NUM6 668 aa13.5□□□□□ -0.25
C9orf135-207ENST00000529446 PPP4R3CPQ6ZMV5 832 aa13.5□□□□□ -0.25
C9orf135-207ENST00000529446 RNF207Q6ZRF8 634 aa13.5□□□□□ -0.25
C9orf135-207ENST00000529446 DAGLBQ8NCG7 672 aa13.5□□□□□ -0.25
C9orf135-207ENST00000529446 ZNF296Q8WUU4 475 aaPredicted RBP13.5□□□□□ -0.25
C9orf135-207ENST00000529446 BRMS1Q9HCU9 246 aa13.5□□□□□ -0.25
C9orf135-207ENST00000529446 SLC5A4Q9NY91 659 aa13.5□□□□□ -0.25
C9orf135-207ENST00000529446 CYP39A1Q9NYL5 469 aa13.5□□□□□ -0.25
C9orf135-207ENST00000529446 VPS54Q9P1Q0 977 aa13.5□□□□□ -0.25
C9orf135-207ENST00000529446 DAXXQ9UER7 740 aaPredicted RBP13.5□□□□□ -0.25
C9orf135-207ENST00000529446 ZNF236Q9UL36 1845 aa13.5□□□□□ -0.25
C9orf135-207ENST00000529446 LOC102724159A0A0B4J2E5 919 aa13.49□□□□□ -0.25
C9orf135-207ENST00000529446 OPLAHO14841 1288 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms