RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 MTMR7Q9Y216 660 aa7.25□□□□□ -1.25
NUP98-215ENST00000529063 TTC28Q96AY4 2481 aa7.25□□□□□ -1.25
NUP98-215ENST00000529063 SYNRGQ9UMZ2 1314 aa7.25□□□□□ -1.25
NUP98-215ENST00000529063 TMEM265A0A087WTH1 108 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 MYADML2A6NDP7 307 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 CFAP99D6REC4 459 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 MBD4O95243 580 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 BRD1O95696 1058 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 RARBP10826 455 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 FCER1AP12319 257 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 EEF2P13639 858 aaKnown RBP7.24□□□□□ -1.25
NUP98-215ENST00000529063 FOSL2P15408 326 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 CDK8P49336 464 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 FAAP100Q0VG06 881 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 GRIN2CQ14957 1233 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 TTF1Q15361 905 aaPredicted RBP7.24□□□□□ -1.25
NUP98-215ENST00000529063 C12orf60Q5U649 245 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 CCSAPQ6IQ19 270 aaPredicted RBP7.24□□□□□ -1.25
NUP98-215ENST00000529063 C16orf86Q6ZW13 317 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 ERC1Q8IUD2 1116 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 SIRT2Q8IXJ6 389 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 PANK1Q8TE04 598 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.24□□□□□ -1.25
NUP98-215ENST00000529063 RNPC3Q96LT9 517 aaKnown RBP7.24□□□□□ -1.25
NUP98-215ENST00000529063 FGD4Q96M96 766 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 MMP19Q99542 508 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 DNAJC2Q99543 621 aaKnown RBP7.24□□□□□ -1.25
NUP98-215ENST00000529063 TINF2Q9BSI4 451 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 ALG2Q9H553 416 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 ARHGEF10LQ9HCE6 1279 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 NRBP1Q9UHY1 535 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 TBX21Q9UL17 535 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 PPP1R9AQ9ULJ8 1098 aa7.24□□□□□ -1.25
NUP98-215ENST00000529063 XIRP2A4UGR9 3374 aa7.23□□□□□ -1.25
NUP98-215ENST00000529063 DNAJC25-GNG10A0A024R161 153 aa7.23□□□□□ -1.25
NUP98-215ENST00000529063 PALM3A6NDB9 673 aaPredicted RBP7.23□□□□□ -1.25
NUP98-215ENST00000529063 VWA5AO00534 786 aa7.23□□□□□ -1.25
NUP98-215ENST00000529063 PQBP1O60828 265 aaKnown RBP7.23□□□□□ -1.25
NUP98-215ENST00000529063 SLC25A27O95847 323 aa7.23□□□□□ -1.25
NUP98-215ENST00000529063 SNAI1O95863 264 aaPredicted RBP7.23□□□□□ -1.25
NUP98-215ENST00000529063 SLC4A3P48751 1232 aa7.23□□□□□ -1.25
NUP98-215ENST00000529063 ACLYP53396 1101 aa7.23□□□□□ -1.25
NUP98-215ENST00000529063 FAM83BQ5T0W9 1011 aa7.23□□□□□ -1.25
NUP98-215ENST00000529063 ANKRD33Q7Z3H0 272 aa7.23□□□□□ -1.25
NUP98-215ENST00000529063 KLHDC9Q8NEP7 349 aa7.23□□□□□ -1.25
NUP98-215ENST00000529063 NUP88Q99567 741 aaPredicted RBP7.23□□□□□ -1.25
NUP98-215ENST00000529063 PRDM6Q9NQX0 595 aa7.23□□□□□ -1.25
NUP98-215ENST00000529063 SLC5A4Q9NY91 659 aa7.23□□□□□ -1.25
NUP98-215ENST00000529063 DIS3Q9Y2L1 958 aaKnown RBP7.23□□□□□ -1.25
NUP98-215ENST00000529063 RIPK3Q9Y572 518 aa7.23□□□□□ -1.25
NUP98-215ENST00000529063 TACC3Q9Y6A5 838 aa7.23□□□□□ -1.25
NUP98-215ENST00000529063 USP17L12C9JPN9 530 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 USP17L21D6R901 530 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 CTAGE5O15320 804 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 AKR1A1P14550 325 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 RAG1P15918 1043 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 PBX2P40425 430 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 STAT3P40763 770 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 FPGSQ05932 587 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 KCTD2Q14681 263 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 RASIP1Q5U651 963 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 CTR9Q6PD62 1173 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 C16orf59Q7L2K0 433 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 RNF180Q86T96 592 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 EPS8L1Q8TE68 723 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 KIF1BPQ96EK5 621 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 CCDC17Q96LX7 622 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.22□□□□□ -1.255e-8■□□□□ 8.8
NUP98-215ENST00000529063 ZBED2Q9BTP6 218 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 KATNBL1Q9H079 304 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 PUS7LQ9H0K6 701 aaKnown RBP7.22□□□□□ -1.25
NUP98-215ENST00000529063 BOLA2Q9H3K6 86 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 SH2D4AQ9H788 454 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 SCUBE2Q9NQ36 999 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 ATP8A2Q9NTI2 1148 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 PAG1Q9NWQ8 432 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 TRANK1O15050 2925 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 SYNGAP1Q96PV0 1343 aa7.22□□□□□ -1.25
NUP98-215ENST00000529063 IGKV6D-41A0A0C4DH26 115 aa7.21□□□□□ -1.26
NUP98-215ENST00000529063 GRXCR1A8MXD5 290 aa7.21□□□□□ -1.26
NUP98-215ENST00000529063 ATP5JP18859 108 aa7.21□□□□□ -1.26
NUP98-215ENST00000529063 RASA1P20936 1047 aa7.21□□□□□ -1.26
NUP98-215ENST00000529063 CST5P28325 142 aaPredicted RBP7.21□□□□□ -1.26
NUP98-215ENST00000529063 SOX11P35716 441 aa7.21□□□□□ -1.26
NUP98-215ENST00000529063 CDK7P50613 346 aa7.21□□□□□ -1.26
NUP98-215ENST00000529063 FUT2Q10981 343 aa7.21□□□□□ -1.26
NUP98-215ENST00000529063 UBE3CQ15386 1083 aa7.21□□□□□ -1.26
NUP98-215ENST00000529063 KCNA10Q16322 511 aa7.21□□□□□ -1.26
NUP98-215ENST00000529063 TMEM240Q5SV17 173 aa7.21□□□□□ -1.26
NUP98-215ENST00000529063 SNRNP48Q6IEG0 339 aaKnown RBP7.21□□□□□ -1.26
NUP98-215ENST00000529063 MAMDC4Q6UXC1 1216 aa7.21□□□□□ -1.26
NUP98-215ENST00000529063 CLASRPQ8N2M8 674 aaKnown RBP7.21□□□□□ -1.26
NUP98-215ENST00000529063 TOX2Q96NM4 488 aa7.21□□□□□ -1.26
NUP98-215ENST00000529063 HAUS7Q99871 368 aa7.21□□□□□ -1.26
NUP98-215ENST00000529063 TSEN34Q9BSV6 310 aaKnown RBP7.21□□□□□ -1.26
NUP98-215ENST00000529063 UPF3AQ9H1J1 476 aaKnown RBP7.21□□□□□ -1.26
NUP98-215ENST00000529063 KANSL2Q9H9L4 492 aa7.21□□□□□ -1.26
NUP98-215ENST00000529063 EPB41L4AQ9HCS5 686 aaPredicted RBP7.21□□□□□ -1.26
NUP98-215ENST00000529063 STARD7Q9NQZ5 370 aa7.21□□□□□ -1.26
NUP98-215ENST00000529063 TMEM39AQ9NV64 488 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms