RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 SAFBQ15424 915 aaKnown RBP eCLIP28.4■■■□□ 2.14
LDLRAD3-203ENST00000528989 EARS2Q5JPH6 523 aaKnown RBP28.4■■■□□ 2.14
LDLRAD3-203ENST00000528989 TBC1D5Q92609 795 aa28.4■■■□□ 2.14
LDLRAD3-203ENST00000528989 PSTPIP2Q9H939 334 aa28.4■■■□□ 2.14
LDLRAD3-203ENST00000528989 RASSF10A6NK89 507 aa28.39■■■□□ 2.14
LDLRAD3-203ENST00000528989 ALAS1P13196 640 aa28.39■■■□□ 2.14
LDLRAD3-203ENST00000528989 U2AF2P26368 475 aaKnown RBP eCLIP28.39■■■□□ 2.14
LDLRAD3-203ENST00000528989 KRT2P35908 639 aa28.39■■■□□ 2.14
LDLRAD3-203ENST00000528989 BLIDQ8IZY5 108 aa28.39■■■□□ 2.14
LDLRAD3-203ENST00000528989 RGS22Q8NE09 1264 aa28.39■■■□□ 2.14
LDLRAD3-203ENST00000528989 PAGR1Q9BTK6 254 aa28.39■■■□□ 2.14
LDLRAD3-203ENST00000528989 RBPJLQ9UBG7 517 aa28.39■■■□□ 2.14
LDLRAD3-203ENST00000528989 SNRNP48Q6IEG0 339 aaKnown RBP28.38■■■□□ 2.13
LDLRAD3-203ENST00000528989 C6orf50Q9HD87 102 aa28.38■■■□□ 2.13
LDLRAD3-203ENST00000528989 FAM205CA6NFA0 338 aa28.38■■■□□ 2.13
LDLRAD3-203ENST00000528989 M0R2N6 131 aa28.38■■■□□ 2.13
LDLRAD3-203ENST00000528989 AOC2O75106 756 aa28.38■■■□□ 2.13
LDLRAD3-203ENST00000528989 CNMDO75829 334 aa28.38■■■□□ 2.13
LDLRAD3-203ENST00000528989 CALML3P27482 149 aa28.38■■■□□ 2.13
LDLRAD3-203ENST00000528989 GNL2Q13823 731 aaKnown RBP28.38■■■□□ 2.13
LDLRAD3-203ENST00000528989 UBE2SQ16763 222 aa28.38■■■□□ 2.13
LDLRAD3-203ENST00000528989 USP17L6PQ6QN14 398 aa28.38■■■□□ 2.13
LDLRAD3-203ENST00000528989 BIN2Q9UBW5 565 aaPredicted RBP28.38■■■□□ 2.13
LDLRAD3-203ENST00000528989 SLC45A1Q9Y2W3 748 aa28.38■■■□□ 2.13
LDLRAD3-203ENST00000528989 ESYT2A0FGR8 921 aa28.37■■■□□ 2.13
LDLRAD3-203ENST00000528989 ADCY7P51828 1080 aa28.37■■■□□ 2.13
LDLRAD3-203ENST00000528989 Q3C1V9 767 aa28.37■■■□□ 2.13
LDLRAD3-203ENST00000528989 MUM1L1Q5H9M0 696 aa28.37■■■□□ 2.13
LDLRAD3-203ENST00000528989 PPP1R18Q6NYC8 613 aa28.37■■■□□ 2.13
LDLRAD3-203ENST00000528989 TNFRSF25Q93038 417 aa28.37■■■□□ 2.13
LDLRAD3-203ENST00000528989 FOXP1Q9H334 677 aaPredicted RBP28.37■■■□□ 2.13
LDLRAD3-203ENST00000528989 RIC8AQ9NPQ8 531 aa28.37■■■□□ 2.13
LDLRAD3-203ENST00000528989 TMEM260Q9NX78 707 aa28.37■■■□□ 2.13
LDLRAD3-203ENST00000528989 PCDHA6Q9UN73 950 aa28.37■■■□□ 2.13
LDLRAD3-203ENST00000528989 PCDHA8Q9Y5H6 950 aa28.37■■■□□ 2.13
LDLRAD3-203ENST00000528989 GNA11P29992 359 aa28.36■■■□□ 2.13
LDLRAD3-203ENST00000528989 STAT3P40763 770 aa28.36■■■□□ 2.13
LDLRAD3-203ENST00000528989 SMCR8Q8TEV9 937 aaPredicted RBP28.36■■■□□ 2.13
LDLRAD3-203ENST00000528989 CAPNS2Q96L46 248 aa28.36■■■□□ 2.13
LDLRAD3-203ENST00000528989 R3HDMLQ9H3Y0 253 aa28.36■■■□□ 2.13
LDLRAD3-203ENST00000528989 PNMA3Q9UL41 463 aa28.36■■■□□ 2.13
LDLRAD3-203ENST00000528989 NFIBO00712 420 aa28.36■■■□□ 2.13
LDLRAD3-203ENST00000528989 ATP2A1O14983 1001 aa28.36■■■□□ 2.13
LDLRAD3-203ENST00000528989 IFNL1Q8IU54 200 aa28.36■■■□□ 2.13
LDLRAD3-203ENST00000528989 NOSTRINQ8IVI9 506 aa28.36■■■□□ 2.13
LDLRAD3-203ENST00000528989 DAGLBQ8NCG7 672 aa28.36■■■□□ 2.13
LDLRAD3-203ENST00000528989 CLEC4DQ8WXI8 215 aa28.36■■■□□ 2.13
LDLRAD3-203ENST00000528989 TRERF1Q96PN7 1200 aa28.36■■■□□ 2.13
LDLRAD3-203ENST00000528989 ZSCAN16Q9H4T2 348 aaPredicted RBP28.36■■■□□ 2.13
LDLRAD3-203ENST00000528989 COL11A1P12107 1806 aaPredicted RBP28.35■■■□□ 2.13
LDLRAD3-203ENST00000528989 MEIS2O14770 477 aa28.35■■■□□ 2.13
LDLRAD3-203ENST00000528989 HOXA13P31271 388 aaPredicted RBP28.35■■■□□ 2.13
LDLRAD3-203ENST00000528989 OAZ1P54368 228 aa28.35■■■□□ 2.13
LDLRAD3-203ENST00000528989 MB21D1Q8N884 522 aa28.35■■■□□ 2.13
LDLRAD3-203ENST00000528989 CUL5Q93034 780 aa28.35■■■□□ 2.13
LDLRAD3-203ENST00000528989 TEX13BQ9BXU2 312 aa28.35■■■□□ 2.13
LDLRAD3-203ENST00000528989 BRMS1Q9HCU9 246 aa28.35■■■□□ 2.13
LDLRAD3-203ENST00000528989 MRPL11Q9Y3B7 192 aaKnown RBP28.35■■■□□ 2.13
LDLRAD3-203ENST00000528989 JAKMIP3Q5VZ66 844 aa28.34■■■□□ 2.13
LDLRAD3-203ENST00000528989 GALNT17Q6IS24 598 aa28.34■■■□□ 2.13
LDLRAD3-203ENST00000528989 FAM177A1Q8N128 213 aaPredicted RBP28.34■■■□□ 2.13
LDLRAD3-203ENST00000528989 PGBD1Q96JS3 809 aa28.34■■■□□ 2.13
LDLRAD3-203ENST00000528989 ABCB11O95342 1321 aa28.34■■■□□ 2.13
LDLRAD3-203ENST00000528989 MRPL12P52815 198 aaKnown RBP28.34■■■□□ 2.13
LDLRAD3-203ENST00000528989 SPATC1LQ9H0A9 340 aa28.34■■■□□ 2.13
LDLRAD3-203ENST00000528989 CFBP00751 764 aa28.33■■■□□ 2.13
LDLRAD3-203ENST00000528989 INHBEP58166 350 aa28.33■■■□□ 2.13
LDLRAD3-203ENST00000528989 TRAF1Q13077 416 aa28.33■■■□□ 2.13
LDLRAD3-203ENST00000528989 PIK3AP1Q6ZUJ8 805 aa28.33■■■□□ 2.13
LDLRAD3-203ENST00000528989 REXO1Q8N1G1 1221 aaKnown RBP28.33■■■□□ 2.13
LDLRAD3-203ENST00000528989 ANKRD13CQ8N6S4 541 aa28.33■■■□□ 2.13
LDLRAD3-203ENST00000528989 DNM1Q05193 864 aaKnown RBP28.32■■■□□ 2.12
LDLRAD3-203ENST00000528989 RNF146Q9NTX7 359 aa28.32■■■□□ 2.12
LDLRAD3-203ENST00000528989 RABGAP1Q9Y3P9 1069 aa28.32■■■□□ 2.12
LDLRAD3-203ENST00000528989 TM4SF4P48230 202 aa28.32■■■□□ 2.12
LDLRAD3-203ENST00000528989 CLK2P49760 499 aaKnown RBP28.32■■■□□ 2.12
LDLRAD3-203ENST00000528989 NOGQ13253 232 aa28.32■■■□□ 2.12
LDLRAD3-203ENST00000528989 SREBF2Q12772 1141 aa28.31■■■□□ 2.12
LDLRAD3-203ENST00000528989 BRAPQ7Z569 592 aa28.31■■■□□ 2.12
LDLRAD3-203ENST00000528989 BICD2Q8TD16 824 aa28.31■■■□□ 2.12
LDLRAD3-203ENST00000528989 PARK7Q99497 189 aaKnown RBP28.31■■■□□ 2.12
LDLRAD3-203ENST00000528989 MOV10L1Q9BXT6 1211 aaKnown RBP28.31■■■□□ 2.12
LDLRAD3-203ENST00000528989 FTOQ9C0B1 505 aaKnown RBP eCLIP28.31■■■□□ 2.12
LDLRAD3-203ENST00000528989 TFIP11Q9UBB9 837 aaKnown RBP28.31■■■□□ 2.12
LDLRAD3-203ENST00000528989 MYSM1Q5VVJ2 828 aa28.3■■■□□ 2.12
LDLRAD3-203ENST00000528989 NBR1Q14596 966 aa28.29■■■□□ 2.12
LDLRAD3-203ENST00000528989 CEP350Q5VT06 3117 aa28.29■■■□□ 2.12
LDLRAD3-203ENST00000528989 WNT7AO00755 349 aa28.29■■■□□ 2.12
LDLRAD3-203ENST00000528989 ATP2B1P20020 1258 aa28.29■■■□□ 2.12
LDLRAD3-203ENST00000528989 VEGFBP49765 207 aa28.29■■■□□ 2.12
LDLRAD3-203ENST00000528989 TOB1P50616 345 aaPredicted RBP28.29■■■□□ 2.12
LDLRAD3-203ENST00000528989 ERVK-9P63128 1117 aa28.29■■■□□ 2.12
LDLRAD3-203ENST00000528989 ERVK-24P63145 666 aa28.29■■■□□ 2.12
LDLRAD3-203ENST00000528989 TAF1CQ15572 869 aaPredicted RBP28.29■■■□□ 2.12
LDLRAD3-203ENST00000528989 FCHSD1Q86WN1 690 aa28.29■■■□□ 2.12
LDLRAD3-203ENST00000528989 RIOX2Q8IUF8 465 aa28.29■■■□□ 2.12
LDLRAD3-203ENST00000528989 CEBPZQ03701 1054 aaKnown RBP28.28■■■□□ 2.12
LDLRAD3-203ENST00000528989 NCAPG2Q86XI2 1143 aa28.28■■■□□ 2.12
LDLRAD3-203ENST00000528989 PNMA2Q9UL42 364 aa28.28■■■□□ 2.12
LDLRAD3-203ENST00000528989 A0A0G2JMZ2 1700 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms