RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 SNRNP48Q6IEG0 339 aaKnown RBP14.01□□□□□ -0.17
TRAF3IP2-211ENST00000528599 ZSWIM8A7E2V4 1837 aa14.01□□□□□ -0.17
TRAF3IP2-211ENST00000528599 ALDH1A1P00352 501 aa14.01□□□□□ -0.17
TRAF3IP2-211ENST00000528599 STAT3P40763 770 aa14.01□□□□□ -0.17
TRAF3IP2-211ENST00000528599 GCLCP48506 637 aaPredicted RBP14.01□□□□□ -0.17
TRAF3IP2-211ENST00000528599 GUCY1B3Q02153 619 aa14.01□□□□□ -0.17
TRAF3IP2-211ENST00000528599 LARP1BQ659C4 914 aaKnown RBP14.01□□□□□ -0.17
TRAF3IP2-211ENST00000528599 ANKRD13CQ8N6S4 541 aa14.01□□□□□ -0.17
TRAF3IP2-211ENST00000528599 GTF3C2Q8WUA4 911 aaPredicted RBP14.01□□□□□ -0.17
TRAF3IP2-211ENST00000528599 C8orf76Q96K31 380 aa14.01□□□□□ -0.17
TRAF3IP2-211ENST00000528599 TEX13BQ9BXU2 312 aa14.01□□□□□ -0.17
TRAF3IP2-211ENST00000528599 SPATC1LQ9H0A9 340 aa14.01□□□□□ -0.17
TRAF3IP2-211ENST00000528599 CWC22Q9HCG8 908 aaKnown RBP14.01□□□□□ -0.17
TRAF3IP2-211ENST00000528599 KCNJ14Q9UNX9 436 aa14.01□□□□□ -0.17
TRAF3IP2-211ENST00000528599 KIF3AQ9Y496 699 aa14.01□□□□□ -0.17
TRAF3IP2-211ENST00000528599 hCG_1984214I3L0E3 225 aa14□□□□□ -0.17
TRAF3IP2-211ENST00000528599 OPLAHO14841 1288 aa14□□□□□ -0.17
TRAF3IP2-211ENST00000528599 ADAMTS3O15072 1205 aa14□□□□□ -0.17
TRAF3IP2-211ENST00000528599 ALAS1P13196 640 aa14□□□□□ -0.17
TRAF3IP2-211ENST00000528599 SYT1P21579 422 aa14□□□□□ -0.17
TRAF3IP2-211ENST00000528599 DDIT3P35638 169 aa14□□□□□ -0.17
TRAF3IP2-211ENST00000528599 NAPAP54920 295 aa14□□□□□ -0.17
TRAF3IP2-211ENST00000528599 ERVK-9P63128 1117 aa14□□□□□ -0.17
TRAF3IP2-211ENST00000528599 ERVK-24P63145 666 aa14□□□□□ -0.17
TRAF3IP2-211ENST00000528599 ZNF713Q8N859 430 aaPredicted RBP14□□□□□ -0.17
TRAF3IP2-211ENST00000528599 FBXO18Q8NFZ0 1043 aa14□□□□□ -0.17
TRAF3IP2-211ENST00000528599 ZNF296Q8WUU4 475 aaPredicted RBP14□□□□□ -0.17
TRAF3IP2-211ENST00000528599 ZFYVE28Q9HCC9 887 aa14□□□□□ -0.17
TRAF3IP2-211ENST00000528599 SH3GLB2Q9NR46 395 aa14□□□□□ -0.17
TRAF3IP2-211ENST00000528599 MORF4L1Q9UBU8 362 aa14□□□□□ -0.17
TRAF3IP2-211ENST00000528599 CPA4Q9UI42 421 aa14□□□□□ -0.17
TRAF3IP2-211ENST00000528599 GPR25O00155 361 aa13.99□□□□□ -0.17
TRAF3IP2-211ENST00000528599 TLR2O60603 784 aa13.99□□□□□ -0.17
TRAF3IP2-211ENST00000528599 BCRP11274 1271 aa13.99□□□□□ -0.17
TRAF3IP2-211ENST00000528599 MUM1L1Q5H9M0 696 aa13.99□□□□□ -0.17
TRAF3IP2-211ENST00000528599 KRT40Q6A162 431 aa13.99□□□□□ -0.17
TRAF3IP2-211ENST00000528599 RIOX2Q8IUF8 465 aa13.99□□□□□ -0.17
TRAF3IP2-211ENST00000528599 CLEC4DQ8WXI8 215 aa13.99□□□□□ -0.17
TRAF3IP2-211ENST00000528599 PHF20Q9BVI0 1012 aa13.99□□□□□ -0.17
TRAF3IP2-211ENST00000528599 MOV10L1Q9BXT6 1211 aaKnown RBP13.99□□□□□ -0.17
TRAF3IP2-211ENST00000528599 HOMER2Q9NSB8 354 aa13.99□□□□□ -0.17
TRAF3IP2-211ENST00000528599 ABCB11O95342 1321 aa13.99□□□□□ -0.17
TRAF3IP2-211ENST00000528599 PDCP20941 246 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 TRAF1Q13077 416 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 NPY5RQ15761 445 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 PPP1R18Q6NYC8 613 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 C17orf99Q6UX52 265 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 GPRC5AQ8NFJ5 357 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 TBC1D5Q92609 795 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 TRERF1Q96PN7 1200 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 ZMYND12Q9H0C1 365 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 PRDM10Q9NQV6 1147 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 RNF146Q9NTX7 359 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 PNMA2Q9UL42 364 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 MRPL11Q9Y3B7 192 aaKnown RBP13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 SMCO2A6NFE2 343 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 NFIBO00712 420 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 XBP1P17861 261 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 NLRP5P59047 1200 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 PKP1Q13835 747 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 TRIM29Q14134 588 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 FAM110CQ1W6H9 321 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 CCDC148Q8NFR7 591 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 CCDC12Q8WUD4 166 aaPredicted RBP13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 PORCNQ9H237 461 aa13.98□□□□□ -0.17
TRAF3IP2-211ENST00000528599 ESYT2A0FGR8 921 aa13.97□□□□□ -0.17
TRAF3IP2-211ENST00000528599 MMP1P03956 469 aa13.97□□□□□ -0.17
TRAF3IP2-211ENST00000528599 ERCC3P19447 782 aa13.97□□□□□ -0.17
TRAF3IP2-211ENST00000528599 TKFCQ3LXA3 575 aa13.97□□□□□ -0.17
TRAF3IP2-211ENST00000528599 FAM177A1Q8N128 213 aaPredicted RBP13.97□□□□□ -0.17
TRAF3IP2-211ENST00000528599 RIC8AQ9NPQ8 531 aa13.97□□□□□ -0.17
TRAF3IP2-211ENST00000528599 MTMR6Q9Y217 621 aa13.97□□□□□ -0.17
TRAF3IP2-211ENST00000528599 VPS37CA5D8V6 355 aaPredicted RBP13.96□□□□□ -0.17
TRAF3IP2-211ENST00000528599 H3BQV1 296 aa13.96□□□□□ -0.17
TRAF3IP2-211ENST00000528599 STX6O43752 255 aa13.96□□□□□ -0.17
TRAF3IP2-211ENST00000528599 SLC25A27O95847 323 aa13.96□□□□□ -0.17
TRAF3IP2-211ENST00000528599 CTGFP29279 349 aa13.96□□□□□ -0.17
TRAF3IP2-211ENST00000528599 ADCY7P51828 1080 aa13.96□□□□□ -0.17
TRAF3IP2-211ENST00000528599 NOM1Q5C9Z4 860 aaKnown RBP13.96□□□□□ -0.17
TRAF3IP2-211ENST00000528599 NCAPG2Q86XI2 1143 aa13.96□□□□□ -0.17
TRAF3IP2-211ENST00000528599 OXER1Q8TDS5 423 aa13.96□□□□□ -0.17
TRAF3IP2-211ENST00000528599 PSTPIP2Q9H939 334 aa13.96□□□□□ -0.17
TRAF3IP2-211ENST00000528599 EFCC1Q9HA90 598 aa13.96□□□□□ -0.17
TRAF3IP2-211ENST00000528599 C6orf50Q9HD87 102 aa13.96□□□□□ -0.17
TRAF3IP2-211ENST00000528599 PCDHA4Q9UN74 947 aa13.96□□□□□ -0.17
TRAF3IP2-211ENST00000528599 MEIS2O14770 477 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 CALML3P27482 149 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 CCNA1P78396 465 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 UBE2SQ16763 222 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 USP17L6PQ6QN14 398 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 BLIDQ8IZY5 108 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 DAGLBQ8NCG7 672 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 RGS22Q8NE09 1264 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 SHCBP1Q8NEM2 672 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 CHST13Q8NET6 341 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 CUL5Q93034 780 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 ACAD9Q9H845 621 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 ZDHHC9Q9Y397 364 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 MKI67P46013 3256 aaKnown RBP13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 BTBD18B2RXH4 712 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms