RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 SPDYE2Q495Y8 402 aa16.68■□□□□ 0.26
ECHDC1-220ENST00000528402 ZNF658Q5TYW1 1059 aaPredicted RBP16.68■□□□□ 0.26
ECHDC1-220ENST00000528402 TTBK2Q6IQ55 1244 aa16.68■□□□□ 0.26
ECHDC1-220ENST00000528402 BTNL9Q6UXG8 535 aa16.68■□□□□ 0.26
ECHDC1-220ENST00000528402 RASGRP2Q7LDG7 609 aa16.68■□□□□ 0.26
ECHDC1-220ENST00000528402 GRAMD1CQ8IYS0 662 aa16.68■□□□□ 0.26
ECHDC1-220ENST00000528402 CACTINQ8WUQ7 758 aaKnown RBP16.68■□□□□ 0.26
ECHDC1-220ENST00000528402 NFE2L3Q9Y4A8 694 aa16.68■□□□□ 0.26
ECHDC1-220ENST00000528402 USP17L10C9JJH3 530 aa16.67■□□□□ 0.26
ECHDC1-220ENST00000528402 RAD17O75943 681 aa16.67■□□□□ 0.26
ECHDC1-220ENST00000528402 ZNF18P17022 549 aa16.67■□□□□ 0.26
ECHDC1-220ENST00000528402 USP11P51784 963 aa16.67■□□□□ 0.26
ECHDC1-220ENST00000528402 AP3B2Q13367 1082 aa16.67■□□□□ 0.26
ECHDC1-220ENST00000528402 CALCRLQ16602 461 aa16.67■□□□□ 0.26
ECHDC1-220ENST00000528402 CCDC144BQ3MJ40 725 aa16.67■□□□□ 0.26
ECHDC1-220ENST00000528402 DALRD3Q5D0E6 543 aaKnown RBP16.67■□□□□ 0.26
ECHDC1-220ENST00000528402 MOXD1Q6UVY6 613 aa16.67■□□□□ 0.26
ECHDC1-220ENST00000528402 CABP7Q86V35 215 aa16.67■□□□□ 0.26
ECHDC1-220ENST00000528402 SIAH1Q8IUQ4 282 aa16.67■□□□□ 0.26
ECHDC1-220ENST00000528402 RASSF8Q8NHQ8 419 aa16.67■□□□□ 0.26
ECHDC1-220ENST00000528402 CALML4Q96GE6 196 aa16.67■□□□□ 0.26
ECHDC1-220ENST00000528402 MTMR9Q96QG7 549 aa16.67■□□□□ 0.26
ECHDC1-220ENST00000528402 CTAGE1Q96RT6 745 aa16.67■□□□□ 0.26
ECHDC1-220ENST00000528402 LRRC27Q9C0I9 530 aa16.67■□□□□ 0.26
ECHDC1-220ENST00000528402 ZNF277Q9NRM2 450 aaPredicted RBP16.67■□□□□ 0.26
ECHDC1-220ENST00000528402 KCND1Q9NSA2 647 aa16.67■□□□□ 0.26
ECHDC1-220ENST00000528402 KBTBD4Q9NVX7 518 aa16.67■□□□□ 0.26
ECHDC1-220ENST00000528402 FOSP01100 380 aaPredicted RBP16.66■□□□□ 0.26
ECHDC1-220ENST00000528402 RPN1P04843 607 aaKnown RBP16.66■□□□□ 0.26
ECHDC1-220ENST00000528402 BMP3P12645 472 aa16.66■□□□□ 0.26
ECHDC1-220ENST00000528402 KCNJ6P48051 423 aa16.66■□□□□ 0.26
ECHDC1-220ENST00000528402 KCTD1Q719H9 257 aa16.66■□□□□ 0.26
ECHDC1-220ENST00000528402 CLEC10AQ8IUN9 316 aa16.66■□□□□ 0.26
ECHDC1-220ENST00000528402 IGSF22Q8N9C0 903 aa16.66■□□□□ 0.26
ECHDC1-220ENST00000528402 JDP2Q8WYK2 163 aa16.66■□□□□ 0.26
ECHDC1-220ENST00000528402 AMNQ9BXJ7 453 aa16.66■□□□□ 0.26
ECHDC1-220ENST00000528402 MTFR1LQ9H019 292 aa16.66■□□□□ 0.26
ECHDC1-220ENST00000528402 ARFGEF1Q9Y6D6 1849 aa16.66■□□□□ 0.26
ECHDC1-220ENST00000528402 GH2P01242 217 aa16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 RPS12P25398 132 aaKnown RBP16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 TNNI2P48788 182 aa16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 SPAG1Q07617 926 aa16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 CUL4BQ13620 913 aa16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 KARSQ15046 597 aaKnown RBP16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 QRICH1Q2TAL8 776 aa16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 DNTTIP2Q5QJE6 756 aaKnown RBP16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 CIAPIN1Q6FI81 312 aa16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 TMC6Q7Z403 805 aa16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 FILIP1Q7Z7B0 1213 aa16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 CCDC112Q8NEF3 446 aa16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 PDGFDQ9GZP0 370 aaPredicted RBP16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 SH2D4AQ9H788 454 aa16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 GOPCQ9HD26 462 aa16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 GINM1Q9NU53 330 aa16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 STK17AQ9UEE5 414 aa16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 RWDD2AQ9UIY3 292 aa16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 PYCARDQ9ULZ3 195 aa16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 ATF5Q9Y2D1 282 aaPredicted RBP16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 PCDHA1Q9Y5I3 950 aa16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 STK24Q9Y6E0 443 aa16.65■□□□□ 0.26
ECHDC1-220ENST00000528402 PPP1R3GB7ZBB8 358 aa16.64■□□□□ 0.25
ECHDC1-220ENST00000528402 TCP10L2B9ZVM9 353 aa16.64■□□□□ 0.25
ECHDC1-220ENST00000528402 PLA2G6O60733 806 aa16.64■□□□□ 0.25
ECHDC1-220ENST00000528402 PPP1R11O60927 126 aaPredicted RBP16.64■□□□□ 0.25
ECHDC1-220ENST00000528402 TPM2P07951 284 aa16.64■□□□□ 0.25
ECHDC1-220ENST00000528402 SFPQP23246 707 aaKnown RBP eCLIP16.64■□□□□ 0.25
ECHDC1-220ENST00000528402 SLC16A2P36021 539 aa16.64■□□□□ 0.25
ECHDC1-220ENST00000528402 STIM1Q13586 685 aa16.64■□□□□ 0.25
ECHDC1-220ENST00000528402 CDC37Q16543 378 aaPredicted RBP16.64■□□□□ 0.25
ECHDC1-220ENST00000528402 SYDE2Q5VT97 1194 aa16.64■□□□□ 0.25
ECHDC1-220ENST00000528402 VSTM4Q8IW00 320 aa16.64■□□□□ 0.25
ECHDC1-220ENST00000528402 ZBED3Q96IU2 234 aaPredicted RBP16.64■□□□□ 0.25
ECHDC1-220ENST00000528402 PRIMPOLQ96LW4 560 aa16.64■□□□□ 0.25
ECHDC1-220ENST00000528402 NAP1L5Q96NT1 182 aaPredicted RBP16.64■□□□□ 0.25
ECHDC1-220ENST00000528402 TAOK3Q9H2K8 898 aa16.64■□□□□ 0.25
ECHDC1-220ENST00000528402 TMEM260Q9NX78 707 aa16.64■□□□□ 0.25
ECHDC1-220ENST00000528402 TMX2Q9Y320 296 aa16.64■□□□□ 0.25
ECHDC1-220ENST00000528402 FAM196BA6NMK8 535 aa16.63■□□□□ 0.25
ECHDC1-220ENST00000528402 GDF11O95390 407 aa16.63■□□□□ 0.25
ECHDC1-220ENST00000528402 NDUFB10O96000 172 aa16.63■□□□□ 0.25
ECHDC1-220ENST00000528402 SKILP12757 684 aa16.63■□□□□ 0.25
ECHDC1-220ENST00000528402 ATP1A3P13637 1013 aa16.63■□□□□ 0.25
ECHDC1-220ENST00000528402 MAP3K10Q02779 954 aa16.63■□□□□ 0.25
ECHDC1-220ENST00000528402 FMR1Q06787 632 aaKnown RBP eCLIP16.63■□□□□ 0.25
ECHDC1-220ENST00000528402 FILIP1LQ4L180 1135 aa16.63■□□□□ 0.25
ECHDC1-220ENST00000528402 NAALADL2Q58DX5 795 aa16.63■□□□□ 0.25
ECHDC1-220ENST00000528402 FBXO11Q86XK2 927 aa16.63■□□□□ 0.25
ECHDC1-220ENST00000528402 ANKRD20A12PQ8NF67 263 aa16.63■□□□□ 0.25
ECHDC1-220ENST00000528402 C7orf25Q9BPX7 421 aa16.63■□□□□ 0.25
ECHDC1-220ENST00000528402 LRWD1Q9UFC0 647 aa16.63■□□□□ 0.25
ECHDC1-220ENST00000528402 SYNRGQ9UMZ2 1314 aa16.63■□□□□ 0.25
ECHDC1-220ENST00000528402 CYP3A7-CYP3A51PA0A087WV96 503 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 H7C1D1 291 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 CCP110O43303 1012 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 RHOBTB3O94955 611 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 TUBB4AP04350 444 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 CYP3A7P24462 503 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 TECP42680 631 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 CXCL9Q07325 125 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 TPD52L1Q16890 204 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms