RNA–Protein interactions for RNA: ENST00000528324.5

CMTM1-209, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-209ENST00000528324 DEXIO95424 95 aa16.26■□□□□ 0.19
CMTM1-209ENST00000528324 XBP1P17861 261 aa16.26■□□□□ 0.19
CMTM1-209ENST00000528324 FUT2Q10981 343 aa16.26■□□□□ 0.19
CMTM1-209ENST00000528324 NTRK3Q16288 839 aa16.26■□□□□ 0.19
CMTM1-209ENST00000528324 SOCS4Q8WXH5 440 aa16.26■□□□□ 0.19
CMTM1-209ENST00000528324 TMX3Q96JJ7 454 aa16.26■□□□□ 0.19
CMTM1-209ENST00000528324 GLT8D2Q9H1C3 349 aa16.26■□□□□ 0.19
CMTM1-209ENST00000528324 HOMER2Q9NSB8 354 aa16.26■□□□□ 0.19
CMTM1-209ENST00000528324 KIF3AQ9Y496 699 aa16.26■□□□□ 0.19
CMTM1-209ENST00000528324 PFASO15067 1338 aa16.25■□□□□ 0.19
CMTM1-209ENST00000528324 STK36Q9NRP7 1315 aa16.25■□□□□ 0.19
CMTM1-209ENST00000528324 SLC15A5A6NIM6 579 aa16.25■□□□□ 0.19
CMTM1-209ENST00000528324 SCG2P13521 617 aa16.25■□□□□ 0.19
CMTM1-209ENST00000528324 LBX1P52954 281 aa16.25■□□□□ 0.19
CMTM1-209ENST00000528324 PRMT2P55345 433 aa16.25■□□□□ 0.19
CMTM1-209ENST00000528324 HMGN5P82970 282 aaKnown RBP16.25■□□□□ 0.19
CMTM1-209ENST00000528324 PFKFB3Q16875 520 aaPredicted RBP16.25■□□□□ 0.19
CMTM1-209ENST00000528324 PPP1R18Q6NYC8 613 aa16.25■□□□□ 0.19
CMTM1-209ENST00000528324 HEATR3Q7Z4Q2 680 aa16.25■□□□□ 0.19
CMTM1-209ENST00000528324 GPR142Q7Z601 462 aa16.25■□□□□ 0.19
CMTM1-209ENST00000528324 TEX2Q8IWB9 1127 aa16.25■□□□□ 0.19
CMTM1-209ENST00000528324 CCDC83Q8IWF9 413 aa16.25■□□□□ 0.19
CMTM1-209ENST00000528324 FAM177A1Q8N128 213 aaPredicted RBP16.25■□□□□ 0.19
CMTM1-209ENST00000528324 ANKRD35Q8N283 1001 aa16.25■□□□□ 0.19
CMTM1-209ENST00000528324 SAMD3Q8N6K7 520 aa16.25■□□□□ 0.19
CMTM1-209ENST00000528324 CD99L2Q8TCZ2 262 aa16.25■□□□□ 0.19
CMTM1-209ENST00000528324 PHKBQ93100 1093 aa16.25■□□□□ 0.19
CMTM1-209ENST00000528324 DDX11Q96FC9 970 aa16.25■□□□□ 0.19
CMTM1-209ENST00000528324 MMP19Q99542 508 aa16.25■□□□□ 0.19
CMTM1-209ENST00000528324 PORCNQ9H237 461 aa16.25■□□□□ 0.19
CMTM1-209ENST00000528324 EFCC1Q9HA90 598 aa16.25■□□□□ 0.19
CMTM1-209ENST00000528324 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.25■□□□□ 0.19
CMTM1-209ENST00000528324 PEX10O60683 326 aa16.24■□□□□ 0.19
CMTM1-209ENST00000528324 LARGE1O95461 756 aa16.24■□□□□ 0.19
CMTM1-209ENST00000528324 SLC35G1Q2M3R5 365 aa16.24■□□□□ 0.19
CMTM1-209ENST00000528324 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.24■□□□□ 0.19
CMTM1-209ENST00000528324 RGS22Q8NE09 1264 aa16.24■□□□□ 0.19
CMTM1-209ENST00000528324 CCDC148Q8NFR7 591 aa16.24■□□□□ 0.19
CMTM1-209ENST00000528324 NUDT12Q9BQG2 462 aa16.24■□□□□ 0.19
CMTM1-209ENST00000528324 MAP3K20Q9NYL2 800 aaKnown RBP16.24■□□□□ 0.19
CMTM1-209ENST00000528324 RIPK3Q9Y572 518 aa16.24■□□□□ 0.19
CMTM1-209ENST00000528324 MGAMO43451 1857 aa16.24■□□□□ 0.19
CMTM1-209ENST00000528324 hCG_1642624A0A1W2PR95 340 aa16.23■□□□□ 0.19
CMTM1-209ENST00000528324 K7ELQ4 463 aaPredicted RBP16.23■□□□□ 0.19
CMTM1-209ENST00000528324 PTPREP23469 700 aa16.23■□□□□ 0.19
CMTM1-209ENST00000528324 NAPAP54920 295 aa16.23■□□□□ 0.19
CMTM1-209ENST00000528324 BECN1Q14457 450 aa16.23■□□□□ 0.19
CMTM1-209ENST00000528324 CUL5Q93034 780 aa16.23■□□□□ 0.19
CMTM1-209ENST00000528324 TRIM47Q96LD4 638 aa16.23■□□□□ 0.19
CMTM1-209ENST00000528324 PRDM10Q9NQV6 1147 aa16.23■□□□□ 0.19
CMTM1-209ENST00000528324 SH3GLB2Q9NR46 395 aa16.23■□□□□ 0.19
CMTM1-209ENST00000528324 BARHL2Q9NY43 387 aa16.23■□□□□ 0.19
CMTM1-209ENST00000528324 ORC3Q9UBD5 711 aaPredicted RBP16.23■□□□□ 0.19
CMTM1-209ENST00000528324 CASP8AP2Q9UKL3 1982 aa16.23■□□□□ 0.19
CMTM1-209ENST00000528324 PTPDC1A2A3K4 754 aa16.22■□□□□ 0.19
CMTM1-209ENST00000528324 CD2BP2O95400 341 aaKnown RBP16.22■□□□□ 0.19
CMTM1-209ENST00000528324 HSP90AA1P07900 732 aaKnown RBP16.22■□□□□ 0.19
CMTM1-209ENST00000528324 RGS2P41220 211 aa16.22■□□□□ 0.19
CMTM1-209ENST00000528324 MRPL12P52815 198 aaKnown RBP16.22■□□□□ 0.19
CMTM1-209ENST00000528324 TRIM29Q14134 588 aa16.22■□□□□ 0.19
CMTM1-209ENST00000528324 GRB14Q14449 540 aa16.22■□□□□ 0.19
CMTM1-209ENST00000528324 NSMFQ6X4W1 530 aa16.22■□□□□ 0.19
CMTM1-209ENST00000528324 DPP9Q86TI2 863 aa16.22■□□□□ 0.19
CMTM1-209ENST00000528324 FAM184AQ8NB25 1140 aa16.22■□□□□ 0.19
CMTM1-209ENST00000528324 NSUN7Q8NE18 718 aaKnown RBP16.22■□□□□ 0.19
CMTM1-209ENST00000528324 MPHOSPH6Q99547 160 aaKnown RBP16.22■□□□□ 0.19
CMTM1-209ENST00000528324 DOCK3Q8IZD9 2030 aa16.22■□□□□ 0.19
CMTM1-209ENST00000528324 SMCHD1A6NHR9 2005 aa16.21■□□□□ 0.19
CMTM1-209ENST00000528324 B4DLN1 442 aa16.21■□□□□ 0.19
CMTM1-209ENST00000528324 GCOM1H8Y6P7 765 aaPredicted RBP16.21■□□□□ 0.19
CMTM1-209ENST00000528324 PPP1R11O60927 126 aaPredicted RBP16.21■□□□□ 0.19
CMTM1-209ENST00000528324 ECM2O94769 699 aaPredicted RBP16.21■□□□□ 0.19
CMTM1-209ENST00000528324 POLR2MP0CAP2 368 aa16.21■□□□□ 0.19
CMTM1-209ENST00000528324 ADORA2AP29274 412 aa16.21■□□□□ 0.19
CMTM1-209ENST00000528324 GNA11P29992 359 aa16.21■□□□□ 0.19
CMTM1-209ENST00000528324 RNF207Q6ZRF8 634 aa16.21■□□□□ 0.19
CMTM1-209ENST00000528324 TRMT44Q8IYL2 757 aaKnown RBP16.21■□□□□ 0.19
CMTM1-209ENST00000528324 BICD2Q8TD16 824 aa16.21■□□□□ 0.19
CMTM1-209ENST00000528324 ARHGAP39Q9C0H5 1083 aa16.21■□□□□ 0.19
CMTM1-209ENST00000528324 PSTPIP2Q9H939 334 aa16.21■□□□□ 0.19
CMTM1-209ENST00000528324 C6orf50Q9HD87 102 aa16.21■□□□□ 0.19
CMTM1-209ENST00000528324 SRRDQ9UH36 339 aa16.21■□□□□ 0.19
CMTM1-209ENST00000528324 TRIM17Q9Y577 477 aa16.21■□□□□ 0.19
CMTM1-209ENST00000528324 PLXNB2O15031 1838 aa16.2■□□□□ 0.18
CMTM1-209ENST00000528324 ZNFX1Q9P2E3 1918 aaKnown RBP16.2■□□□□ 0.18
CMTM1-209ENST00000528324 POTEB2H3BUK9 544 aa16.2■□□□□ 0.18
CMTM1-209ENST00000528324 CTDNEP1O95476 244 aa16.2■□□□□ 0.18
CMTM1-209ENST00000528324 CALML3P27482 149 aa16.2■□□□□ 0.18
CMTM1-209ENST00000528324 MAP2K5Q13163 448 aa16.2■□□□□ 0.18
CMTM1-209ENST00000528324 PKN2Q16513 984 aaKnown RBP16.2■□□□□ 0.18
CMTM1-209ENST00000528324 MUM1L1Q5H9M0 696 aa16.2■□□□□ 0.18
CMTM1-209ENST00000528324 MORN1Q5T089 497 aa16.2■□□□□ 0.18
CMTM1-209ENST00000528324 WWC2Q6AWC2 1192 aa16.2■□□□□ 0.18
CMTM1-209ENST00000528324 MCTP2Q6DN12 878 aa16.2■□□□□ 0.18
CMTM1-209ENST00000528324 GALNT17Q6IS24 598 aa16.2■□□□□ 0.18
CMTM1-209ENST00000528324 CTU1Q7Z7A3 348 aaKnown RBP16.2■□□□□ 0.18
CMTM1-209ENST00000528324 RAET1EQ8TD07 263 aa16.2■□□□□ 0.18
CMTM1-209ENST00000528324 CLEC4DQ8WXI8 215 aa16.2■□□□□ 0.18
CMTM1-209ENST00000528324 GPKOWQ92917 476 aaPredicted RBP eCLIP16.2■□□□□ 0.18
CMTM1-209ENST00000528324 A1CFQ9NQ94 594 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms