RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 EIF5BO60841 1220 aaKnown RBP14.96□□□□□ -0.01
SCN3B-205ENST00000528267 RCAN1P53805 252 aa14.96□□□□□ -0.01
SCN3B-205ENST00000528267 FGD1P98174 961 aa14.96□□□□□ -0.01
SCN3B-205ENST00000528267 MAP2K5Q13163 448 aa14.96□□□□□ -0.01
SCN3B-205ENST00000528267 NTRK3Q16288 839 aa14.96□□□□□ -0.01
SCN3B-205ENST00000528267 CCDC82Q8N4S0 544 aa14.96□□□□□ -0.01
SCN3B-205ENST00000528267 TBC1D5Q92609 795 aa14.96□□□□□ -0.01
SCN3B-205ENST00000528267 MMP19Q99542 508 aa14.96□□□□□ -0.01
SCN3B-205ENST00000528267 NUDT12Q9BQG2 462 aa14.96□□□□□ -0.01
SCN3B-205ENST00000528267 DDX49Q9Y6V7 483 aaKnown RBP14.96□□□□□ -0.01
SCN3B-205ENST00000528267 FRMPD3Q5JV73 1810 aa14.96□□□□□ -0.01
SCN3B-205ENST00000528267 DHX16O60231 1041 aaKnown RBP14.95□□□□□ -0.02
SCN3B-205ENST00000528267 PPFIA3O75145 1194 aa14.95□□□□□ -0.02
SCN3B-205ENST00000528267 CD2BP2O95400 341 aaKnown RBP14.95□□□□□ -0.02
SCN3B-205ENST00000528267 HOXC6P09630 235 aa14.95□□□□□ -0.02
SCN3B-205ENST00000528267 KIF5BP33176 963 aa14.95□□□□□ -0.02
SCN3B-205ENST00000528267 METAP2P50579 478 aaKnown RBP eCLIP14.95□□□□□ -0.02
SCN3B-205ENST00000528267 NEK4P51957 841 aa14.95□□□□□ -0.02
SCN3B-205ENST00000528267 PRMT2P55345 433 aa14.95□□□□□ -0.02
SCN3B-205ENST00000528267 CCT2P78371 535 aaKnown RBP14.95□□□□□ -0.02
SCN3B-205ENST00000528267 PKN2Q16513 984 aaKnown RBP14.95□□□□□ -0.02
SCN3B-205ENST00000528267 ZNF792Q3KQV3 632 aa14.95□□□□□ -0.02
SCN3B-205ENST00000528267 SLC30A10Q6XR72 485 aa14.95□□□□□ -0.02
SCN3B-205ENST00000528267 NOL8Q76FK4 1167 aaKnown RBP14.95□□□□□ -0.02
SCN3B-205ENST00000528267 ABRAQ8N0Z2 381 aa14.95□□□□□ -0.02
SCN3B-205ENST00000528267 CHST13Q8NET6 341 aa14.95□□□□□ -0.02
SCN3B-205ENST00000528267 SOCS4Q8WXH5 440 aa14.95□□□□□ -0.02
SCN3B-205ENST00000528267 SHISA4Q96DD7 197 aa14.95□□□□□ -0.02
SCN3B-205ENST00000528267 APBA2Q99767 749 aa14.95□□□□□ -0.02
SCN3B-205ENST00000528267 ACAD9Q9H845 621 aa14.95□□□□□ -0.02
SCN3B-205ENST00000528267 NAP1L2Q9ULW6 460 aaPredicted RBP14.95□□□□□ -0.02
SCN3B-205ENST00000528267 CTDP1Q9Y5B0 961 aaPredicted RBP14.95□□□□□ -0.02
SCN3B-205ENST00000528267 ADCY3O60266 1144 aa14.94□□□□□ -0.02
SCN3B-205ENST00000528267 FCER1AP12319 257 aa14.94□□□□□ -0.02
SCN3B-205ENST00000528267 HOXD10P28358 340 aa14.94□□□□□ -0.02
SCN3B-205ENST00000528267 SMARCA1P28370 1054 aa14.94□□□□□ -0.02
SCN3B-205ENST00000528267 COPB2P35606 906 aa14.94□□□□□ -0.02
SCN3B-205ENST00000528267 RGS2P41220 211 aa14.94□□□□□ -0.02
SCN3B-205ENST00000528267 CNTN2Q02246 1040 aa14.94□□□□□ -0.02
SCN3B-205ENST00000528267 SCRN1Q12765 414 aa14.94□□□□□ -0.02
SCN3B-205ENST00000528267 STK3Q13188 491 aa14.94□□□□□ -0.02
SCN3B-205ENST00000528267 TKFCQ3LXA3 575 aa14.94□□□□□ -0.02
SCN3B-205ENST00000528267 TYW1BQ6NUM6 668 aa14.94□□□□□ -0.02
SCN3B-205ENST00000528267 FBXO11Q86XK2 927 aa14.94□□□□□ -0.02
SCN3B-205ENST00000528267 CCAR1Q8IX12 1150 aaKnown RBP14.94□□□□□ -0.02
SCN3B-205ENST00000528267 RAET1EQ8TD07 263 aa14.94□□□□□ -0.02
SCN3B-205ENST00000528267 RBM28Q9NW13 759 aaKnown RBP14.94□□□□□ -0.02
SCN3B-205ENST00000528267 COL20A1Q9P218 1284 aa14.94□□□□□ -0.02
SCN3B-205ENST00000528267 IVNS1ABPQ9Y6Y0 642 aa14.94□□□□□ -0.02
SCN3B-205ENST00000528267 PNMA6FA0A0J9YX94 578 aa14.93□□□□□ -0.02
SCN3B-205ENST00000528267 SOWAHBA6NEL2 793 aa14.93□□□□□ -0.02
SCN3B-205ENST00000528267 STRNO43815 780 aa14.93□□□□□ -0.02
SCN3B-205ENST00000528267 XRCC5P13010 732 aaKnown RBP14.93□□□□□ -0.02
SCN3B-205ENST00000528267 GNAQP50148 359 aa14.93□□□□□ -0.02
SCN3B-205ENST00000528267 ARHGEF6Q15052 776 aa14.93□□□□□ -0.02
SCN3B-205ENST00000528267 ME3Q16798 604 aa14.93□□□□□ -0.02
SCN3B-205ENST00000528267 SYNE3Q6ZMZ3 975 aa14.93□□□□□ -0.02
SCN3B-205ENST00000528267 FAM133AQ8N9E0 248 aa14.93□□□□□ -0.02
SCN3B-205ENST00000528267 PXYLP1Q8TE99 480 aa14.93□□□□□ -0.02
SCN3B-205ENST00000528267 ARMC5Q96C12 935 aa14.93□□□□□ -0.02
SCN3B-205ENST00000528267 ZNF274Q96GC6 653 aaPredicted RBP14.93□□□□□ -0.02
SCN3B-205ENST00000528267 ABHD8Q96I13 439 aa14.93□□□□□ -0.02
SCN3B-205ENST00000528267 MAML3Q96JK9 1138 aa14.93□□□□□ -0.02
SCN3B-205ENST00000528267 ZNF333Q96JL9 665 aa14.93□□□□□ -0.02
SCN3B-205ENST00000528267 LZTS2Q9BRK4 669 aa14.93□□□□□ -0.02
SCN3B-205ENST00000528267 AMNQ9BXJ7 453 aa14.93□□□□□ -0.02
SCN3B-205ENST00000528267 CWC22Q9HCG8 908 aaKnown RBP14.93□□□□□ -0.02
SCN3B-205ENST00000528267 CYP39A1Q9NYL5 469 aa14.93□□□□□ -0.02
SCN3B-205ENST00000528267 ADAMTS3O15072 1205 aa14.92□□□□□ -0.02
SCN3B-205ENST00000528267 CTDNEP1O95476 244 aa14.92□□□□□ -0.02
SCN3B-205ENST00000528267 GRK4P32298 578 aa14.92□□□□□ -0.02
SCN3B-205ENST00000528267 BAATQ14032 418 aaPredicted RBP14.92□□□□□ -0.02
SCN3B-205ENST00000528267 KCTD2Q14681 263 aa14.92□□□□□ -0.02
SCN3B-205ENST00000528267 MTFR1Q15390 333 aa14.92□□□□□ -0.02
SCN3B-205ENST00000528267 PKN1Q16512 942 aa14.92□□□□□ -0.02
SCN3B-205ENST00000528267 NSMFQ6X4W1 530 aa14.92□□□□□ -0.02
SCN3B-205ENST00000528267 TRPV1Q8NER1 839 aa14.92□□□□□ -0.02
SCN3B-205ENST00000528267 GPKOWQ92917 476 aaPredicted RBP eCLIP14.92□□□□□ -0.02
SCN3B-205ENST00000528267 PHKBQ93100 1093 aa14.92□□□□□ -0.02
SCN3B-205ENST00000528267 FBXO40Q9UH90 709 aa14.92□□□□□ -0.02
SCN3B-205ENST00000528267 ABCB11O95342 1321 aa14.92□□□□□ -0.02
SCN3B-205ENST00000528267 PFKFB2O60825 505 aa14.91□□□□□ -0.02
SCN3B-205ENST00000528267 INHAP05111 366 aa14.91□□□□□ -0.02
SCN3B-205ENST00000528267 RPS6P62753 249 aaKnown RBP14.91□□□□□ -0.02
SCN3B-205ENST00000528267 GHRHRQ02643 423 aa14.91□□□□□ -0.02
SCN3B-205ENST00000528267 SLC9C1Q4G0N8 1177 aa14.91□□□□□ -0.02
SCN3B-205ENST00000528267 MAP3K21Q5TCX8 1036 aa14.91□□□□□ -0.02
SCN3B-205ENST00000528267 WWC2Q6AWC2 1192 aa14.91□□□□□ -0.02
SCN3B-205ENST00000528267 ANKRD35Q8N283 1001 aa14.91□□□□□ -0.02
SCN3B-205ENST00000528267 NECAB1Q8N987 351 aa14.91□□□□□ -0.02
SCN3B-205ENST00000528267 SLAIN1Q8ND83 568 aa14.91□□□□□ -0.02
SCN3B-205ENST00000528267 RRP36Q96EU6 259 aaKnown RBP14.91□□□□□ -0.02
SCN3B-205ENST00000528267 PCDHA1Q9Y5I3 950 aa14.91□□□□□ -0.02
SCN3B-205ENST00000528267 MYCP01106 439 aaPredicted RBP14.9□□□□□ -0.02
SCN3B-205ENST00000528267 IFNAR1P17181 557 aa14.9□□□□□ -0.02
SCN3B-205ENST00000528267 CYP2C19P33261 490 aa14.9□□□□□ -0.02
SCN3B-205ENST00000528267 DPP9Q86TI2 863 aa14.9□□□□□ -0.02
SCN3B-205ENST00000528267 V9GY48 417 aaPredicted RBP14.9□□□□□ -0.02
SCN3B-205ENST00000528267 MKI67P46013 3256 aaKnown RBP14.89□□□□□ -0.03
SCN3B-205ENST00000528267 PTPDC1A2A3K4 754 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms