RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	FXR2	P51116	673 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
PGAP2-231	ENST00000528216	MRPL12	P52815	198 aa	Known RBP	11.5	□□□□□ -0.57
PGAP2-231	ENST00000528216	PDIA5	Q14554	519 aa		11.5	□□□□□ -0.57
PGAP2-231	ENST00000528216	SLC4A8	Q2Y0W8	1093 aa		11.5	□□□□□ -0.57
PGAP2-231	ENST00000528216	FOXR2	Q6PJQ5	311 aa		11.5	□□□□□ -0.57
PGAP2-231	ENST00000528216	USP17L2	Q6R6M4	530 aa		11.5	□□□□□ -0.57
PGAP2-231	ENST00000528216	DCAF4	Q8WV16	495 aa		11.5	□□□□□ -0.57
PGAP2-231	ENST00000528216	MKL1	Q969V6	931 aa		11.5	□□□□□ -0.57
PGAP2-231	ENST00000528216	IQCD	Q96DY2	449 aa		11.5	□□□□□ -0.57
PGAP2-231	ENST00000528216	CALML4	Q96GE6	196 aa		11.5	□□□□□ -0.57
PGAP2-231	ENST00000528216	ERO1A	Q96HE7	468 aa		11.5	□□□□□ -0.57
PGAP2-231	ENST00000528216	MED15	Q96RN5	788 aa		11.5	□□□□□ -0.57
PGAP2-231	ENST00000528216	L2HGDH	Q9H9P8	463 aa		11.5	□□□□□ -0.57
PGAP2-231	ENST00000528216	RIC8A	Q9NPQ8	531 aa		11.5	□□□□□ -0.57
PGAP2-231	ENST00000528216	SAMSN1	Q9NSI8	373 aa	Known RBP	11.5	□□□□□ -0.57
PGAP2-231	ENST00000528216	BICDL2	A1A5D9	508 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	USP17L5	A8MUK1	530 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	PSMA7	O14818	248 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	CD44	P16070	742 aa	Known RBP	11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	FECH	P22830	423 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	TRAF1	Q13077	416 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	GLIPR1L2	Q4G1C9	344 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	PPP4R3A	Q6IN85	833 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	CDC42EP5	Q6NZY7	148 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	CNNM4	Q6P4Q7	775 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	APTX	Q7Z2E3	356 aa	Known RBP	11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	CABP7	Q86V35	215 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	FAM114A1	Q8IWE2	563 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	TRMT44	Q8IYL2	757 aa	Known RBP	11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	ADSSL1	Q8N142	457 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	CERS5	Q8N5B7	392 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	IGSF22	Q8N9C0	903 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	TC2N	Q8N9U0	490 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	MTMR8	Q96EF0	704 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	PIGS	Q96S52	555 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	C7orf25	Q9BPX7	421 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	THAP9	Q9H5L6	903 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	NYAP2	Q9P242	653 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	SERPINA10	Q9UK55	444 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	USP27X	A6NNY8	438 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	TMEM232	C9JQI7	657 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	CCNT1	O60563	726 aa	Known RBP	11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	SLU7	O95391	586 aa	Known RBP	11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	GOLGA8H	P0CJ92	632 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	AKR1B1	P15121	316 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	SHMT1	P34896	483 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	CRK	P46108	304 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	PICALM	Q13492	652 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	SEPT2	Q15019	361 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	KARS	Q15046	597 aa	Known RBP	11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	LETM2	Q2VYF4	491 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	KLHL10	Q6JEL2	608 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	SLC51A	Q86UW1	340 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	TMEM139	Q8IV31	216 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	RASGRP4	Q8TDF6	673 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	C7orf43	Q8WVR3	580 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	NELFB	Q8WX92	580 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	CUL5	Q93034	780 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	TMEM60	Q9H2L4	133 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	KANSL2	Q9H9L4	492 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	TRMT1	Q9NXH9	659 aa	Known RBP	11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	CGN	Q9P2M7	1197 aa	Known RBP	11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	PI4KB	Q9UBF8	816 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	CTNND2	Q9UQB3	1225 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216	STK24	Q9Y6E0	443 aa		11.49	□□□□□ -0.57
PGAP2-231	ENST00000528216		A0A1W2PQC6	194 aa		11.48	□□□□□ -0.57
PGAP2-231	ENST00000528216	TUBB2A	Q13885	445 aa		11.48	□□□□□ -0.57
PGAP2-231	ENST00000528216	CCDC93	Q567U6	631 aa		11.48	□□□□□ -0.57
PGAP2-231	ENST00000528216	NAALADL2	Q58DX5	795 aa		11.48	□□□□□ -0.57
PGAP2-231	ENST00000528216	HOMER1	Q86YM7	354 aa		11.48	□□□□□ -0.57
PGAP2-231	ENST00000528216	TBCK	Q8TEA7	893 aa		11.48	□□□□□ -0.57
PGAP2-231	ENST00000528216	MTR	Q99707	1265 aa		11.48	□□□□□ -0.57
PGAP2-231	ENST00000528216	TUBB2B	Q9BVA1	445 aa		11.48	□□□□□ -0.57
PGAP2-231	ENST00000528216	GOLGB1	Q14789	3259 aa	Known RBP	11.48	□□□□□ -0.57
PGAP2-231	ENST00000528216	MYH4	Q9Y623	1939 aa		11.48	□□□□□ -0.57
PGAP2-231	ENST00000528216	PVALEF	A0A1B0GWK0	134 aa		11.47	□□□□□ -0.57
PGAP2-231	ENST00000528216	ZBTB5	O15062	677 aa		11.47	□□□□□ -0.57
PGAP2-231	ENST00000528216	ENTPD3	O75355	529 aa		11.47	□□□□□ -0.57
PGAP2-231	ENST00000528216	FGFR1OP	O95684	399 aa	Known RBP	11.47	□□□□□ -0.57
PGAP2-231	ENST00000528216	CALCRL	Q16602	461 aa		11.47	□□□□□ -0.57
PGAP2-231	ENST00000528216	TCP11X2	Q5H9J9	407 aa		11.47	□□□□□ -0.57
PGAP2-231	ENST00000528216	MOXD1	Q6UVY6	613 aa		11.47	□□□□□ -0.57
PGAP2-231	ENST00000528216	ZNF592	Q92610	1267 aa		11.47	□□□□□ -0.57
PGAP2-231	ENST00000528216	MTMR9	Q96QG7	549 aa		11.47	□□□□□ -0.57
PGAP2-231	ENST00000528216	DDX4	Q9NQI0	724 aa	Known RBP	11.47	□□□□□ -0.57
PGAP2-231	ENST00000528216	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.47	□□□□□ -0.57
PGAP2-231	ENST00000528216	PPP2R2C	Q9Y2T4	447 aa		11.47	□□□□□ -0.57
PGAP2-231	ENST00000528216	ATRNL1	Q5VV63	1379 aa		11.47	□□□□□ -0.57
PGAP2-231	ENST00000528216	ZNF646	O15015	1829 aa	Predicted RBP	11.47	□□□□□ -0.57
PGAP2-231	ENST00000528216	KCNJ18	B7U540	433 aa		11.46	□□□□□ -0.57
PGAP2-231	ENST00000528216	N4BP3	O15049	544 aa		11.46	□□□□□ -0.57
PGAP2-231	ENST00000528216	CCDC175	P0C221	793 aa		11.46	□□□□□ -0.57
PGAP2-231	ENST00000528216	COPB1	P53618	953 aa	Known RBP	11.46	□□□□□ -0.57
PGAP2-231	ENST00000528216	KCNJ12	Q14500	433 aa		11.46	□□□□□ -0.57
PGAP2-231	ENST00000528216	KRT31	Q15323	416 aa		11.46	□□□□□ -0.57
PGAP2-231	ENST00000528216	TMEM179	Q6ZVK1	233 aa		11.46	□□□□□ -0.57
PGAP2-231	ENST00000528216	TMTC1	Q8IUR5	882 aa		11.46	□□□□□ -0.57
PGAP2-231	ENST00000528216	REXO1L1P	Q8IX06	675 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms