RNA–Protein interactions for RNA: ENST00000527906.5

PSMC3-204, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 3

Gene PSMC3, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-204ENST00000527906 KIAA1755Q5JYT7 1200 aa12.62□□□□□ -0.39
PSMC3-204ENST00000527906 FAM177A1Q8N128 213 aaPredicted RBP12.62□□□□□ -0.39
PSMC3-204ENST00000527906 CHURC1Q8WUH1 139 aa12.62□□□□□ -0.39
PSMC3-204ENST00000527906 RNF26Q9BY78 433 aaPredicted RBP12.62□□□□□ -0.39
PSMC3-204ENST00000527906 RIOX1Q9H6W3 641 aa12.62□□□□□ -0.39
PSMC3-204ENST00000527906 NCOA5Q9HCD5 579 aaKnown RBP12.62□□□□□ -0.39
PSMC3-204ENST00000527906 KIF3AQ9Y496 699 aa12.62□□□□□ -0.39
PSMC3-204ENST00000527906 COL6A1P12109 1028 aa12.61□□□□□ -0.39
PSMC3-204ENST00000527906 FOSL2P15408 326 aa12.61□□□□□ -0.39
PSMC3-204ENST00000527906 ADD1P35611 737 aaKnown RBP12.61□□□□□ -0.39
PSMC3-204ENST00000527906 CCT2P78371 535 aaKnown RBP12.61□□□□□ -0.39
PSMC3-204ENST00000527906 ZYXQ15942 572 aaKnown RBP12.61□□□□□ -0.39
PSMC3-204ENST00000527906 LRRC26Q2I0M4 334 aa12.61□□□□□ -0.39
PSMC3-204ENST00000527906 FAM83BQ5T0W9 1011 aa12.61□□□□□ -0.39
PSMC3-204ENST00000527906 CCDC83Q8IWF9 413 aa12.61□□□□□ -0.39
PSMC3-204ENST00000527906 CCDC144CPQ8IYA2 1237 aa12.61□□□□□ -0.39
PSMC3-204ENST00000527906 TRIM22Q8IYM9 498 aa12.61□□□□□ -0.39
PSMC3-204ENST00000527906 SPICE1Q8N0Z3 855 aa12.61□□□□□ -0.39
PSMC3-204ENST00000527906 STAG2Q8N3U4 1231 aa12.61□□□□□ -0.39
PSMC3-204ENST00000527906 ANKRD13CQ8N6S4 541 aa12.61□□□□□ -0.39
PSMC3-204ENST00000527906 NECAB1Q8N987 351 aa12.61□□□□□ -0.39
PSMC3-204ENST00000527906 RGS22Q8NE09 1264 aa12.61□□□□□ -0.39
PSMC3-204ENST00000527906 NSUN7Q8NE18 718 aaKnown RBP12.61□□□□□ -0.39
PSMC3-204ENST00000527906 SMARCC2Q8TAQ2 1214 aa12.61□□□□□ -0.39
PSMC3-204ENST00000527906 AGTPBP1Q9UPW5 1226 aa12.61□□□□□ -0.39
PSMC3-204ENST00000527906 CNTNAP5Q8WYK1 1306 aa12.61□□□□□ -0.39
PSMC3-204ENST00000527906 RLFQ13129 1914 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 USP17L15C9J2P7 530 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 USP17L13C9JLJ4 530 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 TMEM232C9JQI7 657 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 USP17L11C9JVI0 530 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 USP17L18D6R9N7 530 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 USP17L22D6RA61 530 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 USP17L17D6RBQ6 530 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 USP17L19D6RCP7 530 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 USP17L20D6RJB6 530 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 hCG_1984214I3L0E3 225 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 PRPF3O43395 683 aaKnown RBP12.6□□□□□ -0.39
PSMC3-204ENST00000527906 RAD21O60216 631 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 PLEKHA8P1O95397 391 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 CTDNEP1O95476 244 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 HSP90AA1P07900 732 aaKnown RBP12.6□□□□□ -0.39
PSMC3-204ENST00000527906 PDIA4P13667 645 aaKnown RBP12.6□□□□□ -0.39
PSMC3-204ENST00000527906 USP17L24Q0WX57 530 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 TRAF1Q13077 416 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 LBX2Q6XYB7 198 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 GADL1Q6ZQY3 521 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 KCTD1Q719H9 257 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 RAB11FIP4Q86YS3 637 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 SRBD1Q8N5C6 995 aaKnown RBP12.6□□□□□ -0.39
PSMC3-204ENST00000527906 ZNF713Q8N859 430 aaPredicted RBP12.6□□□□□ -0.39
PSMC3-204ENST00000527906 PRPF38AQ8NAV1 312 aaKnown RBP12.6□□□□□ -0.39
PSMC3-204ENST00000527906 WASF1Q92558 559 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 MTMR8Q96EF0 704 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 IPO9Q96P70 1041 aaKnown RBP12.6□□□□□ -0.39
PSMC3-204ENST00000527906 LBHD1Q9BQE6 289 aaPredicted RBP12.6□□□□□ -0.39
PSMC3-204ENST00000527906 SLF1Q9BQI6 1058 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 TTYH1Q9H313 450 aaPredicted RBP12.6□□□□□ -0.39
PSMC3-204ENST00000527906 RPAP3Q9H6T3 665 aaPredicted RBP12.6□□□□□ -0.39
PSMC3-204ENST00000527906 PNMA2Q9UL42 364 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 DOCK3Q8IZD9 2030 aa12.6□□□□□ -0.39
PSMC3-204ENST00000527906 FRMPD2Q68DX3 1309 aaPredicted RBP12.6□□□□□ -0.39
PSMC3-204ENST00000527906 A0A0G2JMZ2 1700 aa12.59□□□□□ -0.39
PSMC3-204ENST00000527906 PTPDC1A2A3K4 754 aa12.59□□□□□ -0.39
PSMC3-204ENST00000527906 DEXIO95424 95 aa12.59□□□□□ -0.39
PSMC3-204ENST00000527906 GOLGA8HP0CJ92 632 aa12.59□□□□□ -0.39
PSMC3-204ENST00000527906 FAM110CQ1W6H9 321 aa12.59□□□□□ -0.39
PSMC3-204ENST00000527906 SYDE2Q5VT97 1194 aa12.59□□□□□ -0.39
PSMC3-204ENST00000527906 CATSPERGQ6ZRH7 1159 aa12.59□□□□□ -0.39
PSMC3-204ENST00000527906 RASGRP2Q7LDG7 609 aa12.59□□□□□ -0.39
PSMC3-204ENST00000527906 TEX2Q8IWB9 1127 aa12.59□□□□□ -0.39
PSMC3-204ENST00000527906 GTF3C2Q8WUA4 911 aaPredicted RBP12.59□□□□□ -0.39
PSMC3-204ENST00000527906 RRP36Q96EU6 259 aaKnown RBP12.59□□□□□ -0.39
PSMC3-204ENST00000527906 NUP88Q99567 741 aaPredicted RBP12.59□□□□□ -0.39
PSMC3-204ENST00000527906 TANGO6Q9C0B7 1094 aa12.59□□□□□ -0.39
PSMC3-204ENST00000527906 CWC22Q9HCG8 908 aaKnown RBP12.59□□□□□ -0.39
PSMC3-204ENST00000527906 GPCPD1Q9NPB8 672 aa12.59□□□□□ -0.39
PSMC3-204ENST00000527906 DAXXQ9UER7 740 aaPredicted RBP12.59□□□□□ -0.39
PSMC3-204ENST00000527906 PPP1R9AQ9ULJ8 1098 aa12.59□□□□□ -0.39
PSMC3-204ENST00000527906 MTMR7Q9Y216 660 aa12.59□□□□□ -0.39
PSMC3-204ENST00000527906 MYH6P13533 1939 aa12.58□□□□□ -0.39
PSMC3-204ENST00000527906 CYTH3O43739 400 aa12.58□□□□□ -0.4
PSMC3-204ENST00000527906 FLOT1O75955 427 aa12.58□□□□□ -0.4
PSMC3-204ENST00000527906 PDCP20941 246 aa12.58□□□□□ -0.4
PSMC3-204ENST00000527906 AKAP17AQ02040 695 aaKnown RBP12.58□□□□□ -0.4
PSMC3-204ENST00000527906 SSRP1Q08945 709 aaKnown RBP12.58□□□□□ -0.4
PSMC3-204ENST00000527906 COG2Q14746 738 aa12.58□□□□□ -0.4
PSMC3-204ENST00000527906 SLC35G1Q2M3R5 365 aa12.58□□□□□ -0.4
PSMC3-204ENST00000527906 TTBK2Q6IQ55 1244 aa12.58□□□□□ -0.4
PSMC3-204ENST00000527906 ADGRF4Q8IZF3 695 aa12.58□□□□□ -0.4
PSMC3-204ENST00000527906 MB21D1Q8N884 522 aa12.58□□□□□ -0.4
PSMC3-204ENST00000527906 TRIB2Q92519 343 aa12.58□□□□□ -0.4
PSMC3-204ENST00000527906 JMJD4Q9H9V9 463 aa12.58□□□□□ -0.4
PSMC3-204ENST00000527906 HOXC10Q9NYD6 342 aa12.58□□□□□ -0.4
PSMC3-204ENST00000527906 SEC63Q9UGP8 760 aaKnown RBP12.58□□□□□ -0.4
PSMC3-204ENST00000527906 GJD2Q9UKL4 321 aa12.58□□□□□ -0.4
PSMC3-204ENST00000527906 PNMA3Q9UL41 463 aa12.58□□□□□ -0.4
PSMC3-204ENST00000527906 PRR12Q9ULL5 1215 aa12.58□□□□□ -0.4
PSMC3-204ENST00000527906 ADAMTS5Q9UNA0 930 aa12.58□□□□□ -0.4
PSMC3-204ENST00000527906 SMC3Q9UQE7 1217 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms