RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 PDLIM7Q9NR12 457 aa16.68■□□□□ 0.26
CAPN1-212ENST00000527887 MTMR7Q9Y216 660 aa16.68■□□□□ 0.26
CAPN1-212ENST00000527887 SOWAHBA6NEL2 793 aa16.67■□□□□ 0.26
CAPN1-212ENST00000527887 CLTBP09497 229 aa16.67■□□□□ 0.26
CAPN1-212ENST00000527887 ZNF543Q08ER8 600 aa16.67■□□□□ 0.26
CAPN1-212ENST00000527887 IQSEC1Q6DN90 963 aa16.67■□□□□ 0.26
CAPN1-212ENST00000527887 TTBK2Q6IQ55 1244 aa16.67■□□□□ 0.26
CAPN1-212ENST00000527887 TBC1D10CQ8IV04 446 aa16.67■□□□□ 0.26
CAPN1-212ENST00000527887 ANKS1AQ92625 1134 aa16.67■□□□□ 0.26
CAPN1-212ENST00000527887 CHMP4CQ96CF2 233 aa16.67■□□□□ 0.26
CAPN1-212ENST00000527887 PRDM5Q9NQX1 630 aaPredicted RBP16.67■□□□□ 0.26
CAPN1-212ENST00000527887 ADD3Q9UEY8 706 aaKnown RBP16.67■□□□□ 0.26
CAPN1-212ENST00000527887 Q9Y3F1 56 aa16.67■□□□□ 0.26
CAPN1-212ENST00000527887 MROH7Q68CQ1 1323 aa16.67■□□□□ 0.26
CAPN1-212ENST00000527887 DCDC2CA8MYV0 355 aa16.66■□□□□ 0.26
CAPN1-212ENST00000527887 KIAA0355O15063 1070 aa16.66■□□□□ 0.26
CAPN1-212ENST00000527887 C6orf222P0C671 652 aaPredicted RBP16.66■□□□□ 0.26
CAPN1-212ENST00000527887 SLC16A2P36021 539 aa16.66■□□□□ 0.26
CAPN1-212ENST00000527887 TNFAIP2Q03169 654 aa16.66■□□□□ 0.26
CAPN1-212ENST00000527887 MUM1L1Q5H9M0 696 aa16.66■□□□□ 0.26
CAPN1-212ENST00000527887 MORC4Q8TE76 937 aa16.66■□□□□ 0.26
CAPN1-212ENST00000527887 SEZ6LQ9BYH1 1024 aa16.66■□□□□ 0.26
CAPN1-212ENST00000527887 CNNM2Q9H8M5 875 aa16.66■□□□□ 0.26
CAPN1-212ENST00000527887 GPCPD1Q9NPB8 672 aa16.66■□□□□ 0.26
CAPN1-212ENST00000527887 WDR19Q8NEZ3 1342 aa16.66■□□□□ 0.26
CAPN1-212ENST00000527887 SNAP25P60880 206 aa16.65■□□□□ 0.26
CAPN1-212ENST00000527887 GNASQ5JWF2 1037 aa16.65■□□□□ 0.26
CAPN1-212ENST00000527887 NSMFQ6X4W1 530 aa16.65■□□□□ 0.26
CAPN1-212ENST00000527887 LENG1Q96BZ8 264 aaPredicted RBP16.65■□□□□ 0.26
CAPN1-212ENST00000527887 MPHOSPH6Q99547 160 aaKnown RBP16.65■□□□□ 0.26
CAPN1-212ENST00000527887 KRT23Q9C075 422 aa16.65■□□□□ 0.26
CAPN1-212ENST00000527887 VTA1Q9NP79 307 aa16.65■□□□□ 0.26
CAPN1-212ENST00000527887 FRMPD2Q68DX3 1309 aaPredicted RBP16.65■□□□□ 0.26
CAPN1-212ENST00000527887 PLXNA1Q9UIW2 1896 aa16.65■□□□□ 0.26
CAPN1-212ENST00000527887 TRIM43BA6NCK2 446 aa16.64■□□□□ 0.25
CAPN1-212ENST00000527887 B4DLN1 442 aa16.64■□□□□ 0.25
CAPN1-212ENST00000527887 ZEB2O60315 1214 aa16.64■□□□□ 0.25
CAPN1-212ENST00000527887 PQBP1O60828 265 aaKnown RBP16.64■□□□□ 0.25
CAPN1-212ENST00000527887 CABYRO75952 493 aa16.64■□□□□ 0.25
CAPN1-212ENST00000527887 ASGR1P07306 291 aa16.64■□□□□ 0.25
CAPN1-212ENST00000527887 CDK7P50613 346 aa16.64■□□□□ 0.25
CAPN1-212ENST00000527887 MRPL12P52815 198 aaKnown RBP16.64■□□□□ 0.25
CAPN1-212ENST00000527887 FAM109BQ6ICB4 259 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-212ENST00000527887 RASGRP2Q7LDG7 609 aa16.64■□□□□ 0.25
CAPN1-212ENST00000527887 RGS22Q8NE09 1264 aa16.64■□□□□ 0.25
CAPN1-212ENST00000527887 RUFY2Q8WXA3 655 aa16.64■□□□□ 0.25
CAPN1-212ENST00000527887 BADQ92934 168 aa16.64■□□□□ 0.25
CAPN1-212ENST00000527887 TRIM43Q96BQ3 446 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-212ENST00000527887 AP5M1Q9H0R1 490 aa16.64■□□□□ 0.25
CAPN1-212ENST00000527887 KAT14Q9H8E8 782 aa16.64■□□□□ 0.25
CAPN1-212ENST00000527887 TMEM39AQ9NV64 488 aa16.64■□□□□ 0.25
CAPN1-212ENST00000527887 GNEQ9Y223 722 aaKnown RBP16.64■□□□□ 0.25
CAPN1-212ENST00000527887 NEDD4P46934 1319 aa16.64■□□□□ 0.25
CAPN1-212ENST00000527887 RAD50Q92878 1312 aa16.64■□□□□ 0.25
CAPN1-212ENST00000527887 KDM4AO75164 1064 aa16.63■□□□□ 0.25
CAPN1-212ENST00000527887 RAG1P15918 1043 aa16.63■□□□□ 0.25
CAPN1-212ENST00000527887 BAATQ14032 418 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-212ENST00000527887 TTC22Q5TAA0 569 aa16.63■□□□□ 0.25
CAPN1-212ENST00000527887 NOL8Q76FK4 1167 aaKnown RBP16.63■□□□□ 0.25
CAPN1-212ENST00000527887 SH3RF1Q7Z6J0 888 aa16.63■□□□□ 0.25
CAPN1-212ENST00000527887 DEFB123Q8N688 67 aa16.63■□□□□ 0.25
CAPN1-212ENST00000527887 PNMA1Q8ND90 353 aa16.63■□□□□ 0.25
CAPN1-212ENST00000527887 VTI1AQ96AJ9 217 aa16.63■□□□□ 0.25
CAPN1-212ENST00000527887 ZSCAN10Q96SZ4 725 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-212ENST00000527887 PPP4R2Q9NY27 417 aa16.63■□□□□ 0.25
CAPN1-212ENST00000527887 ZSWIM5Q9P217 1185 aa16.63■□□□□ 0.25
CAPN1-212ENST00000527887 SMCHD1A6NHR9 2005 aa16.63■□□□□ 0.25
CAPN1-212ENST00000527887 A0A0U1RQG5 324 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-212ENST00000527887 ARVCFO00192 962 aa16.62■□□□□ 0.25
CAPN1-212ENST00000527887 ADCY6O43306 1168 aa16.62■□□□□ 0.25
CAPN1-212ENST00000527887 FAAP100Q0VG06 881 aa16.62■□□□□ 0.25
CAPN1-212ENST00000527887 ASPRV1Q53RT3 343 aa16.62■□□□□ 0.25
CAPN1-212ENST00000527887 TAPT1Q6NXT6 567 aa16.62■□□□□ 0.25
CAPN1-212ENST00000527887 DNERQ8NFT8 737 aa16.62■□□□□ 0.25
CAPN1-212ENST00000527887 CLEC4DQ8WXI8 215 aa16.62■□□□□ 0.25
CAPN1-212ENST00000527887 ZKSCAN3Q9BRR0 538 aa16.62■□□□□ 0.25
CAPN1-212ENST00000527887 ASTN1O14525 1302 aa16.62■□□□□ 0.25
CAPN1-212ENST00000527887 LAMA2P24043 3122 aaKnown RBP16.62■□□□□ 0.25
CAPN1-212ENST00000527887 PTPDC1A2A3K4 754 aa16.61■□□□□ 0.25
CAPN1-212ENST00000527887 MYADML2A6NDP7 307 aa16.61■□□□□ 0.25
CAPN1-212ENST00000527887 B4E1Z4 1266 aa16.61■□□□□ 0.25
CAPN1-212ENST00000527887 NFIBO00712 420 aa16.61■□□□□ 0.25
CAPN1-212ENST00000527887 CTAGE5O15320 804 aa16.61■□□□□ 0.25
CAPN1-212ENST00000527887 TLR3O15455 904 aaKnown RBP16.61■□□□□ 0.25
CAPN1-212ENST00000527887 PDE4AP27815 886 aa16.61■□□□□ 0.25
CAPN1-212ENST00000527887 ALDH5A1P51649 535 aaPredicted RBP16.61■□□□□ 0.25
CAPN1-212ENST00000527887 RNF207Q6ZRF8 634 aa16.61■□□□□ 0.25
CAPN1-212ENST00000527887 TLK2Q86UE8 772 aa16.61■□□□□ 0.25
CAPN1-212ENST00000527887 UBAC1Q9BSL1 405 aa16.61■□□□□ 0.25
CAPN1-212ENST00000527887 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-212ENST00000527887 RBM47A0AV96 593 aaKnown RBP16.6■□□□□ 0.25
CAPN1-212ENST00000527887 DYNC1LI2O43237 492 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-212ENST00000527887 TIMP1P01033 207 aa16.6■□□□□ 0.25
CAPN1-212ENST00000527887 GSPT1P15170 499 aaKnown RBP16.6■□□□□ 0.25
CAPN1-212ENST00000527887 SMPD1P17405 629 aa16.6■□□□□ 0.25
CAPN1-212ENST00000527887 TRDNQ13061 729 aa16.6■□□□□ 0.25
CAPN1-212ENST00000527887 SHHQ15465 462 aa16.6■□□□□ 0.25
CAPN1-212ENST00000527887 FSCN1Q16658 493 aaKnown RBP16.6■□□□□ 0.25
CAPN1-212ENST00000527887 DUSP28Q4G0W2 176 aa16.6■□□□□ 0.25
CAPN1-212ENST00000527887 KIAA1211Q6ZU35 1233 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms