RNA–Protein interactions for RNA: ENST00000527805.5

ATM-212, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-212ENST00000527805 BIRC3Q13489 604 aa16.54■□□□□ 0.24
ATM-212ENST00000527805 NELFBQ8WX92 580 aa16.54■□□□□ 0.24
ATM-212ENST00000527805 FEM1BQ9UK73 627 aa16.54■□□□□ 0.24
ATM-212ENST00000527805 TRPC6Q9Y210 931 aa16.54■□□□□ 0.24
ATM-212ENST00000527805 CALUO43852 315 aaPredicted RBP16.54■□□□□ 0.24
ATM-212ENST00000527805 HSP90B2PQ58FF3 399 aa16.54■□□□□ 0.24
ATM-212ENST00000527805 C16orf86Q6ZW13 317 aa16.54■□□□□ 0.24
ATM-212ENST00000527805 TMEM87AQ8NBN3 555 aa16.54■□□□□ 0.24
ATM-212ENST00000527805 PRMT6Q96LA8 375 aaPredicted RBP16.54■□□□□ 0.24
ATM-212ENST00000527805 RAVER2Q9HCJ3 691 aaKnown RBP16.54■□□□□ 0.24
ATM-212ENST00000527805 PEAK1Q9H792 1746 aa16.54■□□□□ 0.24
ATM-212ENST00000527805 USP17L15C9J2P7 530 aa16.54■□□□□ 0.24
ATM-212ENST00000527805 USP17L13C9JLJ4 530 aa16.54■□□□□ 0.24
ATM-212ENST00000527805 USP17L11C9JVI0 530 aa16.54■□□□□ 0.24
ATM-212ENST00000527805 USP17L18D6R9N7 530 aa16.54■□□□□ 0.24
ATM-212ENST00000527805 USP17L22D6RA61 530 aa16.54■□□□□ 0.24
ATM-212ENST00000527805 USP17L17D6RBQ6 530 aa16.54■□□□□ 0.24
ATM-212ENST00000527805 USP17L19D6RCP7 530 aa16.54■□□□□ 0.24
ATM-212ENST00000527805 USP17L20D6RJB6 530 aa16.54■□□□□ 0.24
ATM-212ENST00000527805 TM4SF1P30408 202 aa16.54■□□□□ 0.24
ATM-212ENST00000527805 USP17L24Q0WX57 530 aa16.54■□□□□ 0.24
ATM-212ENST00000527805 USP17L6PQ6QN14 398 aa16.54■□□□□ 0.24
ATM-212ENST00000527805 DHX37Q8IY37 1157 aaKnown RBP16.54■□□□□ 0.24
ATM-212ENST00000527805 QRICH1Q2TAL8 776 aa16.53■□□□□ 0.24
ATM-212ENST00000527805 IQCEQ6IPM2 695 aa16.53■□□□□ 0.24
ATM-212ENST00000527805 SEPT14Q6ZU15 432 aa16.53■□□□□ 0.24
ATM-212ENST00000527805 EEPD1Q7L9B9 569 aa16.53■□□□□ 0.24
ATM-212ENST00000527805 WTIPA6NIX2 430 aaPredicted RBP16.53■□□□□ 0.24
ATM-212ENST00000527805 CASQ1P31415 396 aa16.53■□□□□ 0.24
ATM-212ENST00000527805 UTP14CQ5TAP6 766 aaKnown RBP16.53■□□□□ 0.24
ATM-212ENST00000527805 PRPF38AQ8NAV1 312 aaKnown RBP16.53■□□□□ 0.24
ATM-212ENST00000527805 DEFB129Q9H1M3 183 aa16.53■□□□□ 0.24
ATM-212ENST00000527805 PNMA3Q9UL41 463 aa16.53■□□□□ 0.24
ATM-212ENST00000527805 EXOC3O60645 756 aa16.53■□□□□ 0.24
ATM-212ENST00000527805 ANTXR2P58335 489 aa16.53■□□□□ 0.24
ATM-212ENST00000527805 FANCCQ00597 558 aa16.53■□□□□ 0.24
ATM-212ENST00000527805 ADGRF4Q8IZF3 695 aa16.53■□□□□ 0.24
ATM-212ENST00000527805 RIOK1Q9BRS2 568 aaKnown RBP16.53■□□□□ 0.24
ATM-212ENST00000527805 HACL1Q9UJ83 578 aa16.53■□□□□ 0.24
ATM-212ENST00000527805 ZNF142P52746 1687 aaPredicted RBP16.53■□□□□ 0.24
ATM-212ENST00000527805 GTPBP6O43824 516 aaPredicted RBP16.53■□□□□ 0.24
ATM-212ENST00000527805 IL1R1P14778 569 aa16.53■□□□□ 0.24
ATM-212ENST00000527805 CXCL9Q07325 125 aa16.53■□□□□ 0.24
ATM-212ENST00000527805 GOLGA6L9A6NEM1 432 aa16.52■□□□□ 0.24
ATM-212ENST00000527805 TMCO5BA8MYB1 307 aa16.52■□□□□ 0.24
ATM-212ENST00000527805 NFIAQ12857 509 aa16.52■□□□□ 0.24
ATM-212ENST00000527805 FAM102BQ5T8I3 360 aa16.52■□□□□ 0.24
ATM-212ENST00000527805 RNF207Q6ZRF8 634 aa16.52■□□□□ 0.24
ATM-212ENST00000527805 LRP10Q7Z4F1 713 aa16.52■□□□□ 0.24
ATM-212ENST00000527805 CCDC42Q96M95 316 aa16.52■□□□□ 0.24
ATM-212ENST00000527805 AK8Q96MA6 479 aa16.52■□□□□ 0.24
ATM-212ENST00000527805 PCDHA5Q9Y5H7 936 aa16.52■□□□□ 0.24
ATM-212ENST00000527805 METTL13Q8N6R0 699 aa16.52■□□□□ 0.24
ATM-212ENST00000527805 OXER1Q8TDS5 423 aa16.52■□□□□ 0.24
ATM-212ENST00000527805 ALS2CR12Q96Q35 445 aa16.52■□□□□ 0.24
ATM-212ENST00000527805 PODXL2Q9NZ53 605 aa16.52■□□□□ 0.24
ATM-212ENST00000527805 ROBO1Q9Y6N7 1651 aa16.52■□□□□ 0.24
ATM-212ENST00000527805 HMGCS2P54868 508 aa16.52■□□□□ 0.23
ATM-212ENST00000527805 RAPGEF1Q13905 1077 aa16.52■□□□□ 0.23
ATM-212ENST00000527805 WDR11Q9BZH6 1224 aa16.52■□□□□ 0.23
ATM-212ENST00000527805 GNG11P61952 73 aa16.52■□□□□ 0.23
ATM-212ENST00000527805 SNW1Q13573 536 aaKnown RBP16.52■□□□□ 0.23
ATM-212ENST00000527805 SRBD1Q8N5C6 995 aaKnown RBP16.52■□□□□ 0.23
ATM-212ENST00000527805 SUGCTQ9HAC7 445 aa16.52■□□□□ 0.23
ATM-212ENST00000527805 LTN1O94822 1766 aa16.51■□□□□ 0.23
ATM-212ENST00000527805 TTBK2Q6IQ55 1244 aa16.51■□□□□ 0.23
ATM-212ENST00000527805 UBXN4Q92575 508 aa16.51■□□□□ 0.23
ATM-212ENST00000527805 LARSQ9P2J5 1176 aaKnown RBP16.51■□□□□ 0.23
ATM-212ENST00000527805 RABGAP1Q9Y3P9 1069 aa16.51■□□□□ 0.23
ATM-212ENST00000527805 SNRNP48Q6IEG0 339 aaKnown RBP16.51■□□□□ 0.23
ATM-212ENST00000527805 VGLL2Q8N8G2 317 aa16.51■□□□□ 0.23
ATM-212ENST00000527805 ZFP91Q96JP5 570 aaPredicted RBP16.51■□□□□ 0.23
ATM-212ENST00000527805 SRRTQ9BXP5 876 aaKnown RBP16.51■□□□□ 0.23
ATM-212ENST00000527805 TAB2Q9NYJ8 693 aa16.51■□□□□ 0.23
ATM-212ENST00000527805 MRC1P22897 1456 aa16.51■□□□□ 0.23
ATM-212ENST00000527805 RASSF7Q02833 373 aa16.51■□□□□ 0.23
ATM-212ENST00000527805 FAM47CQ5HY64 1035 aa16.51■□□□□ 0.23
ATM-212ENST00000527805 APBB1IPQ7Z5R6 666 aaPredicted RBP16.51■□□□□ 0.23
ATM-212ENST00000527805 MYOCDQ8IZQ8 938 aa16.51■□□□□ 0.23
ATM-212ENST00000527805 CDHR1Q96JP9 859 aa16.51■□□□□ 0.23
ATM-212ENST00000527805 ZDHHC15Q96MV8 337 aa16.51■□□□□ 0.23
ATM-212ENST00000527805 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.51■□□□□ 0.23
ATM-212ENST00000527805 SRPRBQ9Y5M8 271 aaKnown RBP16.51■□□□□ 0.23
ATM-212ENST00000527805 AP3B2Q13367 1082 aa16.5■□□□□ 0.23
ATM-212ENST00000527805 ADGRA1Q86SQ6 560 aa16.5■□□□□ 0.23
ATM-212ENST00000527805 IGSF22Q8N9C0 903 aa16.5■□□□□ 0.23
ATM-212ENST00000527805 DEPTORQ8TB45 409 aa16.5■□□□□ 0.23
ATM-212ENST00000527805 LARP4BQ92615 738 aaKnown RBP16.5■□□□□ 0.23
ATM-212ENST00000527805 SYNCQ9H7C4 482 aa16.5■□□□□ 0.23
ATM-212ENST00000527805 SENP2Q9HC62 589 aa16.5■□□□□ 0.23
ATM-212ENST00000527805 PANK4Q9NVE7 773 aa16.5■□□□□ 0.23
ATM-212ENST00000527805 BARHL2Q9NY43 387 aa16.5■□□□□ 0.23
ATM-212ENST00000527805 ERLIN2O94905 339 aa16.5■□□□□ 0.23
ATM-212ENST00000527805 NDUFB10O96000 172 aa16.5■□□□□ 0.23
ATM-212ENST00000527805 PCDHA6Q9UN73 950 aa16.5■□□□□ 0.23
ATM-212ENST00000527805 PCDHA8Q9Y5H6 950 aa16.5■□□□□ 0.23
ATM-212ENST00000527805 MACROD2A1Z1Q3 448 aa16.5■□□□□ 0.23
ATM-212ENST00000527805 FAM178BQ8IXR5 827 aa16.5■□□□□ 0.23
ATM-212ENST00000527805 SLC39A2Q9NP94 309 aa16.5■□□□□ 0.23
ATM-212ENST00000527805 KCNG1Q9UIX4 513 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms